RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 RUSC1Q9BVN2 902 aa8.22□□□□□ -1.09
LINC01049-201ENST00000426840 AGO3Q9H9G7 860 aaKnown RBP8.22□□□□□ -1.09
LINC01049-201ENST00000426840 ATP6V0A4Q9HBG4 840 aa8.22□□□□□ -1.09
LINC01049-201ENST00000426840 GPRC5CQ9NQ84 441 aa8.22□□□□□ -1.09
LINC01049-201ENST00000426840 AKT3Q9Y243 479 aa8.22□□□□□ -1.09
LINC01049-201ENST00000426840 HPSEQ9Y251 543 aa8.22□□□□□ -1.09
LINC01049-201ENST00000426840 NOC2LQ9Y3T9 749 aaKnown RBP8.22□□□□□ -1.09
LINC01049-201ENST00000426840 SQORQ9Y6N5 450 aa8.22□□□□□ -1.09
LINC01049-201ENST00000426840 ARID2Q68CP9 1835 aa8.22□□□□□ -1.09
LINC01049-201ENST00000426840 LOXHD1Q8IVV2 1947 aa8.21□□□□□ -1.09
LINC01049-201ENST00000426840 NPHP3-ACAD11A0A0J9YXS1 232 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 A0A1B0GVL5 298 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 A0A1W2PQ27 194 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 A0A1W2PQ64 194 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 A0A1W2PQD8 194 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 FGBP02675 491 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 SSBP05455 408 aaKnown RBP eCLIP8.21□□□□□ -1.1
LINC01049-201ENST00000426840 PFKMP08237 780 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 GHRP10912 638 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 DARSP14868 501 aaKnown RBP8.21□□□□□ -1.1
LINC01049-201ENST00000426840 GUCY2CP25092 1073 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 TXLNAP40222 546 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 GIT2Q14161 759 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 DHX8Q14562 1220 aaKnown RBP8.21□□□□□ -1.1
LINC01049-201ENST00000426840 MXD4Q14582 209 aaPredicted RBP8.21□□□□□ -1.1
LINC01049-201ENST00000426840 SHHQ15465 462 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 C9orf50Q5SZB4 431 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 MRPL14Q6P1L8 145 aaKnown RBP8.21□□□□□ -1.1
LINC01049-201ENST00000426840 CCDC73Q6ZRK6 1079 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 CLEC17AQ6ZS10 378 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 RTN4RL1Q86UN2 441 aaPredicted RBP8.21□□□□□ -1.1
LINC01049-201ENST00000426840 ZNF410Q86VK4 478 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 RHPN2Q8IUC4 686 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 USP38Q8NB14 1042 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 MCPH1Q8NEM0 835 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 BSNDQ8WZ55 320 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 LARP4BQ92615 738 aaKnown RBP8.21□□□□□ -1.1
LINC01049-201ENST00000426840 CCDC43Q96MW1 224 aaKnown RBP8.21□□□□□ -1.1
LINC01049-201ENST00000426840 PPP1R16BQ96T49 567 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 OSMRQ99650 979 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 UBE2OQ9C0C9 1292 aaKnown RBP8.21□□□□□ -1.1
LINC01049-201ENST00000426840 POLR3FQ9H1D9 316 aaPredicted RBP8.21□□□□□ -1.1
LINC01049-201ENST00000426840 IFT122Q9HBG6 1241 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 ERVK-5Q9HDB9 667 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 PGPEP1Q9NXJ5 209 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 FAM13BQ9NYF5 915 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 STK17AQ9UEE5 414 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 KCNH3Q9ULD8 1083 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 COL4A3BPQ9Y5P4 624 aa8.21□□□□□ -1.1
LINC01049-201ENST00000426840 SIP14410 1827 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 MYMKA6NI61 221 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 SFI1A8K8P3 1242 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 M0QZ92 97 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 ERVH48-1M5A8F1 160 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 POLR2DO15514 142 aaKnown RBP8.2□□□□□ -1.1
LINC01049-201ENST00000426840 HIP1RO75146 1068 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 CSDE1O75534 798 aaKnown RBP8.2□□□□□ -1.1
LINC01049-201ENST00000426840 RPS6KA5O75582 802 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 SRGAP2CP0DJJ0 459 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 PFKFB1P16118 471 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 EIF4BP23588 611 aaKnown RBP8.2□□□□□ -1.1
LINC01049-201ENST00000426840 CD52P31358 61 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 STAT6P42226 847 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 NDUFA8P51970 172 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 PTENP60484 403 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 DHX9Q08211 1270 aaKnown RBP8.2□□□□□ -1.1
LINC01049-201ENST00000426840 CAPSQ13938 189 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 LONRF3Q496Y0 759 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 FAM102BQ5T8I3 360 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 RASIP1Q5U651 963 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 CNKSR3Q6P9H4 555 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 TSHZ1Q6ZSZ6 1077 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 SV2BQ7L1I2 683 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 SRGAP1Q7Z6B7 1085 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 FAM228AQ86W67 206 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 GPBP1Q86WP2 473 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 IQUBQ8NA54 791 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 RNF149Q8NC42 400 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 RASSF8Q8NHQ8 419 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 HERVK_113Q902F9 699 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 SEPT8Q92599 483 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 STAMQ92783 540 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 KIFAP3Q92845 792 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 DHX58Q96C10 678 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 DNAJC19Q96DA6 116 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 ZFP42Q96MM3 310 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 NTPCRQ9BSD7 190 aaKnown RBP8.2□□□□□ -1.1
LINC01049-201ENST00000426840 TIPINQ9BVW5 301 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 GCOM2Q9BZD3 368 aaPredicted RBP8.2□□□□□ -1.1
LINC01049-201ENST00000426840 GOLPH3LQ9H4A5 285 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 MINDY3Q9H8M7 445 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 KBTBD4Q9NVX7 518 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 KCND2Q9NZV8 630 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 SERTAD1Q9UHV2 236 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 PADI3Q9ULW8 664 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 ST3GAL5Q9UNP4 418 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 GINS2Q9Y248 185 aa8.2□□□□□ -1.1
LINC01049-201ENST00000426840 TNRC18O15417 2968 aaPredicted RBP8.2□□□□□ -1.1
LINC01049-201ENST00000426840 TANC1Q9C0D5 1861 aa8.19□□□□□ -1.1
LINC01049-201ENST00000426840 ENPP3O14638 875 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms