RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ITGA4P13612 1032 aa18.46■□□□□ 0.55
VARS-216ENST00000428445 RFC5P40937 340 aa18.46■□□□□ 0.55
VARS-216ENST00000428445 SPIRE1Q08AE8 756 aa18.46■□□□□ 0.55
VARS-216ENST00000428445 NR5A1Q13285 461 aa18.46■□□□□ 0.55
VARS-216ENST00000428445 ASTLQ6HA08 431 aaPredicted RBP18.46■□□□□ 0.55
VARS-216ENST00000428445 PPFIBP1Q86W92 1011 aa18.46■□□□□ 0.55
VARS-216ENST00000428445 COLGALT2Q8IYK4 626 aa18.46■□□□□ 0.55
VARS-216ENST00000428445 ST13P5Q8NFI4 369 aaPredicted RBP18.46■□□□□ 0.55
VARS-216ENST00000428445 ASAP3Q8TDY4 903 aa18.46■□□□□ 0.55
VARS-216ENST00000428445 RSAD2Q8WXG1 361 aa18.46■□□□□ 0.55
VARS-216ENST00000428445 TMEM175Q9BSA9 504 aa18.46■□□□□ 0.55
VARS-216ENST00000428445 MFSD1Q9H3U5 465 aa18.46■□□□□ 0.55
VARS-216ENST00000428445 CACNG4Q9UBN1 327 aa18.46■□□□□ 0.55
VARS-216ENST00000428445 USTQ9Y2C2 406 aa18.46■□□□□ 0.55
VARS-216ENST00000428445 TDRD15B5MCY1 1934 aaKnown RBP18.45■□□□□ 0.54
VARS-216ENST00000428445 ARL5CA6NH57 179 aa18.45■□□□□ 0.54
VARS-216ENST00000428445 WNT7AO00755 349 aa18.45■□□□□ 0.54
VARS-216ENST00000428445 TEX28O15482 410 aa18.45■□□□□ 0.54
VARS-216ENST00000428445 NARSO43776 548 aaKnown RBP18.45■□□□□ 0.54
VARS-216ENST00000428445 DKC1O60832 514 aaKnown RBP eCLIP18.45■□□□□ 0.54
VARS-216ENST00000428445 SOD2P04179 222 aa18.45■□□□□ 0.54
VARS-216ENST00000428445 NPR3P17342 541 aa18.45■□□□□ 0.54
VARS-216ENST00000428445 MLH1P40692 756 aa18.45■□□□□ 0.54
VARS-216ENST00000428445 SCNN1GP51170 649 aa18.45■□□□□ 0.54
VARS-216ENST00000428445 FOSBP53539 338 aa18.45■□□□□ 0.54
VARS-216ENST00000428445 CWF19L1Q69YN2 538 aaKnown RBP18.45■□□□□ 0.54
VARS-216ENST00000428445 CCDC149Q6ZUS6 474 aa18.45■□□□□ 0.54
VARS-216ENST00000428445 RSPH1Q8WYR4 309 aa18.45■□□□□ 0.54
VARS-216ENST00000428445 MTRQ99707 1265 aa18.45■□□□□ 0.54
VARS-216ENST00000428445 KCNK12Q9HB15 430 aa18.45■□□□□ 0.54
VARS-216ENST00000428445 MAN1C1Q9NR34 630 aa18.45■□□□□ 0.54
VARS-216ENST00000428445 KANSL3Q9P2N6 904 aa18.45■□□□□ 0.54
VARS-216ENST00000428445 CCDC195A0A1B0GUA6 201 aa18.44■□□□□ 0.54
VARS-216ENST00000428445 INO80B-WBP1J3KQ70 363 aa18.44■□□□□ 0.54
VARS-216ENST00000428445 RFPL2O75678 378 aa18.44■□□□□ 0.54
VARS-216ENST00000428445 ERLIN2O94905 339 aa18.44■□□□□ 0.54
VARS-216ENST00000428445 AKAP5P24588 427 aa18.44■□□□□ 0.54
VARS-216ENST00000428445 PTENP60484 403 aa18.44■□□□□ 0.54
VARS-216ENST00000428445 OTUD6AQ7L8S5 288 aa18.44■□□□□ 0.54
VARS-216ENST00000428445 GLYCTKQ8IVS8 523 aa18.44■□□□□ 0.54
VARS-216ENST00000428445 NECAB1Q8N987 351 aa18.44■□□□□ 0.54
VARS-216ENST00000428445 TCP11Q8WWU5 503 aa18.44■□□□□ 0.54
VARS-216ENST00000428445 ACSF2Q96CM8 615 aaPredicted RBP18.44■□□□□ 0.54
VARS-216ENST00000428445 RPS6KC1Q96S38 1066 aa18.44■□□□□ 0.54
VARS-216ENST00000428445 EIF2AK1Q9BQI3 630 aaKnown RBP18.44■□□□□ 0.54
VARS-216ENST00000428445 ZSWIM4Q9H7M6 989 aa18.44■□□□□ 0.54
VARS-216ENST00000428445 KLK14Q9P0G3 267 aa18.44■□□□□ 0.54
VARS-216ENST00000428445 CNTNAP2Q9UHC6 1331 aa18.44■□□□□ 0.54
VARS-216ENST00000428445 DOCK6Q96HP0 2047 aa18.44■□□□□ 0.54
VARS-216ENST00000428445 PTPRZ1P23471 2315 aaPredicted RBP18.43■□□□□ 0.54
VARS-216ENST00000428445 TBX3O15119 743 aa18.43■□□□□ 0.54
VARS-216ENST00000428445 ASAP2O43150 1006 aa18.43■□□□□ 0.54
VARS-216ENST00000428445 B4GALT5O43286 388 aa18.43■□□□□ 0.54
VARS-216ENST00000428445 PFKFB2O60825 505 aa18.43■□□□□ 0.54
VARS-216ENST00000428445 URODP06132 367 aa18.43■□□□□ 0.54
VARS-216ENST00000428445 FDPSP14324 419 aaKnown RBP18.43■□□□□ 0.54
VARS-216ENST00000428445 GCFC2P16383 781 aaKnown RBP18.43■□□□□ 0.54
VARS-216ENST00000428445 TDGQ13569 410 aa18.43■□□□□ 0.54
VARS-216ENST00000428445 KIAA0319Q5VV43 1072 aa18.43■□□□□ 0.54
VARS-216ENST00000428445 POTEGQ6S5H5 508 aa18.43■□□□□ 0.54
VARS-216ENST00000428445 OTOP3Q7RTS5 596 aa18.43■□□□□ 0.54
VARS-216ENST00000428445 PALB2Q86YC2 1186 aa18.43■□□□□ 0.54
VARS-216ENST00000428445 HERC2P3Q9BVR0 1158 aa18.43■□□□□ 0.54
VARS-216ENST00000428445 NXF3Q9H4D5 531 aaKnown RBP18.43■□□□□ 0.54
VARS-216ENST00000428445 ORC3Q9UBD5 711 aaPredicted RBP18.43■□□□□ 0.54
VARS-216ENST00000428445 CARNS1A5YM72 827 aa18.42■□□□□ 0.54
VARS-216ENST00000428445 INPPL1O15357 1258 aa18.42■□□□□ 0.54
VARS-216ENST00000428445 EFEMP2O95967 443 aa18.42■□□□□ 0.54
VARS-216ENST00000428445 ARF4P18085 180 aaPredicted RBP18.42■□□□□ 0.54
VARS-216ENST00000428445 RPL17P18621 184 aaKnown RBP18.42■□□□□ 0.54
VARS-216ENST00000428445 MBTD1Q05BQ5 628 aa18.42■□□□□ 0.54
VARS-216ENST00000428445 DSC1Q08554 894 aa18.42■□□□□ 0.54
VARS-216ENST00000428445 CAPSQ13938 189 aa18.42■□□□□ 0.54
VARS-216ENST00000428445 AMHR2Q16671 573 aa18.42■□□□□ 0.54
VARS-216ENST00000428445 MAEAQ7L5Y9 396 aa18.42■□□□□ 0.54
VARS-216ENST00000428445 FRMD5Q7Z6J6 570 aa18.42■□□□□ 0.54
VARS-216ENST00000428445 EXOC8Q8IYI6 725 aa18.42■□□□□ 0.54
VARS-216ENST00000428445 PIGOQ8TEQ8 1089 aa18.42■□□□□ 0.54
VARS-216ENST00000428445 TNFRSF25Q93038 417 aa18.42■□□□□ 0.54
VARS-216ENST00000428445 GPR62Q9BZJ7 368 aa18.42■□□□□ 0.54
VARS-216ENST00000428445 CSRNP2Q9H175 543 aa18.42■□□□□ 0.54
VARS-216ENST00000428445 IRF2BPLQ9H1B7 796 aa18.42■□□□□ 0.54
VARS-216ENST00000428445 CDKL5O76039 1030 aa18.41■□□□□ 0.54
VARS-216ENST00000428445 BAG4O95429 457 aaKnown RBP18.41■□□□□ 0.54
VARS-216ENST00000428445 LARGE1O95461 756 aa18.41■□□□□ 0.54
VARS-216ENST00000428445 CFHP08603 1231 aa18.41■□□□□ 0.54
VARS-216ENST00000428445 GLRA2P23416 452 aa18.41■□□□□ 0.54
VARS-216ENST00000428445 GBP2P32456 591 aaPredicted RBP18.41■□□□□ 0.54
VARS-216ENST00000428445 ARL2P36404 184 aa18.41■□□□□ 0.54
VARS-216ENST00000428445 GLUD2P49448 558 aa18.41■□□□□ 0.54
VARS-216ENST00000428445 CLCN5P51795 746 aa18.41■□□□□ 0.54
VARS-216ENST00000428445 NOTUMQ6P988 496 aa18.41■□□□□ 0.54
VARS-216ENST00000428445 RNF168Q8IYW5 571 aaPredicted RBP18.41■□□□□ 0.54
VARS-216ENST00000428445 SIX5Q8N196 739 aa18.41■□□□□ 0.54
VARS-216ENST00000428445 GSTCDQ8NEC7 633 aa18.41■□□□□ 0.54
VARS-216ENST00000428445 MYADMQ96S97 322 aa18.41■□□□□ 0.54
VARS-216ENST00000428445 HSD17B14Q9BPX1 270 aa18.41■□□□□ 0.54
VARS-216ENST00000428445 FBXL21Q9UKT6 434 aa18.41■□□□□ 0.54
VARS-216ENST00000428445 PPME1Q9Y570 386 aa18.41■□□□□ 0.54
VARS-216ENST00000428445 STK36Q9NRP7 1315 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms