RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 TSPYL2Q9H2G4 693 aaPredicted RBP19.23■□□□□ 0.67
LINC00271-201ENST00000421378 PDZD7Q9H5P4 517 aa19.23■□□□□ 0.67
LINC00271-201ENST00000421378 ANKFY1Q9P2R3 1169 aa19.23■□□□□ 0.67
LINC00271-201ENST00000421378 TNFSF13BQ9Y275 285 aa19.23■□□□□ 0.67
LINC00271-201ENST00000421378 ZMYM2Q9UBW7 1377 aa19.22■□□□□ 0.67
LINC00271-201ENST00000421378 ABHD14A-ACY1A0A1B0GW23 586 aa19.22■□□□□ 0.67
LINC00271-201ENST00000421378 TOM1L1O75674 476 aa19.22■□□□□ 0.67
LINC00271-201ENST00000421378 BAIAP3O94812 1187 aa19.22■□□□□ 0.67
LINC00271-201ENST00000421378 FGBP02675 491 aa19.22■□□□□ 0.67
LINC00271-201ENST00000421378 HOXD13P35453 343 aa19.22■□□□□ 0.67
LINC00271-201ENST00000421378 DSC3Q14574 896 aa19.22■□□□□ 0.67
LINC00271-201ENST00000421378 KNOP1Q1ED39 458 aaKnown RBP19.22■□□□□ 0.67
LINC00271-201ENST00000421378 COBLL1Q53SF7 1204 aa19.22■□□□□ 0.67
LINC00271-201ENST00000421378 SLC27A1Q6PCB7 646 aa19.22■□□□□ 0.67
LINC00271-201ENST00000421378 ZNF365Q70YC5 407 aa19.22■□□□□ 0.67
LINC00271-201ENST00000421378 OTOP2Q7RTS6 562 aa19.22■□□□□ 0.67
LINC00271-201ENST00000421378 LINC01599Q8WXQ3 324 aa19.22■□□□□ 0.67
LINC00271-201ENST00000421378 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.22■□□□□ 0.67
LINC00271-201ENST00000421378 ADPGKQ9BRR6 497 aa19.22■□□□□ 0.67
LINC00271-201ENST00000421378 GBP3Q9H0R5 595 aa19.22■□□□□ 0.67
LINC00271-201ENST00000421378 PDE4DIPQ5VU43 2346 aa19.22■□□□□ 0.67
LINC00271-201ENST00000421378 MICAL3Q7RTP6 2002 aa19.22■□□□□ 0.67
LINC00271-201ENST00000421378 EFCAB14O75071 495 aa19.21■□□□□ 0.67
LINC00271-201ENST00000421378 PRCPP42785 496 aa19.21■□□□□ 0.67
LINC00271-201ENST00000421378 STIM1Q13586 685 aa19.21■□□□□ 0.67
LINC00271-201ENST00000421378 ZNF568Q3ZCX4 644 aa19.21■□□□□ 0.67
LINC00271-201ENST00000421378 TMEM240Q5SV17 173 aa19.21■□□□□ 0.67
LINC00271-201ENST00000421378 TCHPQ9BT92 498 aa19.21■□□□□ 0.67
LINC00271-201ENST00000421378 TRAIPQ9BWF2 469 aa19.21■□□□□ 0.67
LINC00271-201ENST00000421378 TRIM6Q9C030 488 aaPredicted RBP19.21■□□□□ 0.67
LINC00271-201ENST00000421378 IKZF4Q9H2S9 585 aa19.21■□□□□ 0.67
LINC00271-201ENST00000421378 RGS18Q9NS28 235 aa19.21■□□□□ 0.67
LINC00271-201ENST00000421378 CLDN3O15551 220 aa19.2■□□□□ 0.66
LINC00271-201ENST00000421378 PROZP22891 400 aa19.2■□□□□ 0.66
LINC00271-201ENST00000421378 PPP1R2P41236 205 aa19.2■□□□□ 0.66
LINC00271-201ENST00000421378 EEF1DP3Q658K8 133 aa19.2■□□□□ 0.66
LINC00271-201ENST00000421378 SLC39A4Q6P5W5 647 aa19.2■□□□□ 0.66
LINC00271-201ENST00000421378 MPZL3Q6UWV2 235 aa19.2■□□□□ 0.66
LINC00271-201ENST00000421378 SLC24A5Q71RS6 500 aa19.2■□□□□ 0.66
LINC00271-201ENST00000421378 HS2ST1Q7LGA3 356 aa19.2■□□□□ 0.66
LINC00271-201ENST00000421378 APBB1IPQ7Z5R6 666 aaPredicted RBP19.2■□□□□ 0.66
LINC00271-201ENST00000421378 PTPRHQ9HD43 1115 aa19.2■□□□□ 0.66
LINC00271-201ENST00000421378 C1orf112Q9NSG2 853 aa19.2■□□□□ 0.66
LINC00271-201ENST00000421378 FAM105AQ9NUU6 356 aa19.2■□□□□ 0.66
LINC00271-201ENST00000421378 RANBP2P49792 3224 aaKnown RBP19.2■□□□□ 0.66
LINC00271-201ENST00000421378 TISP43B9A030 160 aa19.19■□□□□ 0.66
LINC00271-201ENST00000421378 LETM1O95202 739 aaPredicted RBP19.19■□□□□ 0.66
LINC00271-201ENST00000421378 MATR3P43243 847 aaKnown RBP eCLIP19.19■□□□□ 0.66
LINC00271-201ENST00000421378 RAB27AP51159 221 aa19.19■□□□□ 0.66
LINC00271-201ENST00000421378 NOLC1Q14978 699 aaKnown RBP eCLIP19.19■□□□□ 0.66
LINC00271-201ENST00000421378 DCAF4L1Q3SXM0 396 aa19.19■□□□□ 0.66
LINC00271-201ENST00000421378 SASS6Q6UVJ0 657 aa19.19■□□□□ 0.66
LINC00271-201ENST00000421378 RTN4RL1Q86UN2 441 aaPredicted RBP19.19■□□□□ 0.66
LINC00271-201ENST00000421378 ADSSL1Q8N142 457 aa19.19■□□□□ 0.66
LINC00271-201ENST00000421378 GDF15Q99988 308 aa19.19■□□□□ 0.66
LINC00271-201ENST00000421378 EIF2AQ9BY44 585 aaKnown RBP19.19■□□□□ 0.66
LINC00271-201ENST00000421378 A0A0U1RQF3 1178 aa19.19■□□□□ 0.66
LINC00271-201ENST00000421378 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.19■□□□□ 0.66
LINC00271-201ENST00000421378 ZBBXA8MT70 800 aa19.19■□□□□ 0.66
LINC00271-201ENST00000421378 ANKRD63C9JTQ0 380 aa19.19■□□□□ 0.66
LINC00271-201ENST00000421378 ENPP3O14638 875 aa19.19■□□□□ 0.66
LINC00271-201ENST00000421378 ABLIM1O14639 778 aa19.19■□□□□ 0.66
LINC00271-201ENST00000421378 PSMA7O14818 248 aa19.19■□□□□ 0.66
LINC00271-201ENST00000421378 TGFB1I1O43294 461 aa19.19■□□□□ 0.66
LINC00271-201ENST00000421378 NPTXRO95502 500 aa19.19■□□□□ 0.66
LINC00271-201ENST00000421378 MCL1Q07820 350 aa19.19■□□□□ 0.66
LINC00271-201ENST00000421378 UBXN11Q5T124 520 aa19.19■□□□□ 0.66
LINC00271-201ENST00000421378 SLFN12LQ6IEE8 588 aa19.19■□□□□ 0.66
LINC00271-201ENST00000421378 ZBTB33Q86T24 672 aa19.19■□□□□ 0.66
LINC00271-201ENST00000421378 ZBTB45Q96K62 511 aaPredicted RBP19.19■□□□□ 0.66
LINC00271-201ENST00000421378 UBE2OQ9C0C9 1292 aaKnown RBP19.19■□□□□ 0.66
LINC00271-201ENST00000421378 CDT1Q9H211 546 aa19.19■□□□□ 0.66
LINC00271-201ENST00000421378 MTIF3Q9H2K0 278 aaKnown RBP19.19■□□□□ 0.66
LINC00271-201ENST00000421378 KCTD10Q9H3F6 313 aa19.19■□□□□ 0.66
LINC00271-201ENST00000421378 TYW1Q9NV66 732 aaKnown RBP19.19■□□□□ 0.66
LINC00271-201ENST00000421378 PCDHB2Q9Y5E7 798 aa19.19■□□□□ 0.66
LINC00271-201ENST00000421378 C9IYK1 514 aa19.18■□□□□ 0.66
LINC00271-201ENST00000421378 HARSP12081 509 aaKnown RBP19.18■□□□□ 0.66
LINC00271-201ENST00000421378 SKIP12755 728 aa19.18■□□□□ 0.66
LINC00271-201ENST00000421378 CD44P16070 742 aaKnown RBP19.18■□□□□ 0.66
LINC00271-201ENST00000421378 ADSSP30520 456 aa19.18■□□□□ 0.66
LINC00271-201ENST00000421378 KCNJ6P48051 423 aa19.18■□□□□ 0.66
LINC00271-201ENST00000421378 NLRP12P59046 1061 aa19.18■□□□□ 0.66
LINC00271-201ENST00000421378 WDR5P61964 334 aaKnown RBP19.18■□□□□ 0.66
LINC00271-201ENST00000421378 SNRPFP62306 86 aaKnown RBP19.18■□□□□ 0.66
LINC00271-201ENST00000421378 DPCR1Q3MIW9 517 aa19.18■□□□□ 0.66
LINC00271-201ENST00000421378 MLKLQ8NB16 471 aa19.18■□□□□ 0.66
LINC00271-201ENST00000421378 GOLGA5Q8TBA6 731 aa19.18■□□□□ 0.66
LINC00271-201ENST00000421378 POMGNT1Q8WZA1 660 aa19.18■□□□□ 0.66
LINC00271-201ENST00000421378 HERVK_113Q902F9 699 aa19.18■□□□□ 0.66
LINC00271-201ENST00000421378 AGPAT3Q9NRZ7 376 aa19.18■□□□□ 0.66
LINC00271-201ENST00000421378 STYXL1Q9Y6J8 313 aa19.18■□□□□ 0.66
LINC00271-201ENST00000421378 LAMA2P24043 3122 aaKnown RBP19.17■□□□□ 0.66
LINC00271-201ENST00000421378 A0A0B4J269 797 aa19.17■□□□□ 0.66
LINC00271-201ENST00000421378 SYCE3A1L190 88 aa19.17■□□□□ 0.66
LINC00271-201ENST00000421378 PPP1R3GB7ZBB8 358 aa19.17■□□□□ 0.66
LINC00271-201ENST00000421378 PDXKO00764 312 aa19.17■□□□□ 0.66
LINC00271-201ENST00000421378 MCF2P10911 925 aa19.17■□□□□ 0.66
LINC00271-201ENST00000421378 IBSPP21815 317 aaPredicted RBP19.17■□□□□ 0.66
LINC00271-201ENST00000421378 ZSCAN23Q3MJ62 389 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms