RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 TCF25Q9BQ70 676 aa9.12□□□□□ -0.95
TRIM43CP-201ENST00000422468 MINDY3Q9H8M7 445 aa9.12□□□□□ -0.95
TRIM43CP-201ENST00000422468 NGRNQ9NPE2 291 aaKnown RBP9.12□□□□□ -0.95
TRIM43CP-201ENST00000422468 ENTPD7Q9NQZ7 604 aa9.12□□□□□ -0.95
TRIM43CP-201ENST00000422468 SH2B1Q9NRF2 756 aaPredicted RBP9.12□□□□□ -0.95
TRIM43CP-201ENST00000422468 ANKEF1Q9NU02 776 aa9.12□□□□□ -0.95
TRIM43CP-201ENST00000422468 FAM105AQ9NUU6 356 aa9.12□□□□□ -0.95
TRIM43CP-201ENST00000422468 RAPGEFL1Q9UHV5 662 aa9.12□□□□□ -0.95
TRIM43CP-201ENST00000422468 CARNS1A5YM72 827 aa9.11□□□□□ -0.95
TRIM43CP-201ENST00000422468 PP2D1A8MPX8 630 aa9.11□□□□□ -0.95
TRIM43CP-201ENST00000422468 SPATA31C1P0DKV0 1188 aa9.11□□□□□ -0.95
TRIM43CP-201ENST00000422468 SRGAP2BP0DMP2 458 aa9.11□□□□□ -0.95
TRIM43CP-201ENST00000422468 HOXA11P31270 313 aaPredicted RBP9.11□□□□□ -0.95
TRIM43CP-201ENST00000422468 POU5F1BQ06416 359 aa9.11□□□□□ -0.95
TRIM43CP-201ENST00000422468 KCNC3Q14003 757 aa9.11□□□□□ -0.95
TRIM43CP-201ENST00000422468 PCBP1Q15365 356 aaKnown RBP eCLIP9.11□□□□□ -0.95
TRIM43CP-201ENST00000422468 LONRF3Q496Y0 759 aa9.11□□□□□ -0.95
TRIM43CP-201ENST00000422468 NOMO2Q5JPE7 1267 aa9.11□□□□□ -0.95
TRIM43CP-201ENST00000422468 PLPP4Q5VZY2 271 aa9.11□□□□□ -0.95
TRIM43CP-201ENST00000422468 TMEM184AQ6ZMB5 413 aa9.11□□□□□ -0.95
TRIM43CP-201ENST00000422468 TMC7Q7Z402 723 aa9.11□□□□□ -0.95
TRIM43CP-201ENST00000422468 MRPL10Q7Z7H8 261 aaKnown RBP9.11□□□□□ -0.95
TRIM43CP-201ENST00000422468 RNF149Q8NC42 400 aa9.11□□□□□ -0.95
TRIM43CP-201ENST00000422468 VN1R2Q8NFZ6 395 aa9.11□□□□□ -0.95
TRIM43CP-201ENST00000422468 LPPQ93052 612 aa9.11□□□□□ -0.95
TRIM43CP-201ENST00000422468 C8orf76Q96K31 380 aa9.11□□□□□ -0.95
TRIM43CP-201ENST00000422468 LRFN3Q9BTN0 628 aa9.11□□□□□ -0.95
TRIM43CP-201ENST00000422468 C11orf16Q9NQ32 467 aa9.11□□□□□ -0.95
TRIM43CP-201ENST00000422468 BARX2Q9UMQ3 279 aaPredicted RBP9.11□□□□□ -0.95
TRIM43CP-201ENST00000422468 PCDHB2Q9Y5E7 798 aa9.11□□□□□ -0.95
TRIM43CP-201ENST00000422468 TDRD15B5MCY1 1934 aaKnown RBP9.11□□□□□ -0.95
TRIM43CP-201ENST00000422468 CNTNAP2Q9UHC6 1331 aa9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 FAM86C2PA6NEL3 165 aa9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 MEIS3P2A8K0S8 358 aa9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 HIDE1A8MVS5 230 aa9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 DCXO43602 365 aa9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 ST18O60284 1047 aa9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 ZC3H11AO75152 810 aaKnown RBP eCLIP9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 OFD1O75665 1012 aa9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 DGAT1O75907 488 aa9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 ERLIN2O94905 339 aa9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 AXLP30530 894 aa9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 MCM7P33993 719 aa9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 RARRES1P49788 294 aa9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 NUCB2P80303 420 aa9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 HMGN5P82970 282 aaKnown RBP9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 RBM10P98175 930 aaKnown RBP9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 RNASELQ05823 741 aaKnown RBP9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 NCBP1Q09161 790 aaKnown RBP9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 ORC2Q13416 577 aaPredicted RBP9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 TFDP1Q14186 410 aa9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 SMC1AQ14683 1233 aaKnown RBP9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 ZNF174Q15697 407 aa9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 UBXN11Q5T124 520 aa9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 MRPL43Q8N983 215 aaKnown RBP9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 URGCPQ8TCY9 931 aa9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 TMEM169Q96HH4 297 aa9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 CCDC43Q96MW1 224 aaKnown RBP9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 MMTAG2Q9BU76 263 aaKnown RBP9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 FOXP1Q9H334 677 aaPredicted RBP9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 NRDE2Q9H7Z3 1164 aa9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 GRPEL1Q9HAV7 217 aa9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 TUFT1Q9NNX1 390 aa9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 XPNPEP1Q9NQW7 623 aa9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 TBC1D13Q9NVG8 400 aa9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 INPP5FQ9Y2H2 1132 aa9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 USP15Q9Y4E8 981 aaPredicted RBP9.1□□□□□ -0.95
TRIM43CP-201ENST00000422468 C2orf71A6NGG8 1288 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 LOC730098B7Z3J9 87 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 NT5C1B-RDH14C9J2C7 533 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 TSPAN1O60635 241 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 MED24O75448 989 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 GALTP07902 379 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 PDIA4P13667 645 aaKnown RBP9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 NCLP19338 710 aaKnown RBP9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 ATP2B1P20020 1258 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 ARL2P36404 184 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 TECP42680 631 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 PTENP60484 403 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 RESTQ13127 1097 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 CAPSQ13938 189 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 BMS1Q14692 1282 aaKnown RBP9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 ANKRD54Q6NXT1 300 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 LLGL2Q6P1M3 1020 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 NOTUMQ6P988 496 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 AGMOQ6ZNB7 445 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 KCNK18Q7Z418 384 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 DDX53Q86TM3 631 aaKnown RBP9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 CATSPER3Q86XQ3 398 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 NOSTRINQ8IVI9 506 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 FAM184AQ8NB25 1140 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 CNNM3Q8NE01 707 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 PIGOQ8TEQ8 1089 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 ZDHHC16Q969W1 377 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 CCDC51Q96ER9 411 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 IGSF21Q96ID5 467 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 POLR3CQ9BUI4 534 aaPredicted RBP9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 NFKBIZQ9BYH8 718 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 UBN1Q9NPG3 1134 aa9.09□□□□□ -0.95
TRIM43CP-201ENST00000422468 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms