RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 ITPRIPL1Q6GPH6 555 aa19.05■□□□□ 0.64
ARHGEF28-203ENST00000426542 DDX47Q9H0S4 455 aaKnown RBP19.05■□□□□ 0.64
ARHGEF28-203ENST00000426542 ADA2Q9NZK5 511 aa19.05■□□□□ 0.64
ARHGEF28-203ENST00000426542 GRID2IPA4D2P6 1211 aa19.05■□□□□ 0.64
ARHGEF28-203ENST00000426542 ATP5HO75947 161 aa19.05■□□□□ 0.64
ARHGEF28-203ENST00000426542 SIK2Q9H0K1 926 aa19.05■□□□□ 0.64
ARHGEF28-203ENST00000426542 NDFIP2Q9NV92 336 aa19.05■□□□□ 0.64
ARHGEF28-203ENST00000426542 SEL1LQ9UBV2 794 aa19.05■□□□□ 0.64
ARHGEF28-203ENST00000426542 WARS2Q9UGM6 360 aaKnown RBP19.05■□□□□ 0.64
ARHGEF28-203ENST00000426542 CHRNA3P32297 505 aa19.05■□□□□ 0.64
ARHGEF28-203ENST00000426542 PRAMEP78395 509 aa19.05■□□□□ 0.64
ARHGEF28-203ENST00000426542 TGS1Q96RS0 853 aaKnown RBP19.05■□□□□ 0.64
ARHGEF28-203ENST00000426542 COG4Q9H9E3 785 aa19.05■□□□□ 0.64
ARHGEF28-203ENST00000426542 ESYT3A0FGR9 886 aa19.05■□□□□ 0.64
ARHGEF28-203ENST00000426542 F5H6K3 240 aa19.05■□□□□ 0.64
ARHGEF28-203ENST00000426542 BCAR1P56945 870 aa19.05■□□□□ 0.64
ARHGEF28-203ENST00000426542 KLRC3Q07444 240 aa19.05■□□□□ 0.64
ARHGEF28-203ENST00000426542 ORC2Q13416 577 aaPredicted RBP19.05■□□□□ 0.64
ARHGEF28-203ENST00000426542 PODNQ7Z5L7 613 aa19.05■□□□□ 0.64
ARHGEF28-203ENST00000426542 KIF12Q96FN5 646 aa19.05■□□□□ 0.64
ARHGEF28-203ENST00000426542 PRDM5Q9NQX1 630 aaPredicted RBP19.05■□□□□ 0.64
ARHGEF28-203ENST00000426542 HDAC6Q9UBN7 1215 aa19.05■□□□□ 0.64
ARHGEF28-203ENST00000426542 ZNF521Q96K83 1311 aa19.05■□□□□ 0.64
ARHGEF28-203ENST00000426542 PPP2R2AP63151 447 aa19.04■□□□□ 0.64
ARHGEF28-203ENST00000426542 APOBEC3FQ8IUX4 373 aaKnown RBP19.04■□□□□ 0.64
ARHGEF28-203ENST00000426542 OTUD5Q96G74 571 aa19.04■□□□□ 0.64
ARHGEF28-203ENST00000426542 TEX12Q9BXU0 123 aa19.04■□□□□ 0.64
ARHGEF28-203ENST00000426542 RHOT1Q8IXI2 618 aa19.04■□□□□ 0.64
ARHGEF28-203ENST00000426542 SPON2Q9BUD6 331 aa19.04■□□□□ 0.64
ARHGEF28-203ENST00000426542 MRPL40Q9NQ50 206 aaKnown RBP19.04■□□□□ 0.64
ARHGEF28-203ENST00000426542 EMSYQ7Z589 1322 aa19.04■□□□□ 0.64
ARHGEF28-203ENST00000426542 FCER1AP12319 257 aa19.04■□□□□ 0.64
ARHGEF28-203ENST00000426542 SLC26A7Q8TE54 656 aa19.04■□□□□ 0.64
ARHGEF28-203ENST00000426542 C1orf54Q8WWF1 131 aa19.04■□□□□ 0.64
ARHGEF28-203ENST00000426542 ACAD9Q9H845 621 aa19.04■□□□□ 0.64
ARHGEF28-203ENST00000426542 CYP27B1O15528 508 aa19.04■□□□□ 0.64
ARHGEF28-203ENST00000426542 PYGLP06737 847 aa19.04■□□□□ 0.64
ARHGEF28-203ENST00000426542 TRIM49P0CI25 452 aa19.04■□□□□ 0.64
ARHGEF28-203ENST00000426542 TRIM49CP0CI26 452 aa19.04■□□□□ 0.64
ARHGEF28-203ENST00000426542 NCAPD2Q15021 1401 aa19.04■□□□□ 0.64
ARHGEF28-203ENST00000426542 SLC4A7Q9Y6M7 1214 aa19.04■□□□□ 0.64
ARHGEF28-203ENST00000426542 CCDC137Q6PK04 289 aaKnown RBP19.04■□□□□ 0.64
ARHGEF28-203ENST00000426542 CPSF1Q10570 1443 aaKnown RBP19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 ASAP2O43150 1006 aa19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 SH3KBP1Q96B97 665 aa19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 NEUROG2Q9H2A3 272 aa19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 PIDD1Q9HB75 910 aa19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 AGO2Q9UKV8 859 aaKnown RBP19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 CPB1P15086 417 aa19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 AARSP49588 968 aaKnown RBP eCLIP19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 TMED8Q6PL24 325 aaPredicted RBP19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 NUDCD3Q8IVD9 361 aa19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 GNL1P36915 607 aaPredicted RBP19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 CASS4Q9NQ75 786 aa19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 PARVAQ9NVD7 372 aa19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 ANKRD65E5RJM6 399 aa19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 BRAFP15056 766 aa19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 ARFIP2P53365 341 aa19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 TTC23LQ6PF05 361 aa19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 FARP1Q9Y4F1 1045 aaPredicted RBP19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 LRRC14Q15048 493 aa19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 CC2D1AQ6P1N0 951 aaPredicted RBP19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 DDIASQ8IXT1 998 aa19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 OR6P1Q8NGX9 317 aa19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 SFMBT1Q9UHJ3 866 aa19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 SNX5Q9Y5X3 404 aa19.03■□□□□ 0.64
ARHGEF28-203ENST00000426542 TEX33O43247 280 aa19.02■□□□□ 0.64
ARHGEF28-203ENST00000426542 RCAN1P53805 252 aa19.02■□□□□ 0.64
ARHGEF28-203ENST00000426542 CACNB2Q08289 660 aaPredicted RBP19.02■□□□□ 0.64
ARHGEF28-203ENST00000426542 DHX40Q8IX18 779 aaKnown RBP19.02■□□□□ 0.64
ARHGEF28-203ENST00000426542 APOL1O14791 398 aa19.02■□□□□ 0.64
ARHGEF28-203ENST00000426542 FASTKD1Q53R41 847 aaKnown RBP19.02■□□□□ 0.64
ARHGEF28-203ENST00000426542 BTBD8Q5XKL5 378 aa19.02■□□□□ 0.64
ARHGEF28-203ENST00000426542 MARCH10Q8NA82 808 aaPredicted RBP19.02■□□□□ 0.64
ARHGEF28-203ENST00000426542 CEP70Q8NHQ1 597 aa19.02■□□□□ 0.64
ARHGEF28-203ENST00000426542 PBXIP1Q96AQ6 731 aa19.02■□□□□ 0.64
ARHGEF28-203ENST00000426542 NR1H4Q96RI1 486 aaPredicted RBP19.02■□□□□ 0.64
ARHGEF28-203ENST00000426542 NPHP3-ACAD11A0A0J9YXS1 232 aa19.02■□□□□ 0.64
ARHGEF28-203ENST00000426542 TEDDM1Q5T9Z0 273 aa19.02■□□□□ 0.64
ARHGEF28-203ENST00000426542 IZUMO3Q5VZ72 239 aa19.02■□□□□ 0.64
ARHGEF28-203ENST00000426542 KCNV2Q8TDN2 545 aa19.02■□□□□ 0.64
ARHGEF28-203ENST00000426542 LRRC37BQ96QE4 947 aa19.02■□□□□ 0.64
ARHGEF28-203ENST00000426542 DNAJC6O75061 913 aa19.02■□□□□ 0.63
ARHGEF28-203ENST00000426542 CDH6P55285 790 aa19.02■□□□□ 0.63
ARHGEF28-203ENST00000426542 HNRNPH2P55795 449 aaKnown RBP19.02■□□□□ 0.63
ARHGEF28-203ENST00000426542 FLOT2Q14254 428 aa19.02■□□□□ 0.63
ARHGEF28-203ENST00000426542 E2F4Q16254 413 aa19.02■□□□□ 0.63
ARHGEF28-203ENST00000426542 ZC3H12BQ5HYM0 836 aaKnown RBP19.02■□□□□ 0.63
ARHGEF28-203ENST00000426542 TRIM72Q6ZMU5 477 aa19.02■□□□□ 0.63
ARHGEF28-203ENST00000426542 GLYCTKQ8IVS8 523 aa19.02■□□□□ 0.63
ARHGEF28-203ENST00000426542 ATXN7L3BQ96GX2 97 aa19.02■□□□□ 0.63
ARHGEF28-203ENST00000426542 CCDC90BQ9GZT6 254 aa19.02■□□□□ 0.63
ARHGEF28-203ENST00000426542 CDHR2Q9BYE9 1310 aa19.02■□□□□ 0.63
ARHGEF28-203ENST00000426542 TTC26A0AVF1 554 aa19.02■□□□□ 0.63
ARHGEF28-203ENST00000426542 CFAP69A5D8W1 941 aa19.02■□□□□ 0.63
ARHGEF28-203ENST00000426542 GMNCA6NCL1 334 aa19.02■□□□□ 0.63
ARHGEF28-203ENST00000426542 PIK3R2O00459 728 aa19.02■□□□□ 0.63
ARHGEF28-203ENST00000426542 NCAPHQ15003 741 aa19.02■□□□□ 0.63
ARHGEF28-203ENST00000426542 TAF1DQ9H5J8 278 aaPredicted RBP19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms