RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 TRIP13Q15645 432 aaPredicted RBP11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 AP1ARQ63HQ0 302 aa11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 RINT1Q6NUQ1 792 aa11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 MAEAQ7L5Y9 396 aa11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 DCAF4Q8WV16 495 aa11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 LRRC37BQ96QE4 947 aa11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 CPSF2Q9P2I0 782 aaKnown RBP11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 ASTN1O14525 1302 aa11.53□□□□□ -0.56
ATP2C1-204ENST00000428331 KIF3CO14782 793 aa11.52□□□□□ -0.56
ATP2C1-204ENST00000428331 RIMBP2O15034 1052 aa11.52□□□□□ -0.56
ATP2C1-204ENST00000428331 DCTN3O75935 186 aa11.52□□□□□ -0.56
ATP2C1-204ENST00000428331 MAPK4P31152 587 aa11.52□□□□□ -0.56
ATP2C1-204ENST00000428331 MXI1P50539 228 aa11.52□□□□□ -0.56
ATP2C1-204ENST00000428331 POU5F1Q01860 360 aaKnown RBP11.52□□□□□ -0.56
ATP2C1-204ENST00000428331 ZBTB16Q05516 673 aa11.52□□□□□ -0.56
ATP2C1-204ENST00000428331 KYNUQ16719 465 aa11.52□□□□□ -0.56
ATP2C1-204ENST00000428331 EXOC3L1Q86VI1 746 aa11.52□□□□□ -0.56
ATP2C1-204ENST00000428331 MARCH10Q8NA82 808 aaPredicted RBP11.52□□□□□ -0.56
ATP2C1-204ENST00000428331 KCNV2Q8TDN2 545 aa11.52□□□□□ -0.56
ATP2C1-204ENST00000428331 C1orf54Q8WWF1 131 aa11.52□□□□□ -0.56
ATP2C1-204ENST00000428331 FAM167BQ9BTA0 163 aa11.52□□□□□ -0.56
ATP2C1-204ENST00000428331 SIX2Q9NPC8 291 aa11.52□□□□□ -0.56
ATP2C1-204ENST00000428331 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.52□□□□□ -0.566e-6■■■■■ 93.2
ATP2C1-204ENST00000428331 RGL2O15211 777 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 CFBP00751 764 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 KRT5P13647 590 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 TMED2Q15363 201 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 MFSD5Q6N075 450 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 SYDE1Q6ZW31 735 aaPredicted RBP11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 MIGA2Q7L4E1 593 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 CCDC89Q8N998 374 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 LINC00116Q8NCU8 138 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 KRT35Q92764 455 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 PCIF1Q9H4Z3 704 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 TMEM206Q9H813 350 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 WHRNQ9P202 907 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 ANKRD36CQ5JPF3 1778 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 KCNQ2O43526 872 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 VCAM1P19320 739 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 PSEN1P49768 467 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 CERKLQ49MI3 558 aaPredicted RBP11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 TRAPPC3LQ5T215 181 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 CYP4F22Q6NT55 531 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 AGGF1Q8N302 714 aaeCLIP11.52□□□□□ -0.572e-9■□□□□ 10.7
ATP2C1-204ENST00000428331 MAB21L3Q8N8X9 362 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 PPFIBP2Q8ND30 876 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 ANKRD27Q96NW4 1050 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 EBF2Q9HAK2 575 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 DAGLAQ9Y4D2 1042 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 EMSYQ7Z589 1322 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 CYP3A7-CYP3A51PA0A087WV96 503 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 SNHG28P0DPA3 235 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 DLATP10515 647 aaKnown RBP11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 CYP3A7P24462 503 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 GJC1P36383 396 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 GCLMP48507 274 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 CLK2P49760 499 aaKnown RBP11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 MXRA7P84157 204 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 KCNA1Q09470 495 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 NR1H3Q13133 447 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 SPARCL1Q14515 664 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 STAT4Q14765 748 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 RBBP5Q15291 538 aaKnown RBP11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 MUM1Q2TAK8 710 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 ZDHHC24Q6UX98 284 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 FAM163AQ96GL9 167 aaPredicted RBP11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 TUFT1Q9NNX1 390 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 AGPAT3Q9NRZ7 376 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 UVRAGQ9P2Y5 699 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 MYH7BA7E2Y1 1941 aa11.52□□□□□ -0.57
ATP2C1-204ENST00000428331 VAMP7P51809 220 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 AADACL2Q6P093 401 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 SMIM5Q71RC9 77 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 SLC30A5Q8TAD4 765 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 CFAP57Q96MR6 1250 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 SMC6Q96SB8 1091 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 TAS2R14Q9NYV8 317 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 UBE4BO95155 1302 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 CLDN3O15551 220 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 SKAP2O75563 359 aaPredicted RBP11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 TROVE2P10155 538 aaKnown RBP eCLIP11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 ICA1Q05084 483 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 NSMFQ6X4W1 530 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 FBXO41Q8TF61 875 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 CKAP2Q8WWK9 683 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 DYDC2Q96IM9 177 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 IWS1Q96ST2 819 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 TRAIPQ9BWF2 469 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 WDR11Q9BZH6 1224 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 YIPF3Q9GZM5 350 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 EXOC1LA0A1B0GW35 172 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 TTC4O95801 387 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 PYGMP11217 842 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 MAGEB18Q96M61 343 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 GRHL1Q9NZI5 618 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 CCNL1Q9UK58 526 aaPredicted RBP11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 USH1CQ9Y6N9 552 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 RPTORQ8N122 1335 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 GZMAP12544 262 aa11.51□□□□□ -0.57
ATP2C1-204ENST00000428331 HOXA13P31271 388 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms