RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 RIT2Q99578 217 aa15.42■□□□□ 0.06
LIG1-202ENST00000427526 EHMT1Q9H9B1 1298 aa15.42■□□□□ 0.06
LIG1-202ENST00000427526 MYH11P35749 1972 aa15.42■□□□□ 0.06
LIG1-202ENST00000427526 ARHGEF35A5YM69 484 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 BCRP11274 1271 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 ALAS1P13196 640 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 COPB2P35606 906 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 FNTAP49354 379 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 PPP2R2AP63151 447 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 ZNF211Q13398 564 aaPredicted RBP15.41■□□□□ 0.06
LIG1-202ENST00000427526 PRPF4BQ13523 1007 aaKnown RBP15.41■□□□□ 0.06
LIG1-202ENST00000427526 C6orf89Q6UWU4 347 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 MICALCLQ6ZW33 695 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 HOMEZQ8IX15 550 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 TRPM4Q8TD43 1214 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 CLEC4DQ8WXI8 215 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 LPAR1Q92633 364 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 FMO2Q99518 471 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 GMNCA6NCL1 334 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 DCDC2CA8MYV0 355 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 PAEPP09466 180 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 DRG2P55039 364 aaKnown RBP15.41■□□□□ 0.06
LIG1-202ENST00000427526 PPP3CAQ08209 521 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 CLUL1Q15846 466 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 C1orf220Q5T0J3 134 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 C11orf63Q6NUN7 778 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 PADI6Q6TGC4 694 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 INTS8Q75QN2 995 aaKnown RBP15.41■□□□□ 0.06
LIG1-202ENST00000427526 ARHGEF19Q8IW93 802 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 OTUD6BQ8N6M0 293 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 C3orf20Q8ND61 904 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 GLG1Q92896 1179 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 MXRA8Q9BRK3 442 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 EPB41L4BQ9H329 900 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 UBE2TQ9NPD8 197 aaPredicted RBP15.41■□□□□ 0.06
LIG1-202ENST00000427526 PPANQ9NQ55 473 aaKnown RBP15.41■□□□□ 0.06
LIG1-202ENST00000427526 NOVA2Q9UNW9 492 aaKnown RBP15.41■□□□□ 0.06
LIG1-202ENST00000427526 EMSYQ7Z589 1322 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 FAM187AA6NFU0 413 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 FSBPO95073 299 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 FTLP02792 175 aaPredicted RBP15.41■□□□□ 0.06
LIG1-202ENST00000427526 ITGB5P18084 799 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 TMOD1P28289 359 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 EPC2Q52LR7 807 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 ADAT2Q7Z6V5 191 aaKnown RBP15.41■□□□□ 0.06
LIG1-202ENST00000427526 C12orf56Q8IXR9 622 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 TRIM31Q9BZY9 425 aa15.41■□□□□ 0.06
LIG1-202ENST00000427526 SEPT11Q9NVA2 429 aaKnown RBP15.41■□□□□ 0.06
LIG1-202ENST00000427526 LOXHD1Q8IVV2 1947 aa15.4■□□□□ 0.06
LIG1-202ENST00000427526 GOLGA6L10A0A0M3HER8 536 aa15.4■□□□□ 0.06
LIG1-202ENST00000427526 FAM170AA1A519 330 aa15.4■□□□□ 0.06
LIG1-202ENST00000427526 TISP43B9A030 160 aa15.4■□□□□ 0.06
LIG1-202ENST00000427526 P4HA2O15460 535 aa15.4■□□□□ 0.06
LIG1-202ENST00000427526 MAPTP10636 758 aaKnown RBP15.4■□□□□ 0.06
LIG1-202ENST00000427526 HSD17B4P51659 736 aa15.4■□□□□ 0.06
LIG1-202ENST00000427526 VAMP7P51809 220 aa15.4■□□□□ 0.06
LIG1-202ENST00000427526 DHX34Q14147 1143 aaKnown RBP15.4■□□□□ 0.06
LIG1-202ENST00000427526 IL31RAQ8NI17 732 aa15.4■□□□□ 0.06
LIG1-202ENST00000427526 NEK9Q8TD19 979 aa15.4■□□□□ 0.06
LIG1-202ENST00000427526 VTI1AQ96AJ9 217 aa15.4■□□□□ 0.06
LIG1-202ENST00000427526 CYFIP2Q96F07 1278 aa15.4■□□□□ 0.06
LIG1-202ENST00000427526 MYCBPQ99417 103 aaPredicted RBP15.4■□□□□ 0.06
LIG1-202ENST00000427526 RPAP3Q9H6T3 665 aaPredicted RBP15.4■□□□□ 0.06
LIG1-202ENST00000427526 TMOD4Q9NZQ9 345 aa15.4■□□□□ 0.06
LIG1-202ENST00000427526 PKD2L1Q9P0L9 805 aa15.4■□□□□ 0.06
LIG1-202ENST00000427526 ATP8A1Q9Y2Q0 1164 aa15.4■□□□□ 0.06
LIG1-202ENST00000427526 K7ENM7 598 aa15.4■□□□□ 0.06
LIG1-202ENST00000427526 KIAA0754O94854 1291 aa15.4■□□□□ 0.06
LIG1-202ENST00000427526 KRT13P13646 458 aa15.4■□□□□ 0.06
LIG1-202ENST00000427526 EIF3BP55884 814 aaKnown RBP15.4■□□□□ 0.06
LIG1-202ENST00000427526 MAGOHP61326 146 aaKnown RBP15.4■□□□□ 0.06
LIG1-202ENST00000427526 MAGOHBQ96A72 148 aaKnown RBP15.4■□□□□ 0.06
LIG1-202ENST00000427526 TLCD1Q96CP7 247 aa15.4■□□□□ 0.06
LIG1-202ENST00000427526 WNK4Q96J92 1243 aa15.4■□□□□ 0.06
LIG1-202ENST00000427526 PCIF1Q9H4Z3 704 aa15.4■□□□□ 0.06
LIG1-202ENST00000427526 TMEM206Q9H813 350 aa15.4■□□□□ 0.06
LIG1-202ENST00000427526 SLC38A10Q9HBR0 1119 aa15.4■□□□□ 0.06
LIG1-202ENST00000427526 MIF4GDA9UHW6 222 aaKnown RBP15.39■□□□□ 0.05
LIG1-202ENST00000427526 KIAA0391O15091 583 aaKnown RBP15.39■□□□□ 0.05
LIG1-202ENST00000427526 PTGIRP43119 386 aa15.39■□□□□ 0.05
LIG1-202ENST00000427526 AADACL2Q6P093 401 aa15.39■□□□□ 0.05
LIG1-202ENST00000427526 SUGP1Q8IWZ8 645 aaKnown RBP15.39■□□□□ 0.05
LIG1-202ENST00000427526 WRNIP1Q96S55 665 aa15.39■□□□□ 0.05
LIG1-202ENST00000427526 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.39■□□□□ 0.05
LIG1-202ENST00000427526 LARSQ9P2J5 1176 aaKnown RBP15.39■□□□□ 0.05
LIG1-202ENST00000427526 USP20Q9Y2K6 914 aa15.39■□□□□ 0.05
LIG1-202ENST00000427526 PFASO15067 1338 aa15.39■□□□□ 0.05
LIG1-202ENST00000427526 DHX15O43143 795 aaKnown RBP15.39■□□□□ 0.05
LIG1-202ENST00000427526 MCCD1P59942 119 aaPredicted RBP15.39■□□□□ 0.05
LIG1-202ENST00000427526 GPC5P78333 572 aa15.39■□□□□ 0.05
LIG1-202ENST00000427526 KRT71Q3SY84 523 aa15.39■□□□□ 0.05
LIG1-202ENST00000427526 ODF2Q5BJF6 829 aa15.39■□□□□ 0.05
LIG1-202ENST00000427526 ICE2Q659A1 982 aa15.39■□□□□ 0.05
LIG1-202ENST00000427526 ZDHHC24Q6UX98 284 aa15.39■□□□□ 0.05
LIG1-202ENST00000427526 MMS22LQ6ZRQ5 1243 aa15.39■□□□□ 0.05
LIG1-202ENST00000427526 JAMLQ86YT9 394 aa15.39■□□□□ 0.05
LIG1-202ENST00000427526 ZDHHC14Q8IZN3 488 aa15.39■□□□□ 0.05
LIG1-202ENST00000427526 KRT35Q92764 455 aa15.39■□□□□ 0.05
LIG1-202ENST00000427526 CBWD1Q9BRT8 395 aa15.39■□□□□ 0.05
LIG1-202ENST00000427526 NUDT17P0C025 328 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms