RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 DSC3Q14574 896 aa14.16□□□□□ -0.14
SGCE-203ENST00000425444 ZNF174Q15697 407 aa14.16□□□□□ -0.14
SGCE-203ENST00000425444 FAM102BQ5T8I3 360 aa14.16□□□□□ -0.14
SGCE-203ENST00000425444 ZC3H14Q6PJT7 736 aaKnown RBP14.16□□□□□ -0.14
SGCE-203ENST00000425444 CATSPER4Q7RTX7 472 aa14.16□□□□□ -0.14
SGCE-203ENST00000425444 TMC7Q7Z402 723 aa14.16□□□□□ -0.14
SGCE-203ENST00000425444 KSR1Q8IVT5 923 aa14.16□□□□□ -0.14
SGCE-203ENST00000425444 ABI1Q8IZP0 508 aa14.16□□□□□ -0.14
SGCE-203ENST00000425444 TCP11Q8WWU5 503 aa14.16□□□□□ -0.14
SGCE-203ENST00000425444 MRPS27Q92552 414 aaKnown RBP14.16□□□□□ -0.14
SGCE-203ENST00000425444 TMEM143Q96AN5 459 aa14.16□□□□□ -0.14
SGCE-203ENST00000425444 TMX3Q96JJ7 454 aa14.16□□□□□ -0.14
SGCE-203ENST00000425444 MTMR9Q96QG7 549 aa14.16□□□□□ -0.14
SGCE-203ENST00000425444 MTRQ99707 1265 aa14.16□□□□□ -0.14
SGCE-203ENST00000425444 DHX33Q9H6R0 707 aaKnown RBP14.16□□□□□ -0.14
SGCE-203ENST00000425444 ELAC1Q9H777 363 aaKnown RBP14.16□□□□□ -0.14
SGCE-203ENST00000425444 TYW1Q9NV66 732 aaKnown RBP14.16□□□□□ -0.14
SGCE-203ENST00000425444 DACT1Q9NYF0 836 aa14.16□□□□□ -0.14
SGCE-203ENST00000425444 PIN4Q9Y237 131 aaKnown RBP14.16□□□□□ -0.14
SGCE-203ENST00000425444 LZTS1Q9Y250 596 aa14.16□□□□□ -0.14
SGCE-203ENST00000425444 HCFC2Q9Y5Z7 792 aa14.16□□□□□ -0.14
SGCE-203ENST00000425444 FRYQ5TBA9 3013 aa14.15□□□□□ -0.14
SGCE-203ENST00000425444 ZZEF1O43149 2961 aa14.15□□□□□ -0.14
SGCE-203ENST00000425444 OR52Z1P0C646 297 aa14.15□□□□□ -0.14
SGCE-203ENST00000425444 RFX1P22670 979 aa14.15□□□□□ -0.14
SGCE-203ENST00000425444 MCM2P49736 904 aa14.15□□□□□ -0.14
SGCE-203ENST00000425444 RARS2Q5T160 578 aaKnown RBP14.15□□□□□ -0.14
SGCE-203ENST00000425444 TWF2Q6IBS0 349 aaKnown RBP14.15□□□□□ -0.14
SGCE-203ENST00000425444 ERMNQ8TAM6 284 aa14.15□□□□□ -0.14
SGCE-203ENST00000425444 TBC1D32Q96NH3 1257 aa14.15□□□□□ -0.14
SGCE-203ENST00000425444 USTQ9Y2C2 406 aa14.15□□□□□ -0.14
SGCE-203ENST00000425444 SETXQ7Z333 2677 aaKnown RBP14.15□□□□□ -0.14
SGCE-203ENST00000425444 H3BQV1 296 aa14.14□□□□□ -0.15
SGCE-203ENST00000425444 ZBTB39O15060 712 aa14.14□□□□□ -0.15
SGCE-203ENST00000425444 CD2BP2O95400 341 aaKnown RBP14.14□□□□□ -0.15
SGCE-203ENST00000425444 EOMESO95936 686 aa14.14□□□□□ -0.15
SGCE-203ENST00000425444 SRGAP2CP0DJJ0 459 aa14.14□□□□□ -0.15
SGCE-203ENST00000425444 TRAPPC10P48553 1259 aa14.14□□□□□ -0.15
SGCE-203ENST00000425444 TDGQ13569 410 aa14.14□□□□□ -0.15
SGCE-203ENST00000425444 ATAT1Q5SQI0 421 aa14.14□□□□□ -0.15
SGCE-203ENST00000425444 KIAA0319Q5VV43 1072 aa14.14□□□□□ -0.15
SGCE-203ENST00000425444 MCTP1Q6DN14 999 aa14.14□□□□□ -0.15
SGCE-203ENST00000425444 ECHDC2Q86YB7 292 aa14.14□□□□□ -0.15
SGCE-203ENST00000425444 C12orf76Q8N812 135 aaPredicted RBP14.14□□□□□ -0.15
SGCE-203ENST00000425444 HSD17B14Q9BPX1 270 aa14.14□□□□□ -0.15
SGCE-203ENST00000425444 ASAP2O43150 1006 aa14.13□□□□□ -0.15
SGCE-203ENST00000425444 DGAT1O75907 488 aa14.13□□□□□ -0.15
SGCE-203ENST00000425444 LYPLA2O95372 231 aa14.13□□□□□ -0.15
SGCE-203ENST00000425444 LAG3P18627 525 aa14.13□□□□□ -0.15
SGCE-203ENST00000425444 SDHBP21912 280 aa14.13□□□□□ -0.15
SGCE-203ENST00000425444 GJB2P29033 226 aa14.13□□□□□ -0.15
SGCE-203ENST00000425444 PHKA2P46019 1235 aa14.13□□□□□ -0.15
SGCE-203ENST00000425444 ATXN1P54253 815 aaKnown RBP14.13□□□□□ -0.15
SGCE-203ENST00000425444 FAM189BP81408 668 aa14.13□□□□□ -0.15
SGCE-203ENST00000425444 PLCB3Q01970 1234 aa14.13□□□□□ -0.15
SGCE-203ENST00000425444 LAMTOR4Q0VGL1 99 aa14.13□□□□□ -0.15
SGCE-203ENST00000425444 NBR1Q14596 966 aa14.13□□□□□ -0.15
SGCE-203ENST00000425444 KIAA1841Q6NSI8 718 aa14.13□□□□□ -0.15
SGCE-203ENST00000425444 LRRC43Q8N309 656 aa14.13□□□□□ -0.15
SGCE-203ENST00000425444 RNF149Q8NC42 400 aa14.13□□□□□ -0.15
SGCE-203ENST00000425444 PIGOQ8TEQ8 1089 aa14.13□□□□□ -0.15
SGCE-203ENST00000425444 PRPF31Q8WWY3 499 aaKnown RBP14.13□□□□□ -0.15
SGCE-203ENST00000425444 ACSF2Q96CM8 615 aaPredicted RBP14.13□□□□□ -0.15
SGCE-203ENST00000425444 CHAMP1Q96JM3 812 aa14.13□□□□□ -0.15
SGCE-203ENST00000425444 TMEM117Q9H0C3 514 aa14.13□□□□□ -0.15
SGCE-203ENST00000425444 CHST12Q9NRB3 414 aa14.13□□□□□ -0.15
SGCE-203ENST00000425444 ANKEF1Q9NU02 776 aa14.13□□□□□ -0.15
SGCE-203ENST00000425444 RALYQ9UKM9 306 aaKnown RBP14.13□□□□□ -0.15
SGCE-203ENST00000425444 DUSP12Q9UNI6 340 aa14.13□□□□□ -0.15
SGCE-203ENST00000425444 FANCMQ8IYD8 2048 aa14.13□□□□□ -0.15
SGCE-203ENST00000425444 ARID2Q68CP9 1835 aa14.13□□□□□ -0.15
SGCE-203ENST00000425444 A0A0U1RQF3 1178 aa14.12□□□□□ -0.15
SGCE-203ENST00000425444 USO1O60763 962 aaKnown RBP14.12□□□□□ -0.15
SGCE-203ENST00000425444 U2AF2P26368 475 aaKnown RBP eCLIP14.12□□□□□ -0.154e-7■■□□□ 11.5
SGCE-203ENST00000425444 CA8P35219 290 aa14.12□□□□□ -0.15
SGCE-203ENST00000425444 RARRES1P49788 294 aa14.12□□□□□ -0.15
SGCE-203ENST00000425444 KRT17Q04695 432 aa14.12□□□□□ -0.15
SGCE-203ENST00000425444 TFDP1Q14186 410 aa14.12□□□□□ -0.15
SGCE-203ENST00000425444 HAUS3Q68CZ6 603 aa14.12□□□□□ -0.15
SGCE-203ENST00000425444 KANK3Q6NY19 840 aa14.12□□□□□ -0.15
SGCE-203ENST00000425444 SRGAP1Q7Z6B7 1085 aa14.12□□□□□ -0.15
SGCE-203ENST00000425444 FERMT3Q86UX7 667 aa14.12□□□□□ -0.15
SGCE-203ENST00000425444 CWH43Q9H720 699 aa14.12□□□□□ -0.15
SGCE-203ENST00000425444 IFT122Q9HBG6 1241 aa14.12□□□□□ -0.15
SGCE-203ENST00000425444 TUFT1Q9NNX1 390 aa14.12□□□□□ -0.15
SGCE-203ENST00000425444 SMC3Q9UQE7 1217 aa14.12□□□□□ -0.15
SGCE-203ENST00000425444 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.12□□□□□ -0.15
SGCE-203ENST00000425444 CLASP2O75122 1294 aaKnown RBP14.11□□□□□ -0.15
SGCE-203ENST00000425444 MED24O75448 989 aa14.11□□□□□ -0.15
SGCE-203ENST00000425444 ERLIN2O94905 339 aa14.11□□□□□ -0.15
SGCE-203ENST00000425444 SP9P0CG40 484 aa14.11□□□□□ -0.15
SGCE-203ENST00000425444 SKIP12755 728 aa14.11□□□□□ -0.15
SGCE-203ENST00000425444 RAB27AP51159 221 aa14.11□□□□□ -0.15
SGCE-203ENST00000425444 COL9A2Q14055 689 aaPredicted RBP14.11□□□□□ -0.15
SGCE-203ENST00000425444 MXD4Q14582 209 aaPredicted RBP14.11□□□□□ -0.15
SGCE-203ENST00000425444 SMC1AQ14683 1233 aaKnown RBP14.11□□□□□ -0.15
SGCE-203ENST00000425444 SPECC1Q5M775 1068 aa14.11□□□□□ -0.15
SGCE-203ENST00000425444 POTEGQ6S5H5 508 aa14.11□□□□□ -0.15
SGCE-203ENST00000425444 CATSPER3Q86XQ3 398 aa14.11□□□□□ -0.15
SGCE-203ENST00000425444 MRPL43Q8N983 215 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms