RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 MEFVO15553 781 aaPredicted RBP11.78□□□□□ -0.52
TNC-203ENST00000423613 TBC1D4O60343 1298 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 HSPA6P17066 643 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 LTKP29376 864 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 EMBQ6PCB8 327 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 WDR48Q8TAF3 677 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 ZNF473Q8WTR7 871 aaKnown RBP11.78□□□□□ -0.52
TNC-203ENST00000423613 PDCD6IPQ8WUM4 868 aaKnown RBP11.78□□□□□ -0.52
TNC-203ENST00000423613 CFAP65Q6ZU64 1925 aaKnown RBP11.78□□□□□ -0.52
TNC-203ENST00000423613 RSPH10B2B2RC85 870 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 RSPH10BP0C881 870 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 PLCG1P19174 1290 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 PMLP29590 882 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 KDSRQ06136 332 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 PUDPQ08623 228 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 RABGAP1LQ5R372 815 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 SFR1Q86XK3 245 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 TTLL6Q8N841 843 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 EPAS1Q99814 870 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 WDR11Q9BZH6 1224 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 EMILIN3Q9NT22 766 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 SPATA2Q9UM82 520 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 SRPRBQ9Y5M8 271 aaKnown RBP11.78□□□□□ -0.52
TNC-203ENST00000423613 TMEM247A6NEH6 219 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 AKAP10O43572 662 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 UBE2SQ16763 222 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 UNC45BQ8IWX7 931 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 AIFM3Q96NN9 605 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 PRPF3O43395 683 aaKnown RBP11.78□□□□□ -0.52
TNC-203ENST00000423613 CCNE1P24864 410 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 ZBED6P86452 979 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 CENPUQ71F23 418 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 SCN4BQ8IWT1 228 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 RTKN2Q8IZC4 609 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 DYNLL2Q96FJ2 89 aa11.78□□□□□ -0.52
TNC-203ENST00000423613 CYP2D7A0A087X1C5 515 aa11.77□□□□□ -0.52
TNC-203ENST00000423613 SERPING1P05155 500 aa11.77□□□□□ -0.52
TNC-203ENST00000423613 MYL1P05976 194 aa11.77□□□□□ -0.52
TNC-203ENST00000423613 TCF3P15923 654 aa11.77□□□□□ -0.52
TNC-203ENST00000423613 CD58P19256 250 aa11.77□□□□□ -0.52
TNC-203ENST00000423613 TAC1P20366 129 aa11.77□□□□□ -0.52
TNC-203ENST00000423613 PSMC6P62333 389 aa11.77□□□□□ -0.52
TNC-203ENST00000423613 RUNX1T1Q06455 604 aa11.77□□□□□ -0.52
TNC-203ENST00000423613 USP17L2Q6R6M4 530 aa11.77□□□□□ -0.52
TNC-203ENST00000423613 KCTD6Q8NC69 237 aa11.77□□□□□ -0.52
TNC-203ENST00000423613 TMEM206Q9H813 350 aa11.77□□□□□ -0.52
TNC-203ENST00000423613 RPF1Q9H9Y2 349 aaKnown RBP11.77□□□□□ -0.52
TNC-203ENST00000423613 ZSWIM5Q9P217 1185 aa11.77□□□□□ -0.52
TNC-203ENST00000423613 hCG_1984214I3L0E3 225 aa11.77□□□□□ -0.52
TNC-203ENST00000423613 NDUFA10O95299 355 aa11.77□□□□□ -0.52
TNC-203ENST00000423613 KRT16P08779 473 aa11.77□□□□□ -0.52
TNC-203ENST00000423613 IFNAR1P17181 557 aa11.77□□□□□ -0.52
TNC-203ENST00000423613 NNMTP40261 264 aa11.77□□□□□ -0.52
TNC-203ENST00000423613 NAA30Q147X3 362 aaPredicted RBP11.77□□□□□ -0.52
TNC-203ENST00000423613 NKX1-1Q15270 411 aaPredicted RBP11.77□□□□□ -0.52
TNC-203ENST00000423613 CCDC157Q569K6 752 aa11.77□□□□□ -0.52
TNC-203ENST00000423613 DNAJC24Q6P3W2 148 aa11.77□□□□□ -0.52
TNC-203ENST00000423613 ZNF713Q8N859 430 aaPredicted RBP11.77□□□□□ -0.52
TNC-203ENST00000423613 SRPK1Q96SB4 655 aaKnown RBP11.77□□□□□ -0.52
TNC-203ENST00000423613 SMAD5Q99717 465 aaKnown RBP11.77□□□□□ -0.52
TNC-203ENST00000423613 OSBPL10Q9BXB5 764 aa11.77□□□□□ -0.52
TNC-203ENST00000423613 EXOSC4Q9NPD3 245 aaKnown RBP11.77□□□□□ -0.52
TNC-203ENST00000423613 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.77□□□□□ -0.52
TNC-203ENST00000423613 GOLGA8RI6L899 631 aa11.77□□□□□ -0.53
TNC-203ENST00000423613 PSAPP07602 524 aa11.77□□□□□ -0.53
TNC-203ENST00000423613 USP17L8P0C7I0 530 aa11.77□□□□□ -0.53
TNC-203ENST00000423613 IL6STP40189 918 aaPredicted RBP11.77□□□□□ -0.53
TNC-203ENST00000423613 CLK1P49759 484 aaKnown RBP11.77□□□□□ -0.53
TNC-203ENST00000423613 PAPOLAP51003 745 aaKnown RBP11.77□□□□□ -0.53
TNC-203ENST00000423613 DCAF4L1Q3SXM0 396 aa11.77□□□□□ -0.53
TNC-203ENST00000423613 MFSD14CQ5VZR4 134 aa11.77□□□□□ -0.53
TNC-203ENST00000423613 CCDC81Q6ZN84 652 aa11.77□□□□□ -0.53
TNC-203ENST00000423613 AGR3Q8TD06 166 aa11.77□□□□□ -0.53
TNC-203ENST00000423613 AATKQ6ZMQ8 1374 aa11.77□□□□□ -0.53
TNC-203ENST00000423613 TMCC1O94876 653 aa11.77□□□□□ -0.53
TNC-203ENST00000423613 HSPA1AP0DMV8 641 aaKnown RBP11.77□□□□□ -0.53
TNC-203ENST00000423613 HSPA1BP0DMV9 641 aaKnown RBP11.77□□□□□ -0.53
TNC-203ENST00000423613 CYP27A1Q02318 531 aa11.77□□□□□ -0.53
TNC-203ENST00000423613 C16orf72Q14CZ0 275 aa11.77□□□□□ -0.53
TNC-203ENST00000423613 PPP6R3Q5H9R7 873 aaPredicted RBP11.77□□□□□ -0.53
TNC-203ENST00000423613 ARMCX2Q7L311 632 aa11.77□□□□□ -0.53
TNC-203ENST00000423613 CATSPER4Q7RTX7 472 aa11.77□□□□□ -0.53
TNC-203ENST00000423613 GCC2Q8IWJ2 1684 aa11.77□□□□□ -0.53
TNC-203ENST00000423613 LSM1O15116 133 aaKnown RBP11.77□□□□□ -0.53
TNC-203ENST00000423613 PLA2G4BP0C869 781 aa11.77□□□□□ -0.53
TNC-203ENST00000423613 CCND1P24385 295 aa11.77□□□□□ -0.53
TNC-203ENST00000423613 IFNA8P32881 189 aa11.77□□□□□ -0.53
TNC-203ENST00000423613 PMS2P54278 862 aa11.77□□□□□ -0.53
TNC-203ENST00000423613 DRP2Q13474 957 aa11.77□□□□□ -0.53
TNC-203ENST00000423613 CRYMQ14894 314 aa11.77□□□□□ -0.53
TNC-203ENST00000423613 IYDQ6PHW0 289 aa11.77□□□□□ -0.53
TNC-203ENST00000423613 TOGARAM2Q6ZUX3 1019 aa11.77□□□□□ -0.53
TNC-203ENST00000423613 RTL3Q8N8U3 475 aaKnown RBP11.77□□□□□ -0.53
TNC-203ENST00000423613 MID2Q9UJV3 735 aa11.77□□□□□ -0.53
TNC-203ENST00000423613 USP17L3A6NCW0 530 aa11.76□□□□□ -0.53
TNC-203ENST00000423613 USP17L4A6NCW7 530 aa11.76□□□□□ -0.53
TNC-203ENST00000423613 C16orf96A6NNT2 1141 aa11.76□□□□□ -0.53
TNC-203ENST00000423613 BMP3P12645 472 aa11.76□□□□□ -0.53
TNC-203ENST00000423613 PLOD1Q02809 727 aaPredicted RBP11.76□□□□□ -0.53
TNC-203ENST00000423613 KCTD21Q4G0X4 260 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms