RNA–Protein interactions for RNA: ENST00000422875.5

TRAPPC10-203, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best)

Gene TRAPPC10, Length 5,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-203ENST00000422875 GNA15P30679 374 aa18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 KDSRQ06136 332 aa18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 SLFN12LQ6IEE8 588 aa18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 TRIM67Q6ZTA4 783 aa18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 TRPM8Q7Z2W7 1104 aa18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 FAM160B2Q86V87 743 aa18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 USP38Q8NB14 1042 aa18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 RUBCNQ92622 972 aa18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 ERP27Q96DN0 273 aa18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 ZNF668Q96K58 619 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 COA1Q9GZY4 146 aa18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 RPF1Q9H9Y2 349 aaKnown RBP18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 CD248Q9HCU0 757 aa18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 KYNUQ16719 465 aa18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 LONP2Q86WA8 852 aa18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 ATP11CQ8NB49 1132 aa18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 SLC40A1Q9NP59 571 aa18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 SLC9A2Q9UBY0 812 aa18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 PDS5AQ29RF7 1337 aaKnown RBP18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 AGR3Q8TD06 166 aa18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 EZH2Q15910 746 aaKnown RBP18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 LRRC36Q1X8D7 754 aa18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 JAMLQ86YT9 394 aa18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 GRAMD1AQ96CP6 724 aa18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 SEL1LQ9UBV2 794 aa18.64■□□□□ 0.57
TRAPPC10-203ENST00000422875 AK9Q5TCS8 1911 aa18.63■□□□□ 0.57
TRAPPC10-203ENST00000422875 CDH16O75309 829 aa18.63■□□□□ 0.57
TRAPPC10-203ENST00000422875 LRIG3Q6UXM1 1119 aa18.63■□□□□ 0.57
TRAPPC10-203ENST00000422875 HAUS6Q7Z4H7 955 aa18.63■□□□□ 0.57
TRAPPC10-203ENST00000422875 DACT3Q96B18 629 aaPredicted RBP18.63■□□□□ 0.57
TRAPPC10-203ENST00000422875 RBM15Q96T37 977 aaKnown RBP eCLIP18.63■□□□□ 0.572e-6■■■□□ 18.9
TRAPPC10-203ENST00000422875 KRT82Q9NSB4 513 aa18.63■□□□□ 0.57
TRAPPC10-203ENST00000422875 MADDQ8WXG6 1647 aa18.63■□□□□ 0.57
TRAPPC10-203ENST00000422875 ADGRL3Q9HAR2 1447 aa18.63■□□□□ 0.57
TRAPPC10-203ENST00000422875 TSTA3Q13630 321 aaPredicted RBP18.63■□□□□ 0.57
TRAPPC10-203ENST00000422875 NAB2Q15742 525 aa18.63■□□□□ 0.57
TRAPPC10-203ENST00000422875 MDH1BQ5I0G3 518 aa18.63■□□□□ 0.57
TRAPPC10-203ENST00000422875 TFRCP02786 760 aaKnown RBP18.63■□□□□ 0.57
TRAPPC10-203ENST00000422875 QARSP47897 775 aaKnown RBP18.63■□□□□ 0.57
TRAPPC10-203ENST00000422875 RCSD1Q6JBY9 416 aa18.63■□□□□ 0.57
TRAPPC10-203ENST00000422875 RHPN2Q8IUC4 686 aa18.63■□□□□ 0.57
TRAPPC10-203ENST00000422875 CCNYL1Q8N7R7 359 aa18.63■□□□□ 0.57
TRAPPC10-203ENST00000422875 ATL2Q8NHH9 583 aa18.63■□□□□ 0.57
TRAPPC10-203ENST00000422875 TMEM120BA0PK00 339 aa18.63■□□□□ 0.57
TRAPPC10-203ENST00000422875 SLC29A2Q14542 456 aa18.63■□□□□ 0.57
TRAPPC10-203ENST00000422875 PLCB4Q15147 1175 aa18.63■□□□□ 0.57
TRAPPC10-203ENST00000422875 TRAPPC11Q7Z392 1133 aa18.63■□□□□ 0.57
TRAPPC10-203ENST00000422875 FBXL13Q8NEE6 735 aa18.63■□□□□ 0.57
TRAPPC10-203ENST00000422875 MID2Q9UJV3 735 aa18.63■□□□□ 0.57
TRAPPC10-203ENST00000422875 PLAGL2Q9UPG8 496 aa18.63■□□□□ 0.57
TRAPPC10-203ENST00000422875 PGM1P36871 562 aa18.62■□□□□ 0.57
TRAPPC10-203ENST00000422875 AP2B1P63010 937 aa18.62■□□□□ 0.57
TRAPPC10-203ENST00000422875 MCPH1Q8NEM0 835 aa18.62■□□□□ 0.57
TRAPPC10-203ENST00000422875 OR6B3Q8NGW1 331 aa18.62■□□□□ 0.57
TRAPPC10-203ENST00000422875 RPS6KC1Q96S38 1066 aa18.62■□□□□ 0.57
TRAPPC10-203ENST00000422875 SUFUQ9UMX1 484 aa18.62■□□□□ 0.57
TRAPPC10-203ENST00000422875 UBE4BO95155 1302 aa18.62■□□□□ 0.57
TRAPPC10-203ENST00000422875 STMN1P16949 149 aa18.62■□□□□ 0.57
TRAPPC10-203ENST00000422875 CRKP46108 304 aa18.62■□□□□ 0.57
TRAPPC10-203ENST00000422875 PSMC1P62191 440 aaKnown RBP18.62■□□□□ 0.57
TRAPPC10-203ENST00000422875 STAT4Q14765 748 aa18.62■□□□□ 0.57
TRAPPC10-203ENST00000422875 SLC27A3Q5K4L6 730 aa18.62■□□□□ 0.57
TRAPPC10-203ENST00000422875 PPP1R18Q6NYC8 613 aa18.62■□□□□ 0.57
TRAPPC10-203ENST00000422875 SIX6OS1Q8N1H7 587 aa18.62■□□□□ 0.57
TRAPPC10-203ENST00000422875 REEP2Q9BRK0 252 aa18.62■□□□□ 0.57
TRAPPC10-203ENST00000422875 NPHS2Q9NP85 383 aa18.62■□□□□ 0.57
TRAPPC10-203ENST00000422875 RASSF10A6NK89 507 aa18.62■□□□□ 0.57
TRAPPC10-203ENST00000422875 CALB1P05937 261 aa18.62■□□□□ 0.57
TRAPPC10-203ENST00000422875 HPSEQ9Y251 543 aa18.62■□□□□ 0.57
TRAPPC10-203ENST00000422875 ANGPTL3Q9Y5C1 460 aa18.62■□□□□ 0.57
TRAPPC10-203ENST00000422875 ARHGEF40Q8TER5 1519 aa18.62■□□□□ 0.57
TRAPPC10-203ENST00000422875 ZNF699Q32M78 642 aa18.62■□□□□ 0.57
TRAPPC10-203ENST00000422875 WDR93Q6P2C0 686 aa18.62■□□□□ 0.57
TRAPPC10-203ENST00000422875 KLHL8Q9P2G9 620 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC10-203ENST00000422875 A0A087X0T9 212 aa18.61■□□□□ 0.57
TRAPPC10-203ENST00000422875 P4HBP07237 508 aaKnown RBP18.61■□□□□ 0.57
TRAPPC10-203ENST00000422875 FAM228BP0C875 321 aa18.61■□□□□ 0.57
TRAPPC10-203ENST00000422875 HSD17B3P37058 310 aa18.61■□□□□ 0.57
TRAPPC10-203ENST00000422875 KCNB2Q92953 911 aa18.61■□□□□ 0.57
TRAPPC10-203ENST00000422875 STK33Q9BYT3 514 aa18.61■□□□□ 0.57
TRAPPC10-203ENST00000422875 RAVER2Q9HCJ3 691 aaKnown RBP18.61■□□□□ 0.57
TRAPPC10-203ENST00000422875 TULP4Q9NRJ4 1543 aa18.61■□□□□ 0.57
TRAPPC10-203ENST00000422875 PFDN6O15212 129 aa18.61■□□□□ 0.57
TRAPPC10-203ENST00000422875 LDHAP00338 332 aaKnown RBP18.61■□□□□ 0.57
TRAPPC10-203ENST00000422875 USP11P51784 963 aa18.61■□□□□ 0.57
TRAPPC10-203ENST00000422875 MKRN3Q13064 507 aaKnown RBP18.61■□□□□ 0.57
TRAPPC10-203ENST00000422875 BIRC2Q13490 618 aa18.61■□□□□ 0.57
TRAPPC10-203ENST00000422875 HIF1AQ16665 826 aa18.61■□□□□ 0.57
TRAPPC10-203ENST00000422875 ISCUQ9H1K1 167 aa18.61■□□□□ 0.57
TRAPPC10-203ENST00000422875 APEX2Q9UBZ4 518 aa18.61■□□□□ 0.57
TRAPPC10-203ENST00000422875 MARCOQ9UEW3 520 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC10-203ENST00000422875 ZNF335Q9H4Z2 1342 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC10-203ENST00000422875 CCT8L1PA6NM43 557 aa18.61■□□□□ 0.57
TRAPPC10-203ENST00000422875 XPOTO43592 962 aaKnown RBP18.61■□□□□ 0.57
TRAPPC10-203ENST00000422875 SMIM5Q71RC9 77 aa18.61■□□□□ 0.57
TRAPPC10-203ENST00000422875 KAZALD1Q96I82 304 aa18.61■□□□□ 0.57
TRAPPC10-203ENST00000422875 KLF6Q99612 283 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC10-203ENST00000422875 HAUS8Q9BT25 410 aa18.61■□□□□ 0.57
TRAPPC10-203ENST00000422875 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms