RNA–Protein interactions for RNA: ENST00000428482.5

HDLBP-216, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-216ENST00000428482 NOTUMQ6P988 496 aa11.31□□□□□ -0.6
HDLBP-216ENST00000428482 KCNT2Q6UVM3 1135 aa11.31□□□□□ -0.6
HDLBP-216ENST00000428482 EP400NLQ6ZTU2 488 aa11.31□□□□□ -0.6
HDLBP-216ENST00000428482 BRAPQ7Z569 592 aa11.31□□□□□ -0.6
HDLBP-216ENST00000428482 RBM23Q86U06 439 aaKnown RBP11.31□□□□□ -0.6
HDLBP-216ENST00000428482 P2RX5Q93086 422 aa11.31□□□□□ -0.6
HDLBP-216ENST00000428482 ASB2Q96Q27 587 aa11.31□□□□□ -0.6
HDLBP-216ENST00000428482 GAD1Q99259 594 aa11.31□□□□□ -0.6
HDLBP-216ENST00000428482 PLVAPQ9BX97 442 aa11.31□□□□□ -0.6
HDLBP-216ENST00000428482 CSRNP2Q9H175 543 aa11.31□□□□□ -0.6
HDLBP-216ENST00000428482 IGFLR1Q9H665 355 aa11.31□□□□□ -0.6
HDLBP-216ENST00000428482 MIOSQ9NXC5 875 aa11.31□□□□□ -0.6
HDLBP-216ENST00000428482 DACT1Q9NYF0 836 aa11.31□□□□□ -0.6
HDLBP-216ENST00000428482 PRG3Q9Y2Y8 225 aaPredicted RBP11.31□□□□□ -0.6
HDLBP-216ENST00000428482 ZDHHC9Q9Y397 364 aa11.31□□□□□ -0.6
HDLBP-216ENST00000428482 RWDD3Q9Y3V2 267 aa11.31□□□□□ -0.6
HDLBP-216ENST00000428482 SFI1A8K8P3 1242 aa11.3□□□□□ -0.6
HDLBP-216ENST00000428482 PLA2G4BP0C869 781 aa11.3□□□□□ -0.6
HDLBP-216ENST00000428482 HARSP12081 509 aaKnown RBP11.3□□□□□ -0.6
HDLBP-216ENST00000428482 NCLP19338 710 aaKnown RBP11.3□□□□□ -0.6
HDLBP-216ENST00000428482 IGFBP6P24592 240 aaPredicted RBP11.3□□□□□ -0.6
HDLBP-216ENST00000428482 NAMPTP43490 491 aa11.3□□□□□ -0.6
HDLBP-216ENST00000428482 RAB27AP51159 221 aa11.3□□□□□ -0.6
HDLBP-216ENST00000428482 PEX3P56589 373 aa11.3□□□□□ -0.6
HDLBP-216ENST00000428482 DHX8Q14562 1220 aaKnown RBP11.3□□□□□ -0.6
HDLBP-216ENST00000428482 MCM6Q14566 821 aa11.3□□□□□ -0.6
HDLBP-216ENST00000428482 MXD4Q14582 209 aaPredicted RBP11.3□□□□□ -0.6
HDLBP-216ENST00000428482 COL19A1Q14993 1142 aa11.3□□□□□ -0.6
HDLBP-216ENST00000428482 PTPROQ16827 1216 aa11.3□□□□□ -0.6
HDLBP-216ENST00000428482 NOMO2Q5JPE7 1267 aa11.3□□□□□ -0.6
HDLBP-216ENST00000428482 GLRA4Q5JXX5 417 aa11.3□□□□□ -0.6
HDLBP-216ENST00000428482 C1orf186Q6ZWK4 172 aa11.3□□□□□ -0.6
HDLBP-216ENST00000428482 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.3□□□□□ -0.6
HDLBP-216ENST00000428482 DEPTORQ8TB45 409 aa11.3□□□□□ -0.6
HDLBP-216ENST00000428482 SYMPKQ92797 1274 aaKnown RBP11.3□□□□□ -0.6
HDLBP-216ENST00000428482 KHSRPQ92945 711 aaKnown RBP eCLIP11.3□□□□□ -0.65e-7■□□□□ 9.6
HDLBP-216ENST00000428482 EPSTI1Q96J88 318 aa11.3□□□□□ -0.6
HDLBP-216ENST00000428482 ZNF558Q96NG5 402 aa11.3□□□□□ -0.6
HDLBP-216ENST00000428482 REEP2Q9BRK0 252 aa11.3□□□□□ -0.6
HDLBP-216ENST00000428482 PAAF1Q9BRP4 392 aa11.3□□□□□ -0.6
HDLBP-216ENST00000428482 TRAIPQ9BWF2 469 aa11.3□□□□□ -0.6
HDLBP-216ENST00000428482 NFKBIZQ9BYH8 718 aa11.3□□□□□ -0.6
HDLBP-216ENST00000428482 ZBP1Q9H171 429 aa11.3□□□□□ -0.6
HDLBP-216ENST00000428482 IKZF4Q9H2S9 585 aa11.3□□□□□ -0.6
HDLBP-216ENST00000428482 TLR9Q9NR96 1032 aa11.3□□□□□ -0.6
HDLBP-216ENST00000428482 CHST12Q9NRB3 414 aa11.3□□□□□ -0.6
HDLBP-216ENST00000428482 BDP1A6H8Y1 2624 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 ARL5CA6NH57 179 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 ABLIM1O14639 778 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 PTGESO14684 152 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 SLC16A4O15374 487 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 HOXA2O43364 376 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 RECQL4O94761 1208 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 RB1P06400 928 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 NPTX2P47972 431 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 ARSHQ5FYA8 562 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 LLGL2Q6P1M3 1020 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 GLB1LQ6UWU2 654 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 GPBP1Q86WP2 473 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 ZBTB8OSQ8IWT0 167 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 GSTCDQ8NEC7 633 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 HASPINQ8TF76 798 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 MRPS27Q92552 414 aaKnown RBP11.29□□□□□ -0.6
HDLBP-216ENST00000428482 HLA-CQ95604 372 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 B3GALT6Q96L58 329 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 UHRF1Q96T88 793 aaPredicted RBP11.29□□□□□ -0.6
HDLBP-216ENST00000428482 TCF25Q9BQ70 676 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 APOL5Q9BWW9 433 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 MRPL9Q9BYD2 267 aaKnown RBP11.29□□□□□ -0.6
HDLBP-216ENST00000428482 FGFBP2Q9BYJ0 223 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 RAB34Q9BZG1 259 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 LMAN2LQ9H0V9 348 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 CDT1Q9H211 546 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 FZD8Q9H461 694 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 CD320Q9NPF0 282 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 ENTPD7Q9NQZ7 604 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 SNTG2Q9NY99 539 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 LMCD1Q9NZU5 365 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 ARHGAP28Q9P2N2 729 aa11.29□□□□□ -0.6
HDLBP-216ENST00000428482 GRXCR2A6NFK2 248 aa11.28□□□□□ -0.6
HDLBP-216ENST00000428482 CASTOR2A6NHX0 329 aa11.28□□□□□ -0.6
HDLBP-216ENST00000428482 TISP43B9A030 160 aa11.28□□□□□ -0.6
HDLBP-216ENST00000428482 ZNF623O75123 536 aa11.28□□□□□ -0.6
HDLBP-216ENST00000428482 EOMESO95936 686 aa11.28□□□□□ -0.6
HDLBP-216ENST00000428482 GALTP07902 379 aa11.28□□□□□ -0.6
HDLBP-216ENST00000428482 ZSCAN22P10073 491 aaPredicted RBP11.28□□□□□ -0.6
HDLBP-216ENST00000428482 BMP1P13497 986 aa11.28□□□□□ -0.6
HDLBP-216ENST00000428482 ITGA4P13612 1032 aa11.28□□□□□ -0.6
HDLBP-216ENST00000428482 MUTP22033 750 aa11.28□□□□□ -0.6
HDLBP-216ENST00000428482 CA8P35219 290 aa11.28□□□□□ -0.6
HDLBP-216ENST00000428482 MRPS5P82675 430 aaKnown RBP11.28□□□□□ -0.6
HDLBP-216ENST00000428482 PRPF4BQ13523 1007 aaKnown RBP11.28□□□□□ -0.6
HDLBP-216ENST00000428482 PDIA5Q14554 519 aa11.28□□□□□ -0.6
HDLBP-216ENST00000428482 SEZ6Q53EL9 994 aa11.28□□□□□ -0.6
HDLBP-216ENST00000428482 NAALADL2Q58DX5 795 aa11.28□□□□□ -0.6
HDLBP-216ENST00000428482 ARL6IP4Q66PJ3 421 aaKnown RBP11.28□□□□□ -0.6
HDLBP-216ENST00000428482 ATL3Q6DD88 541 aa11.28□□□□□ -0.6
HDLBP-216ENST00000428482 SLC27A1Q6PCB7 646 aa11.28□□□□□ -0.6
HDLBP-216ENST00000428482 MRPL10Q7Z7H8 261 aaKnown RBP11.28□□□□□ -0.6
HDLBP-216ENST00000428482 ZNF710Q8N1W2 664 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms