RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 VCPKMTQ9H867 229 aa14.41□□□□□ -0.1
USP42-203ENST00000426246 ARHGEF10LQ9HCE6 1279 aa14.41□□□□□ -0.1
USP42-203ENST00000426246 CLDN3O15551 220 aa14.41□□□□□ -0.1
USP42-203ENST00000426246 MEFVO15553 781 aaPredicted RBP14.41□□□□□ -0.1
USP42-203ENST00000426246 ZNF844Q08AG5 666 aa14.41□□□□□ -0.1
USP42-203ENST00000426246 LNX1Q8TBB1 728 aaPredicted RBP14.41□□□□□ -0.1
USP42-203ENST00000426246 WHAMMQ8TF30 809 aa14.41□□□□□ -0.1
USP42-203ENST00000426246 PRMT1Q99873 361 aaKnown RBP14.41□□□□□ -0.1
USP42-203ENST00000426246 DEFB129Q9H1M3 183 aa14.41□□□□□ -0.1
USP42-203ENST00000426246 EPN3Q9H201 632 aa14.41□□□□□ -0.1
USP42-203ENST00000426246 GANQ9H2C0 597 aa14.41□□□□□ -0.1
USP42-203ENST00000426246 SPON1Q9HCB6 807 aa14.41□□□□□ -0.1
USP42-203ENST00000426246 INTS9Q9NV88 658 aaKnown RBP14.41□□□□□ -0.1
USP42-203ENST00000426246 CCPG1Q9ULG6 757 aa14.41□□□□□ -0.1
USP42-203ENST00000426246 GMNCA6NCL1 334 aa14.4□□□□□ -0.1
USP42-203ENST00000426246 GOLGA8SH3BPF8 625 aa14.4□□□□□ -0.1
USP42-203ENST00000426246 GOLGA8MH3BSY2 632 aa14.4□□□□□ -0.1
USP42-203ENST00000426246 HIRAP54198 1017 aaPredicted RBP14.4□□□□□ -0.1
USP42-203ENST00000426246 GPRC5DQ9NZD1 345 aa14.4□□□□□ -0.1
USP42-203ENST00000426246 WDR91A4D1P6 747 aa14.4□□□□□ -0.1
USP42-203ENST00000426246 PI4K2BG5E9Z4 385 aa14.4□□□□□ -0.1
USP42-203ENST00000426246 IPO5O00410 1097 aaKnown RBP14.4□□□□□ -0.1
USP42-203ENST00000426246 PLA2G6O60733 806 aa14.4□□□□□ -0.1
USP42-203ENST00000426246 SGPL1O95470 568 aa14.4□□□□□ -0.1
USP42-203ENST00000426246 ATF7P17544 494 aaPredicted RBP14.4□□□□□ -0.1
USP42-203ENST00000426246 RPA1P27694 616 aa14.4□□□□□ -0.1
USP42-203ENST00000426246 SOX5P35711 763 aa14.4□□□□□ -0.1
USP42-203ENST00000426246 GKAP1Q5VSY0 366 aaPredicted RBP14.4□□□□□ -0.1
USP42-203ENST00000426246 ALG3Q92685 438 aa14.4□□□□□ -0.1
USP42-203ENST00000426246 RAVER2Q9HCJ3 691 aaKnown RBP14.4□□□□□ -0.1
USP42-203ENST00000426246 GRIN2DO15399 1336 aa14.4□□□□□ -0.1
USP42-203ENST00000426246 CHN1P15882 459 aa14.4□□□□□ -0.1
USP42-203ENST00000426246 FERP16591 822 aa14.4□□□□□ -0.1
USP42-203ENST00000426246 TNNI1P19237 187 aa14.4□□□□□ -0.1
USP42-203ENST00000426246 TNFAIP1Q13829 316 aa14.4□□□□□ -0.1
USP42-203ENST00000426246 PADI6Q6TGC4 694 aa14.4□□□□□ -0.1
USP42-203ENST00000426246 MMS22LQ6ZRQ5 1243 aa14.4□□□□□ -0.1
USP42-203ENST00000426246 IQCKQ8N0W5 287 aa14.4□□□□□ -0.1
USP42-203ENST00000426246 CPA5Q8WXQ8 436 aa14.4□□□□□ -0.1
USP42-203ENST00000426246 RAPGEF5Q92565 580 aa14.4□□□□□ -0.1
USP42-203ENST00000426246 WDR11Q9BZH6 1224 aa14.4□□□□□ -0.1
USP42-203ENST00000426246 CEP83Q9Y592 693 aa14.4□□□□□ -0.1
USP42-203ENST00000426246 POC1B-GALNT4F8VUJ3 575 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 ASNSP08243 561 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 COMTP21964 271 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 HOXD13P35453 343 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 PPP2R2AP63151 447 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 ASTE1Q2TB18 679 aaPredicted RBP14.39□□□□□ -0.11
USP42-203ENST00000426246 NBPF12Q5TAG4 269 aaPredicted RBP14.39□□□□□ -0.11
USP42-203ENST00000426246 WDR78Q5VTH9 848 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 EEPD1Q7L9B9 569 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 GPC2Q8N158 579 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 TRIM7Q9C029 511 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 RANBP17Q9H2T7 1088 aaKnown RBP14.39□□□□□ -0.11
USP42-203ENST00000426246 CTNNAL1Q9UBT7 734 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 ANKRD62A6NC57 917 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 LMNB1P20700 586 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 ADCY8P40145 1251 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 DYNLT1P63172 113 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 ZCWPW2Q504Y3 356 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 CCDC137Q6PK04 289 aaKnown RBP14.39□□□□□ -0.11
USP42-203ENST00000426246 ARHGEF19Q8IW93 802 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 SYT2Q8N9I0 419 aaPredicted RBP14.39□□□□□ -0.11
USP42-203ENST00000426246 C9orf72Q96LT7 481 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 PPP1R16BQ96T49 567 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 METTL14Q9HCE5 456 aaKnown RBP14.39□□□□□ -0.11
USP42-203ENST00000426246 ASTN1O14525 1302 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 RBBP6Q7Z6E9 1792 aaKnown RBP14.39□□□□□ -0.11
USP42-203ENST00000426246 CDK17Q00537 523 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 SLC47A2Q86VL8 602 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 SYCE1Q8N0S2 351 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 MBOAT7Q96N66 472 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 ANKFY1Q9P2R3 1169 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 ZNF112Q9UJU3 913 aa14.39□□□□□ -0.11
USP42-203ENST00000426246 TGFB1I1O43294 461 aa14.38□□□□□ -0.11
USP42-203ENST00000426246 GBP2P32456 591 aaPredicted RBP14.38□□□□□ -0.11
USP42-203ENST00000426246 POMGNT1Q8WZA1 660 aa14.38□□□□□ -0.11
USP42-203ENST00000426246 WDR18Q9BV38 432 aa14.38□□□□□ -0.11
USP42-203ENST00000426246 SAMD15Q9P1V8 674 aa14.38□□□□□ -0.11
USP42-203ENST00000426246 WRAP73Q9P2S5 460 aaPredicted RBP14.38□□□□□ -0.11
USP42-203ENST00000426246 WDR90Q96KV7 1748 aa14.38□□□□□ -0.11
USP42-203ENST00000426246 SLITRK3O94933 977 aa14.38□□□□□ -0.11
USP42-203ENST00000426246 BCRP11274 1271 aa14.38□□□□□ -0.11
USP42-203ENST00000426246 PSMC4P43686 418 aa14.38□□□□□ -0.11
USP42-203ENST00000426246 OSTNP61366 133 aa14.38□□□□□ -0.11
USP42-203ENST00000426246 NUGGCQ68CJ6 796 aa14.38□□□□□ -0.11
USP42-203ENST00000426246 PHLDB3Q6NSJ2 640 aa14.38□□□□□ -0.11
USP42-203ENST00000426246 CBWD2Q8IUF1 395 aa14.38□□□□□ -0.11
USP42-203ENST00000426246 UBL4BQ8N7F7 174 aa14.38□□□□□ -0.11
USP42-203ENST00000426246 RNF25Q96BH1 459 aaPredicted RBP14.38□□□□□ -0.11
USP42-203ENST00000426246 PBKQ96KB5 322 aa14.38□□□□□ -0.11
USP42-203ENST00000426246 DDX23Q9BUQ8 820 aaKnown RBP14.38□□□□□ -0.11
USP42-203ENST00000426246 ISCUQ9H1K1 167 aa14.38□□□□□ -0.11
USP42-203ENST00000426246 MTRF1LQ9UGC7 380 aaKnown RBP14.38□□□□□ -0.11
USP42-203ENST00000426246 RASAL2Q9UJF2 1139 aa14.38□□□□□ -0.11
USP42-203ENST00000426246 HMGB1P1B2RPK0 211 aaPredicted RBP14.38□□□□□ -0.11
USP42-203ENST00000426246 HNRNPH3P31942 346 aaKnown RBP14.38□□□□□ -0.11
USP42-203ENST00000426246 MXI1P50539 228 aa14.38□□□□□ -0.11
USP42-203ENST00000426246 NAA25Q14CX7 972 aa14.38□□□□□ -0.11
USP42-203ENST00000426246 EPHA7Q15375 998 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms