RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 NCANO14594 1321 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 CEP104O60308 925 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 ZBED4O75132 1171 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 SLC5A1P13866 664 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 INHBCP55103 352 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 SLC35G1Q2M3R5 365 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 LRRC23Q53EV4 343 aaPredicted RBP5.52□□□□□ -1.53
RIF1-203ENST00000428287 PLEKHG4Q58EX7 1191 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 SH2D4BQ5SQS7 431 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 RBM46Q8TBY0 533 aaKnown RBP5.52□□□□□ -1.53
RIF1-203ENST00000428287 ZNF384Q8TF68 577 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 SCOCQ9UIL1 159 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 ITGB1BP2Q9UKP3 347 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 UNC13CQ8NB66 2214 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 MROH5Q6ZUA9 1318 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 LCTP09848 1927 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 OR52Z1P0C646 297 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 MCM7P33993 719 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 RAP1GDS1P52306 607 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 PMS2P54278 862 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 KCNH2Q12809 1159 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 ITGA9Q13797 1035 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 SNX30Q5VWJ9 437 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 C11orf63Q6NUN7 778 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 SUPT20HQ8NEM7 779 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 PREBQ9HCU5 417 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 FRMPD4Q14CM0 1322 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 CASP8AP2Q9UKL3 1982 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 PP2D1A8MPX8 630 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 A8MUI8 341 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 IRS4O14654 1257 aaPredicted RBP5.52□□□□□ -1.53
RIF1-203ENST00000428287 TMCC1O94876 653 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 ZWINTO95229 277 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 ARHGAP4P98171 946 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 SIX1Q15475 284 aaPredicted RBP5.52□□□□□ -1.53
RIF1-203ENST00000428287 CCDC178Q5BJE1 867 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 METTL24Q5JXM2 366 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 FRMD5Q7Z6J6 570 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 JAMLQ86YT9 394 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 MAGEB18Q96M61 343 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 PRMT1Q99873 361 aaKnown RBP5.52□□□□□ -1.53
RIF1-203ENST00000428287 KIAA1683Q9H0B3 1180 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 ERVK-5Q9HDB9 667 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 TICRRQ7Z2Z1 1910 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 PRPF4O43172 522 aaKnown RBP eCLIP5.52□□□□□ -1.532e-8■■■□□ 15.8
RIF1-203ENST00000428287 DCTN3O75935 186 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 CHRNB2P17787 502 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 HOXD13P35453 343 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 THEMISQ8N1K5 641 aaPredicted RBP5.52□□□□□ -1.53
RIF1-203ENST00000428287 FBXO41Q8TF61 875 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 ECT2Q9H8V3 914 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 METTL14Q9HCE5 456 aaKnown RBP5.52□□□□□ -1.53
RIF1-203ENST00000428287 LARSQ9P2J5 1176 aaKnown RBP5.52□□□□□ -1.53
RIF1-203ENST00000428287 SMAPO00193 183 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 ENTPD5O75356 428 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 TTLL1O95922 423 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 RPL13P26373 211 aaKnown RBP5.52□□□□□ -1.53
RIF1-203ENST00000428287 TMED1Q13445 227 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 TDRD12Q587J7 1177 aaKnown RBP5.52□□□□□ -1.53
RIF1-203ENST00000428287 ARHGEF18Q6ZSZ5 1173 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 CYFIP1Q7L576 1253 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 KLHL7Q8IXQ5 586 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 KIF2BQ8N4N8 673 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 PCDHA4Q9UN74 947 aa5.52□□□□□ -1.53
RIF1-203ENST00000428287 SHANK1Q9Y566 2161 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 NVLO15381 856 aaKnown RBP5.51□□□□□ -1.53
RIF1-203ENST00000428287 CPA3P15088 417 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 GSTT1P30711 240 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 EMP3P54852 163 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 RNF220Q5VTB9 566 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 BORAQ6PGQ7 559 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 LRRC74BQ6ZQY2 392 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 TAF4BQ92750 862 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 FAM89AQ96GI7 184 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 GOLPH3Q9H4A6 298 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 RALGAPA2Q2PPJ7 1873 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 MAPK13O15264 365 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 EDF1O60869 148 aaKnown RBP5.51□□□□□ -1.53
RIF1-203ENST00000428287 FGGP02679 453 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 MARK3P27448 753 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 PCK1P35558 622 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 RFC5P40937 340 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 RAD23BP54727 409 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 NR1H3Q13133 447 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 KLC3Q6P597 504 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 PPP1R21Q6ZMI0 780 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 DDX12PQ92771 950 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.51□□□□□ -1.53
RIF1-203ENST00000428287 NEU2Q9Y3R4 380 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 PLXNA1Q9UIW2 1896 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 PCDH11YQ9BZA8 1340 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 ANKRD62A6NC57 917 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 GSC2O15499 205 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 IL1BP01584 269 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 CRABP2P29373 138 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 IFNAR2P48551 515 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 GALCP54803 685 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 CTSWP56202 376 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 MXRA7P84157 204 aa5.51□□□□□ -1.53
RIF1-203ENST00000428287 KRT72Q14CN4 511 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms