RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 TRBV23-1A0A0A0MS06 115 aa3.51□□□□□ -1.85
R3HDM1-205ENST00000425804 CFBP00751 764 aa3.51□□□□□ -1.85
R3HDM1-205ENST00000425804 HLA-DOAP06340 250 aa3.51□□□□□ -1.85
R3HDM1-205ENST00000425804 SRGAP2CP0DJJ0 459 aa3.51□□□□□ -1.85
R3HDM1-205ENST00000425804 CCT4P50991 539 aaKnown RBP3.51□□□□□ -1.85
R3HDM1-205ENST00000425804 SSRP1Q08945 709 aaKnown RBP3.51□□□□□ -1.85
R3HDM1-205ENST00000425804 MTERF2Q49AM1 385 aa3.51□□□□□ -1.85
R3HDM1-205ENST00000425804 FSTL4Q6MZW2 842 aa3.51□□□□□ -1.85
R3HDM1-205ENST00000425804 CKAP2LQ8IYA6 745 aa3.51□□□□□ -1.85
R3HDM1-205ENST00000425804 PCDH19Q8TAB3 1148 aa3.51□□□□□ -1.85
R3HDM1-205ENST00000425804 SREK1Q8WXA9 508 aaKnown RBP3.51□□□□□ -1.85
R3HDM1-205ENST00000425804 DPF1Q92782 380 aa3.51□□□□□ -1.85
R3HDM1-205ENST00000425804 ERCC4Q92889 916 aaPredicted RBP3.51□□□□□ -1.85
R3HDM1-205ENST00000425804 EXOC2Q96KP1 924 aa3.51□□□□□ -1.85
R3HDM1-205ENST00000425804 C8orf37Q96NL8 207 aa3.51□□□□□ -1.85
R3HDM1-205ENST00000425804 KCNH7Q9NS40 1196 aa3.51□□□□□ -1.85
R3HDM1-205ENST00000425804 ASB6Q9NWX5 421 aa3.51□□□□□ -1.85
R3HDM1-205ENST00000425804 DNAI1Q9UI46 699 aa3.51□□□□□ -1.85
R3HDM1-205ENST00000425804 MAP3K2Q9Y2U5 619 aa3.51□□□□□ -1.85
R3HDM1-205ENST00000425804 PCDHA9Q9Y5H5 950 aa3.51□□□□□ -1.85
R3HDM1-205ENST00000425804 FAM221BA6H8Z2 402 aa3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 DAPK3O43293 454 aa3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 MTSS1O43312 755 aa3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 HNRNPLP14866 589 aaKnown RBP eCLIP3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 FDXRP22570 491 aa3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 KRTAP10-5P60370 271 aa3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 NHLH2Q02577 135 aa3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 RASGRF1Q13972 1273 aa3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 PDCD4Q53EL6 469 aaKnown RBP3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 DLK2Q6UY11 383 aa3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 PTF1AQ7RTS3 328 aa3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 TECPR1Q7Z6L1 1165 aa3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 MTDHQ86UE4 582 aaKnown RBP3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 NOSTRINQ8IVI9 506 aa3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 DHX37Q8IY37 1157 aaKnown RBP3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 ANKRD13AQ8IZ07 590 aa3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 ZBTB38Q8NAP3 1195 aaPredicted RBP3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 SMRP1Q8NCR6 262 aa3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 PTPRN2Q92932 1015 aa3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 DYDC2Q96IM9 177 aa3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 PPP1R10Q96QC0 940 aaKnown RBP3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 CDC6Q99741 560 aa3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 FOXB1Q99853 325 aa3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 HIRIP3Q9BW71 556 aaPredicted RBP3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 TANGO6Q9C0B7 1094 aa3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 ENKD1Q9H0I2 346 aa3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 ACSS2Q9NR19 701 aa3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 POLR3BQ9NW08 1133 aaPredicted RBP3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 SLC17A6Q9P2U8 582 aa3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 PPP1R1BQ9UD71 204 aaPredicted RBP3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 BICRAQ9NZM4 1560 aa3.5□□□□□ -1.85
R3HDM1-205ENST00000425804 ZNF804BA4D1E1 1349 aa3.49□□□□□ -1.85
R3HDM1-205ENST00000425804 KDM2BQ8NHM5 1336 aa3.49□□□□□ -1.85
R3HDM1-205ENST00000425804 ZNF521Q96K83 1311 aa3.49□□□□□ -1.85
R3HDM1-205ENST00000425804 MARCH11A6NNE9 402 aa3.49□□□□□ -1.85
R3HDM1-205ENST00000425804 DIRC3C9JPN6 131 aa3.49□□□□□ -1.85
R3HDM1-205ENST00000425804 RASGRP1O95267 797 aa3.49□□□□□ -1.85
R3HDM1-205ENST00000425804 CRTAMO95727 393 aa3.49□□□□□ -1.85
R3HDM1-205ENST00000425804 SDHAP31040 664 aa3.49□□□□□ -1.85
R3HDM1-205ENST00000425804 GTF2F1P35269 517 aaKnown RBP eCLIP3.49□□□□□ -1.85
R3HDM1-205ENST00000425804 GUCY1A3Q02108 690 aa3.49□□□□□ -1.85
R3HDM1-205ENST00000425804 SCAPQ12770 1279 aa3.49□□□□□ -1.85
R3HDM1-205ENST00000425804 RESTQ13127 1097 aa3.49□□□□□ -1.85
R3HDM1-205ENST00000425804 RAPGEF1Q13905 1077 aa3.49□□□□□ -1.85
R3HDM1-205ENST00000425804 MTX3Q5HYI7 312 aa3.49□□□□□ -1.85
R3HDM1-205ENST00000425804 Q6ZNX1 250 aa3.49□□□□□ -1.85
R3HDM1-205ENST00000425804 RTN4RL1Q86UN2 441 aaPredicted RBP3.49□□□□□ -1.85
R3HDM1-205ENST00000425804 ADAMTS15Q8TE58 950 aa3.49□□□□□ -1.85
R3HDM1-205ENST00000425804 UBXN4Q92575 508 aa3.49□□□□□ -1.85
R3HDM1-205ENST00000425804 ZNF669Q96BR6 464 aaPredicted RBP3.49□□□□□ -1.85
R3HDM1-205ENST00000425804 FOXRED1Q96CU9 486 aaPredicted RBP3.49□□□□□ -1.85
R3HDM1-205ENST00000425804 Q96MF0 132 aa3.49□□□□□ -1.85
R3HDM1-205ENST00000425804 CCDC113Q9H0I3 377 aa3.49□□□□□ -1.85
R3HDM1-205ENST00000425804 IL17RBQ9NRM6 502 aa3.49□□□□□ -1.85
R3HDM1-205ENST00000425804 MANSC4A6NHS7 340 aaPredicted RBP3.48□□□□□ -1.85
R3HDM1-205ENST00000425804 ARVCFO00192 962 aa3.48□□□□□ -1.85
R3HDM1-205ENST00000425804 ATP2B1P20020 1258 aa3.48□□□□□ -1.85
R3HDM1-205ENST00000425804 RGS3P49796 1198 aa3.48□□□□□ -1.85
R3HDM1-205ENST00000425804 DNM2P50570 870 aa3.48□□□□□ -1.85
R3HDM1-205ENST00000425804 SUMO1P63165 101 aaKnown RBP3.48□□□□□ -1.85
R3HDM1-205ENST00000425804 SSBP2P81877 361 aaPredicted RBP3.48□□□□□ -1.85
R3HDM1-205ENST00000425804 SERINC3Q13530 473 aa3.48□□□□□ -1.85
R3HDM1-205ENST00000425804 RASA3Q14644 834 aa3.48□□□□□ -1.85
R3HDM1-205ENST00000425804 SF3A1Q15459 793 aaKnown RBP3.48□□□□□ -1.85
R3HDM1-205ENST00000425804 CATSPEREQ5SY80 951 aa3.48□□□□□ -1.85
R3HDM1-205ENST00000425804 DOK3Q7L591 496 aa3.48□□□□□ -1.85
R3HDM1-205ENST00000425804 DPH6Q7L8W6 267 aa3.48□□□□□ -1.85
R3HDM1-205ENST00000425804 SYT12Q8IV01 421 aa3.48□□□□□ -1.85
R3HDM1-205ENST00000425804 PDLIM2Q96JY6 352 aa3.48□□□□□ -1.85
R3HDM1-205ENST00000425804 DHRS4Q9BTZ2 278 aa3.48□□□□□ -1.85
R3HDM1-205ENST00000425804 VPS33BQ9H267 617 aa3.48□□□□□ -1.85
R3HDM1-205ENST00000425804 SLC52A2Q9HAB3 445 aa3.48□□□□□ -1.85
R3HDM1-205ENST00000425804 HDAC5Q9UQL6 1122 aa3.48□□□□□ -1.85
R3HDM1-205ENST00000425804 COQ6Q9Y2Z9 468 aa3.48□□□□□ -1.85
R3HDM1-205ENST00000425804 MRPS23Q9Y3D9 190 aaKnown RBP3.48□□□□□ -1.85
R3HDM1-205ENST00000425804 ARID4BQ4LE39 1312 aaPredicted RBP3.47□□□□□ -1.85
R3HDM1-205ENST00000425804 CCDC187A0A096LP49 1063 aa3.47□□□□□ -1.85
R3HDM1-205ENST00000425804 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.47□□□□□ -1.85
R3HDM1-205ENST00000425804 CCDC66A2RUB6 948 aa3.47□□□□□ -1.85
R3HDM1-205ENST00000425804 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms