RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 PLXNA3P51805 1871 aa20.39■□□□□ 0.85
PSPC1-202ENST00000427943 TRIP11Q15643 1979 aa20.38■□□□□ 0.85
PSPC1-202ENST00000427943 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.38■□□□□ 0.85
PSPC1-202ENST00000427943 PP2D1A8MPX8 630 aa20.38■□□□□ 0.85
PSPC1-202ENST00000427943 NPTXRO95502 500 aa20.38■□□□□ 0.85
PSPC1-202ENST00000427943 CXCL14O95715 111 aa20.38■□□□□ 0.85
PSPC1-202ENST00000427943 CDCA2Q69YH5 1023 aaPredicted RBP20.38■□□□□ 0.85
PSPC1-202ENST00000427943 ANKRD54Q6NXT1 300 aa20.38■□□□□ 0.85
PSPC1-202ENST00000427943 ZBTB8OSQ8IWT0 167 aa20.38■□□□□ 0.85
PSPC1-202ENST00000427943 ZFP42Q96MM3 310 aa20.38■□□□□ 0.85
PSPC1-202ENST00000427943 GAD1Q99259 594 aa20.38■□□□□ 0.85
PSPC1-202ENST00000427943 LRFN3Q9BTN0 628 aa20.38■□□□□ 0.85
PSPC1-202ENST00000427943 VN1R3Q9BXE9 311 aa20.38■□□□□ 0.85
PSPC1-202ENST00000427943 POLD4Q9HCU8 107 aa20.38■□□□□ 0.85
PSPC1-202ENST00000427943 DDX19AQ9NUU7 478 aaKnown RBP20.38■□□□□ 0.85
PSPC1-202ENST00000427943 KIAA1024Q9UPX6 916 aa20.38■□□□□ 0.85
PSPC1-202ENST00000427943 HCFC2Q9Y5Z7 792 aa20.38■□□□□ 0.85
PSPC1-202ENST00000427943 CARNS1A5YM72 827 aa20.37■□□□□ 0.85
PSPC1-202ENST00000427943 ARL5CA6NH57 179 aa20.37■□□□□ 0.85
PSPC1-202ENST00000427943 CLASP2O75122 1294 aaKnown RBP20.37■□□□□ 0.85
PSPC1-202ENST00000427943 CYP11B2P19099 503 aa20.37■□□□□ 0.85
PSPC1-202ENST00000427943 MUTP22033 750 aa20.37■□□□□ 0.85
PSPC1-202ENST00000427943 SCNN1GP51170 649 aa20.37■□□□□ 0.85
PSPC1-202ENST00000427943 TMEM31Q5JXX7 168 aa20.37■□□□□ 0.85
PSPC1-202ENST00000427943 DDX53Q86TM3 631 aaKnown RBP20.37■□□□□ 0.85
PSPC1-202ENST00000427943 IGSF22Q8N9C0 903 aa20.37■□□□□ 0.85
PSPC1-202ENST00000427943 BHMT2Q9H2M3 363 aa20.37■□□□□ 0.85
PSPC1-202ENST00000427943 UBN1Q9NPG3 1134 aa20.37■□□□□ 0.85
PSPC1-202ENST00000427943 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.37■□□□□ 0.85
PSPC1-202ENST00000427943 KANSL3Q9P2N6 904 aa20.37■□□□□ 0.85
PSPC1-202ENST00000427943 NRP1O14786 923 aa20.36■□□□□ 0.85
PSPC1-202ENST00000427943 SSBP05455 408 aaKnown RBP eCLIP20.36■□□□□ 0.85
PSPC1-202ENST00000427943 CTSAP10619 480 aa20.36■□□□□ 0.85
PSPC1-202ENST00000427943 LIG1P18858 919 aa20.36■□□□□ 0.85
PSPC1-202ENST00000427943 AKAP5P24588 427 aa20.36■□□□□ 0.85
PSPC1-202ENST00000427943 BMS1Q14692 1282 aaKnown RBP20.36■□□□□ 0.85
PSPC1-202ENST00000427943 IL17AQ16552 155 aa20.36■□□□□ 0.85
PSPC1-202ENST00000427943 SLC27A1Q6PCB7 646 aa20.36■□□□□ 0.85
PSPC1-202ENST00000427943 SYCE2Q6PIF2 218 aa20.36■□□□□ 0.85
PSPC1-202ENST00000427943 TMEM184AQ6ZMB5 413 aa20.36■□□□□ 0.85
PSPC1-202ENST00000427943 PPP4R3CPQ6ZMV5 832 aa20.36■□□□□ 0.85
PSPC1-202ENST00000427943 TMEM175Q9BSA9 504 aa20.36■□□□□ 0.85
PSPC1-202ENST00000427943 RAB34Q9BZG1 259 aa20.36■□□□□ 0.85
PSPC1-202ENST00000427943 PRMT7Q9NVM4 692 aaPredicted RBP20.36■□□□□ 0.85
PSPC1-202ENST00000427943 MIOSQ9NXC5 875 aa20.36■□□□□ 0.85
PSPC1-202ENST00000427943 FAN1Q9Y2M0 1017 aa20.36■□□□□ 0.85
PSPC1-202ENST00000427943 PRG3Q9Y2Y8 225 aaPredicted RBP20.36■□□□□ 0.85
PSPC1-202ENST00000427943 C2orf16Q68DN1 1984 aa20.35■□□□□ 0.85
PSPC1-202ENST00000427943 TTLL13PA6NNM8 815 aa20.35■□□□□ 0.85
PSPC1-202ENST00000427943 H3BQV1 296 aa20.35■□□□□ 0.85
PSPC1-202ENST00000427943 DCXO43602 365 aa20.35■□□□□ 0.85
PSPC1-202ENST00000427943 CDC25AP30304 524 aa20.35■□□□□ 0.85
PSPC1-202ENST00000427943 NAMPTP43490 491 aa20.35■□□□□ 0.85
PSPC1-202ENST00000427943 OR1G1P47890 313 aa20.35■□□□□ 0.85
PSPC1-202ENST00000427943 PDIA5Q14554 519 aa20.35■□□□□ 0.85
PSPC1-202ENST00000427943 TMEM132AQ24JP5 1023 aa20.35■□□□□ 0.85
PSPC1-202ENST00000427943 COLGALT2Q8IYK4 626 aa20.35■□□□□ 0.85
PSPC1-202ENST00000427943 HACE1Q8IYU2 909 aa20.35■□□□□ 0.85
PSPC1-202ENST00000427943 DEPTORQ8TB45 409 aa20.35■□□□□ 0.85
PSPC1-202ENST00000427943 CASP10Q92851 521 aa20.35■□□□□ 0.85
PSPC1-202ENST00000427943 KIFC3Q9BVG8 833 aa20.35■□□□□ 0.85
PSPC1-202ENST00000427943 S1PR5Q9H228 398 aa20.35■□□□□ 0.85
PSPC1-202ENST00000427943 CDH22Q9UJ99 828 aa20.35■□□□□ 0.85
PSPC1-202ENST00000427943 SMC3Q9UQE7 1217 aa20.35■□□□□ 0.85
PSPC1-202ENST00000427943 USP20Q9Y2K6 914 aa20.35■□□□□ 0.85
PSPC1-202ENST00000427943 DENND4AQ7Z401 1863 aa20.35■□□□□ 0.85
PSPC1-202ENST00000427943 A0A1B0GUA9 196 aa20.34■□□□□ 0.85
PSPC1-202ENST00000427943 E9PMD0 336 aa20.34■□□□□ 0.85
PSPC1-202ENST00000427943 LAD1O00515 517 aa20.34■□□□□ 0.85
PSPC1-202ENST00000427943 INPPL1O15357 1258 aa20.34■□□□□ 0.85
PSPC1-202ENST00000427943 ALDH2P05091 517 aa20.34■□□□□ 0.85
PSPC1-202ENST00000427943 EDN1P05305 212 aa20.34■□□□□ 0.85
PSPC1-202ENST00000427943 PRKCBP05771 671 aa20.34■□□□□ 0.85
PSPC1-202ENST00000427943 ALADP13716 330 aa20.34■□□□□ 0.85
PSPC1-202ENST00000427943 PRPHP41219 470 aa20.34■□□□□ 0.85
PSPC1-202ENST00000427943 MCM2P49736 904 aa20.34■□□□□ 0.85
PSPC1-202ENST00000427943 RILPL1Q5EBL4 403 aa20.34■□□□□ 0.85
PSPC1-202ENST00000427943 DTHD1Q6ZMT9 781 aa20.34■□□□□ 0.85
PSPC1-202ENST00000427943 RNF135Q8IUD6 432 aa20.34■□□□□ 0.85
PSPC1-202ENST00000427943 TMEM87AQ8NBN3 555 aa20.34■□□□□ 0.85
PSPC1-202ENST00000427943 SUSD6Q92537 303 aa20.34■□□□□ 0.85
PSPC1-202ENST00000427943 PRIMPOLQ96LW4 560 aa20.34■□□□□ 0.85
PSPC1-202ENST00000427943 C2orf40Q9H1Z8 148 aa20.34■□□□□ 0.85
PSPC1-202ENST00000427943 FZD8Q9H461 694 aa20.34■□□□□ 0.85
PSPC1-202ENST00000427943 PDZD7Q9H5P4 517 aa20.34■□□□□ 0.85
PSPC1-202ENST00000427943 MARCH5Q9NX47 278 aa20.34■□□□□ 0.85
PSPC1-202ENST00000427943 KLK14Q9P0G3 267 aa20.34■□□□□ 0.85
PSPC1-202ENST00000427943 PARP2Q9UGN5 583 aa20.34■□□□□ 0.85
PSPC1-202ENST00000427943 MUTYHQ9UIF7 546 aa20.34■□□□□ 0.85
PSPC1-202ENST00000427943 GIT1Q9Y2X7 761 aa20.34■□□□□ 0.85
PSPC1-202ENST00000427943 F8W810 466 aa20.33■□□□□ 0.85
PSPC1-202ENST00000427943 GPR37L1O60883 481 aa20.33■□□□□ 0.85
PSPC1-202ENST00000427943 EPCAMP16422 314 aa20.33■□□□□ 0.85
PSPC1-202ENST00000427943 DSC1Q08554 894 aa20.33■□□□□ 0.85
PSPC1-202ENST00000427943 PRPF4BQ13523 1007 aaKnown RBP20.33■□□□□ 0.85
PSPC1-202ENST00000427943 CBX2Q14781 532 aaPredicted RBP20.33■□□□□ 0.85
PSPC1-202ENST00000427943 PPP2R5AQ15172 486 aa20.33■□□□□ 0.85
PSPC1-202ENST00000427943 PTPN14Q15678 1187 aa20.33■□□□□ 0.85
PSPC1-202ENST00000427943 MAPK6Q16659 721 aa20.33■□□□□ 0.85
PSPC1-202ENST00000427943 FAM187BQ17R55 369 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms