RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 MCCD1P59942 119 aaPredicted RBP23.55■■□□□ 1.36
ABCF3-202ENST00000421340 KCNJ12Q14500 433 aa23.55■■□□□ 1.36
ABCF3-202ENST00000421340 FRMD5Q7Z6J6 570 aa23.55■■□□□ 1.36
ABCF3-202ENST00000421340 XXYLT1Q8NBI6 393 aa23.55■■□□□ 1.36
ABCF3-202ENST00000421340 CAGE1Q8TC20 777 aa23.55■■□□□ 1.36
ABCF3-202ENST00000421340 PPP1R16BQ96T49 567 aa23.55■■□□□ 1.36
ABCF3-202ENST00000421340 OSMRQ99650 979 aa23.55■■□□□ 1.36
ABCF3-202ENST00000421340 METTL14Q9HCE5 456 aaKnown RBP23.55■■□□□ 1.36
ABCF3-202ENST00000421340 PTPRHQ9HD43 1115 aa23.55■■□□□ 1.36
ABCF3-202ENST00000421340 HSPBP1Q9NZL4 362 aa23.55■■□□□ 1.36
ABCF3-202ENST00000421340 FRMD4BQ9Y2L6 1034 aa23.55■■□□□ 1.36
ABCF3-202ENST00000421340 CDY2AQ9Y6F7 541 aa23.55■■□□□ 1.36
ABCF3-202ENST00000421340 A0A0B4J269 797 aa23.54■■□□□ 1.36
ABCF3-202ENST00000421340 ERLIN2O94905 339 aa23.54■■□□□ 1.36
ABCF3-202ENST00000421340 LDHAP00338 332 aaKnown RBP23.54■■□□□ 1.36
ABCF3-202ENST00000421340 CHRNA1P02708 482 aa23.54■■□□□ 1.36
ABCF3-202ENST00000421340 EDN1P05305 212 aa23.54■■□□□ 1.36
ABCF3-202ENST00000421340 ATP1A3P13637 1013 aa23.54■■□□□ 1.36
ABCF3-202ENST00000421340 ATF7IP2Q5U623 682 aa23.54■■□□□ 1.36
ABCF3-202ENST00000421340 FAM43BQ6ZT52 329 aaPredicted RBP23.54■■□□□ 1.36
ABCF3-202ENST00000421340 CCDC155Q8N6L0 562 aa23.54■■□□□ 1.36
ABCF3-202ENST00000421340 POMGNT1Q8WZA1 660 aa23.54■■□□□ 1.36
ABCF3-202ENST00000421340 FBXL18Q96ME1 805 aa23.54■■□□□ 1.36
ABCF3-202ENST00000421340 CBWD1Q9BRT8 395 aa23.54■■□□□ 1.36
ABCF3-202ENST00000421340 C11orf49Q9H6J7 331 aa23.54■■□□□ 1.36
ABCF3-202ENST00000421340 A0A1B0GUA9 196 aa23.53■■□□□ 1.36
ABCF3-202ENST00000421340 TISP43B9A030 160 aa23.53■■□□□ 1.36
ABCF3-202ENST00000421340 CLDN3O15551 220 aa23.53■■□□□ 1.36
ABCF3-202ENST00000421340 TSPAN1O60635 241 aa23.53■■□□□ 1.36
ABCF3-202ENST00000421340 EXOC3O60645 756 aa23.53■■□□□ 1.36
ABCF3-202ENST00000421340 PRKCSHP14314 528 aaPredicted RBP23.53■■□□□ 1.36
ABCF3-202ENST00000421340 FANCCQ00597 558 aa23.53■■□□□ 1.36
ABCF3-202ENST00000421340 ENPEPQ07075 957 aa23.53■■□□□ 1.36
ABCF3-202ENST00000421340 MCL1Q07820 350 aa23.53■■□□□ 1.36
ABCF3-202ENST00000421340 USP38Q8NB14 1042 aa23.53■■□□□ 1.36
ABCF3-202ENST00000421340 CNOT6LQ96LI5 555 aaKnown RBP23.53■■□□□ 1.36
ABCF3-202ENST00000421340 GINS2Q9Y248 185 aa23.53■■□□□ 1.36
ABCF3-202ENST00000421340 EVPLQ92817 2033 aa23.53■■□□□ 1.36
ABCF3-202ENST00000421340 SIP14410 1827 aa23.52■■□□□ 1.36
ABCF3-202ENST00000421340 ABLIM1O14639 778 aa23.52■■□□□ 1.36
ABCF3-202ENST00000421340 AKAP3O75969 853 aa23.52■■□□□ 1.36
ABCF3-202ENST00000421340 EPB41P11171 864 aaKnown RBP23.52■■□□□ 1.36
ABCF3-202ENST00000421340 CYP2J2P51589 502 aa23.52■■□□□ 1.36
ABCF3-202ENST00000421340 BFSP2Q13515 415 aa23.52■■□□□ 1.36
ABCF3-202ENST00000421340 MPZL3Q6UWV2 235 aa23.52■■□□□ 1.36
ABCF3-202ENST00000421340 CATSPER4Q7RTX7 472 aa23.52■■□□□ 1.36
ABCF3-202ENST00000421340 APTXQ7Z2E3 356 aaKnown RBP23.52■■□□□ 1.36
ABCF3-202ENST00000421340 TMEM40Q8WWA1 233 aa23.52■■□□□ 1.36
ABCF3-202ENST00000421340 BORCS6Q96GS4 357 aa23.52■■□□□ 1.36
ABCF3-202ENST00000421340 AGO2Q9UKV8 859 aaKnown RBP23.52■■□□□ 1.36
ABCF3-202ENST00000421340 TTLL13PA6NNM8 815 aa23.51■■□□□ 1.35
ABCF3-202ENST00000421340 DCDC2CA8MYV0 355 aa23.51■■□□□ 1.35
ABCF3-202ENST00000421340 N4BP3O15049 544 aa23.51■■□□□ 1.35
ABCF3-202ENST00000421340 B4GALT5O43286 388 aa23.51■■□□□ 1.35
ABCF3-202ENST00000421340 EXTL3O43909 919 aa23.51■■□□□ 1.35
ABCF3-202ENST00000421340 CSDE1O75534 798 aaKnown RBP23.51■■□□□ 1.35
ABCF3-202ENST00000421340 SERPINC1P01008 464 aa23.51■■□□□ 1.35
ABCF3-202ENST00000421340 CKBP12277 381 aa23.51■■□□□ 1.35
ABCF3-202ENST00000421340 ARF4P18085 180 aaPredicted RBP23.51■■□□□ 1.35
ABCF3-202ENST00000421340 HOXA11P31270 313 aaPredicted RBP23.51■■□□□ 1.35
ABCF3-202ENST00000421340 POU5F1Q01860 360 aaKnown RBP23.51■■□□□ 1.35
ABCF3-202ENST00000421340 PPP2R3AQ06190 1150 aa23.51■■□□□ 1.35
ABCF3-202ENST00000421340 KRT31Q15323 416 aa23.51■■□□□ 1.35
ABCF3-202ENST00000421340 KYAT1Q16773 422 aa23.51■■□□□ 1.35
ABCF3-202ENST00000421340 CCDC40Q4G0X9 1142 aa23.51■■□□□ 1.35
ABCF3-202ENST00000421340 CEP135Q66GS9 1140 aa23.51■■□□□ 1.35
ABCF3-202ENST00000421340 APBB1IPQ7Z5R6 666 aaPredicted RBP23.51■■□□□ 1.35
ABCF3-202ENST00000421340 NECAB2Q7Z6G3 386 aa23.51■■□□□ 1.35
ABCF3-202ENST00000421340 GPD1LQ8N335 351 aa23.51■■□□□ 1.35
ABCF3-202ENST00000421340 EEF2KMTQ96G04 330 aa23.51■■□□□ 1.35
ABCF3-202ENST00000421340 PCIF1Q9H4Z3 704 aa23.51■■□□□ 1.35
ABCF3-202ENST00000421340 ARMCX3Q9UH62 379 aaPredicted RBP23.51■■□□□ 1.35
ABCF3-202ENST00000421340 PITPNM1O00562 1244 aa23.5■■□□□ 1.35
ABCF3-202ENST00000421340 GPR182O15218 404 aa23.5■■□□□ 1.35
ABCF3-202ENST00000421340 AP5Z1O43299 807 aa23.5■■□□□ 1.35
ABCF3-202ENST00000421340 CBFA2T2O43439 604 aa23.5■■□□□ 1.35
ABCF3-202ENST00000421340 TPM2P07951 284 aa23.5■■□□□ 1.35
ABCF3-202ENST00000421340 MCF2P10911 925 aa23.5■■□□□ 1.35
ABCF3-202ENST00000421340 CASP4P49662 377 aa23.5■■□□□ 1.35
ABCF3-202ENST00000421340 HSP90AA4PQ58FG1 418 aa23.5■■□□□ 1.35
ABCF3-202ENST00000421340 ZNF618Q5T7W0 954 aa23.5■■□□□ 1.35
ABCF3-202ENST00000421340 TRIM59Q8IWR1 403 aa23.5■■□□□ 1.35
ABCF3-202ENST00000421340 FAM186BQ8IYM0 893 aa23.5■■□□□ 1.35
ABCF3-202ENST00000421340 DIS3LQ8TF46 1054 aaKnown RBP23.5■■□□□ 1.35
ABCF3-202ENST00000421340 CCDC51Q96ER9 411 aa23.5■■□□□ 1.35
ABCF3-202ENST00000421340 PAWRQ96IZ0 340 aaKnown RBP23.5■■□□□ 1.35
ABCF3-202ENST00000421340 ZBTB45Q96K62 511 aaPredicted RBP23.5■■□□□ 1.35
ABCF3-202ENST00000421340 TUBGCP2Q9BSJ2 902 aa23.5■■□□□ 1.35
ABCF3-202ENST00000421340 TCHPQ9BT92 498 aa23.5■■□□□ 1.35
ABCF3-202ENST00000421340 CHST12Q9NRB3 414 aa23.5■■□□□ 1.35
ABCF3-202ENST00000421340 AGPAT5Q9NUQ2 364 aa23.5■■□□□ 1.35
ABCF3-202ENST00000421340 USP20Q9Y2K6 914 aa23.5■■□□□ 1.35
ABCF3-202ENST00000421340 NOC2LQ9Y3T9 749 aaKnown RBP23.5■■□□□ 1.35
ABCF3-202ENST00000421340 RPS6KA5O75582 802 aa23.49■■□□□ 1.35
ABCF3-202ENST00000421340 MTIF2P46199 727 aaKnown RBP23.49■■□□□ 1.35
ABCF3-202ENST00000421340 COPB1P53618 953 aaKnown RBP23.49■■□□□ 1.35
ABCF3-202ENST00000421340 UBASH3AP57075 661 aa23.49■■□□□ 1.35
ABCF3-202ENST00000421340 TMEM132AQ24JP5 1023 aa23.49■■□□□ 1.35
ABCF3-202ENST00000421340 FILIP1LQ4L180 1135 aa23.49■■□□□ 1.35
ABCF3-202ENST00000421340 FBXO47Q5MNV8 452 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms