RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 DSEQ9UL01 958 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 PNMA2Q9UL42 364 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 PADI4Q9UM07 663 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 AGAP1Q9UPQ3 857 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 SMG5Q9UPR3 1016 aaKnown RBP6□□□□□ -1.45
VTI1BP4-201ENST00000427516 CD2APQ9Y5K6 639 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 GPC6Q9Y625 555 aaPredicted RBP6□□□□□ -1.45
VTI1BP4-201ENST00000427516 SQORQ9Y6N5 450 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 RTL9Q8NET4 1388 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 FRMPD4Q14CM0 1322 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 ADGRA3Q8IWK6 1321 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 SYNGAP1Q96PV0 1343 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 C4AP0C0L4 1744 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 C4BP0C0L5 1744 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 SH3PXD2BA1X283 911 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 TCP11X1B4DZS4 312 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 LAD1O00515 517 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 KCNK3O14649 394 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 CAPN9O14815 690 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 MAGEB2O15479 319 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 ADCY3O60266 1144 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 SPAG7O75391 227 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 TCEA3O75764 348 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 DXOO77932 396 aaKnown RBP5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 TNFAIP8O95379 198 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 PSMG1O95456 288 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 TTLL1O95922 423 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 TFRCP02786 760 aaKnown RBP5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 CCDC159P0C7I6 412 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 RARGP13631 454 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 CCNE1P24864 410 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 CRABP2P29373 138 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 CDC25CP30307 473 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 CHRNA3P32297 505 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 KRT6CP48668 564 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 NT5C2P49902 561 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 NOP14P78316 857 aaKnown RBP5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 COG7P83436 770 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 DR1Q01658 176 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 LRRC63Q05C16 580 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 FAM69CQ0P6D2 419 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 TUBA3CQ13748 450 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 GRM2Q14416 872 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 KIF22Q14807 665 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 SUZ12Q15022 739 aaKnown RBP5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 UAP1Q16222 522 aaPredicted RBP5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 PKN1Q16512 942 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 BCL2A1Q16548 175 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 MAN2A1Q16706 1144 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 ZNF827Q17R98 1081 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 CCDC14Q49A88 953 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 TNNI3KQ59H18 835 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 TCERG1LQ5VWI1 586 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 OLFML2BQ68BL8 750 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 ZNF787Q6DD87 383 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 KSR2Q6VAB6 950 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 SYDE1Q6ZW31 735 aaPredicted RBP5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 CYFIP1Q7L576 1253 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 NET1Q7Z628 596 aaPredicted RBP5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 EXOC3L1Q86VI1 746 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 CCDC125Q86Z20 511 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 TMEM126BQ8IUX1 230 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 KLHL7Q8IXQ5 586 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 MB21D2Q8IYB1 491 aaPredicted RBP5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 EME1Q96AY2 570 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 EAF2Q96CJ1 260 aaPredicted RBP5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 CFAP57Q96MR6 1250 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 TTC25Q96NG3 672 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 BTBD10Q9BSF8 475 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 TBC1D10AQ9BXI6 508 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 FOXP3Q9BZS1 431 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 IMPG2Q9BZV3 1241 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 CCDC113Q9H0I3 377 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 DHX36Q9H2U1 1008 aaKnown RBP5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 PIDD1Q9HB75 910 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 PIH1D3Q9NQM4 214 aaKnown RBP5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 ATAD3AQ9NVI7 634 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 GID8Q9NWU2 228 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 GIN1Q9NXP7 522 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 TLR7Q9NYK1 1049 aaKnown RBP5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 ZFP69BQ9UJL9 534 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 MTUS1Q9ULD2 1270 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 TBC1D30Q9Y2I9 924 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 FAM32AQ9Y421 112 aaKnown RBP5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 SLC12A7Q9Y666 1083 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 SCINQ9Y6U3 715 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 FPGT-TNNI3KV9GXZ4 949 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 PCDH11XQ9BZA7 1347 aa5.99□□□□□ -1.45
VTI1BP4-201ENST00000427516 C1orf167Q5SNV9 1468 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 A0A0U1RQJ8 604 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 KANSL1LA0AUZ9 987 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 ESYT3A0FGR9 886 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 SIGLEC16A6NMB1 481 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 MIF4GDA9UHW6 222 aaKnown RBP5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 E9PBE3 544 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 ZNF701M0R085 212 aaPredicted RBP5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 GYG2O15488 501 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 ZNF862O60290 1169 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 MAGEC1O60732 1142 aa5.98□□□□□ -1.45
VTI1BP4-201ENST00000427516 CDH16O75309 829 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms