RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 PDZD2O15018 2839 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 SPDYE5A6NIY4 337 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 ATP2C2O75185 946 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 PCDH8O95206 1070 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 IGHEP01854 428 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 SLC2A4P14672 509 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 CACNB3P54284 484 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 SIM1P81133 766 aaPredicted RBP3.84□□□□□ -1.79
TOP2A-201ENST00000423485 PPP2R3AQ06190 1150 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 GABPB1Q06547 395 aaPredicted RBP3.84□□□□□ -1.79
TOP2A-201ENST00000423485 MTHFSDQ2M296 383 aaKnown RBP3.84□□□□□ -1.79
TOP2A-201ENST00000423485 FAM83BQ5T0W9 1011 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 TDRD10Q5VZ19 366 aaKnown RBP3.84□□□□□ -1.79
TOP2A-201ENST00000423485 SLC39A5Q6ZMH5 540 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 PLA2G4DQ86XP0 818 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 LEMD2Q8NC56 503 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 NLRP4Q96MN2 994 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 TMEM39BQ9GZU3 492 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 ZSCAN16Q9H4T2 348 aaPredicted RBP3.84□□□□□ -1.79
TOP2A-201ENST00000423485 SLC24A3Q9HC58 644 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 TRPM5Q9NZQ8 1165 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 TRPV2Q9Y5S1 764 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 SIPA1L1O43166 1804 aa3.84□□□□□ -1.8
TOP2A-201ENST00000423485 H3BQ06 376 aaPredicted RBP3.84□□□□□ -1.8
TOP2A-201ENST00000423485 TBC1D12O60347 775 aa3.84□□□□□ -1.8
TOP2A-201ENST00000423485 MBL2P11226 248 aaPredicted RBP3.84□□□□□ -1.8
TOP2A-201ENST00000423485 ITKQ08881 620 aa3.84□□□□□ -1.8
TOP2A-201ENST00000423485 DMP1Q13316 513 aaPredicted RBP3.84□□□□□ -1.8
TOP2A-201ENST00000423485 UVSSAQ2YD98 709 aa3.84□□□□□ -1.8
TOP2A-201ENST00000423485 FNDC3BQ53EP0 1204 aaKnown RBP3.84□□□□□ -1.8
TOP2A-201ENST00000423485 LRRC31Q6UY01 552 aa3.84□□□□□ -1.8
TOP2A-201ENST00000423485 HDAC7Q8WUI4 952 aa3.84□□□□□ -1.8
TOP2A-201ENST00000423485 SKA2Q8WVK7 121 aaPredicted RBP3.84□□□□□ -1.8
TOP2A-201ENST00000423485 ZNF560Q96MR9 790 aa3.84□□□□□ -1.8
TOP2A-201ENST00000423485 SPON2Q9BUD6 331 aa3.84□□□□□ -1.8
TOP2A-201ENST00000423485 KIF17Q9P2E2 1029 aa3.84□□□□□ -1.8
TOP2A-201ENST00000423485 ELP1O95163 1332 aa3.84□□□□□ -1.8
TOP2A-201ENST00000423485 KATNA1O75449 491 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 KRT15P19012 456 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 CXCR2P25025 360 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 HTR1BP28222 390 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 TM4SF4P48230 202 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 SARSP49591 514 aaKnown RBP3.83□□□□□ -1.8
TOP2A-201ENST00000423485 JAK3P52333 1124 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 TMEM132DQ14C87 1099 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 POSTNQ15063 836 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 PLEKHG6Q3KR16 790 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 PPM1JQ5JR12 505 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 AEBP1Q8IUX7 1158 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 UBR7Q8N806 425 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.83□□□□□ -1.8
TOP2A-201ENST00000423485 KCNN1Q92952 543 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 PPP1R16AQ96I34 528 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 DNAJC1Q96KC8 554 aaKnown RBP3.83□□□□□ -1.8
TOP2A-201ENST00000423485 PALMDQ9NP74 551 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 NCKIPSDQ9NZQ3 722 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 NUP98P52948 1817 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 TRAV19A0A0A6YYK7 116 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 PDE2AO00408 941 aaPredicted RBP3.83□□□□□ -1.8
TOP2A-201ENST00000423485 N4BP3O15049 544 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 ADAMTS3O15072 1205 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 ANXA6P08133 673 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 ERVK-10P10266 1014 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 ADCY1Q08828 1119 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 C14orf28Q4W4Y0 310 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 SLC10A5Q5PT55 438 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 EMC10Q5UCC4 262 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 FAM46CQ5VWP2 391 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 LAIR1Q6GTX8 287 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 MFSD5Q6N075 450 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 PAOXQ6QHF9 649 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 RBMS3Q6XE24 437 aaKnown RBP3.83□□□□□ -1.8
TOP2A-201ENST00000423485 Q7L0L9 218 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 VASH1Q7L8A9 365 aaPredicted RBP3.83□□□□□ -1.8
TOP2A-201ENST00000423485 ZNF438Q7Z4V0 828 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 TFB1MQ8WVM0 346 aaKnown RBP3.83□□□□□ -1.8
TOP2A-201ENST00000423485 LRRC4Q9HBW1 653 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 STOML1Q9UBI4 398 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 CDH7Q9ULB5 785 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 ZFP37Q9Y6Q3 630 aaPredicted RBP3.83□□□□□ -1.8
TOP2A-201ENST00000423485 COL22A1Q8NFW1 1626 aaPredicted RBP3.83□□□□□ -1.8
TOP2A-201ENST00000423485 C2orf71A6NGG8 1288 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 ARHGEF9O43307 516 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 ATP5BP06576 529 aaKnown RBP3.83□□□□□ -1.8
TOP2A-201ENST00000423485 TNNI3P19429 210 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 KLRK1P26718 216 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 CDC25CP30307 473 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 CASP14P31944 242 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 SEMG2Q02383 582 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 KCNA10Q16322 511 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 ZNF423Q2M1K9 1284 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 NAALADL2Q58DX5 795 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 KLHL35Q6PF15 583 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 AMIGO3Q86WK7 504 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 SIX6OS1Q8N1H7 587 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 ARHGAP18Q8N392 663 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 TTC39CQ8N584 583 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 TRIM58Q8NG06 486 aa3.83□□□□□ -1.8
TOP2A-201ENST00000423485 ZNF396Q96N95 335 aaPredicted RBP3.83□□□□□ -1.8
TOP2A-201ENST00000423485 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.83□□□□□ -1.84e-13■■□□□ 12.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms