RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 CNTNAP2Q9UHC6 1331 aa12.26□□□□□ -0.45
SSBP3-206ENST00000420121 MTCL1Q9Y4B5 1905 aaKnown RBP12.25□□□□□ -0.45
SSBP3-206ENST00000420121 FSD2A1L4K1 749 aa12.25□□□□□ -0.45
SSBP3-206ENST00000420121 TTLL13PA6NNM8 815 aa12.25□□□□□ -0.45
SSBP3-206ENST00000420121 LOC730098B7Z3J9 87 aa12.25□□□□□ -0.45
SSBP3-206ENST00000420121 DCXO43602 365 aa12.25□□□□□ -0.45
SSBP3-206ENST00000420121 CLASP2O75122 1294 aaKnown RBP12.25□□□□□ -0.45
SSBP3-206ENST00000420121 ERLIN2O94905 339 aa12.25□□□□□ -0.45
SSBP3-206ENST00000420121 EFEMP2O95967 443 aa12.25□□□□□ -0.45
SSBP3-206ENST00000420121 EDN1P05305 212 aa12.25□□□□□ -0.45
SSBP3-206ENST00000420121 CTSAP10619 480 aa12.25□□□□□ -0.45
SSBP3-206ENST00000420121 DSC1Q08554 894 aa12.25□□□□□ -0.45
SSBP3-206ENST00000420121 CBX2Q14781 532 aaPredicted RBP12.25□□□□□ -0.45
SSBP3-206ENST00000420121 LLGL2Q6P1M3 1020 aa12.25□□□□□ -0.45
SSBP3-206ENST00000420121 NOTUMQ6P988 496 aa12.25□□□□□ -0.45
SSBP3-206ENST00000420121 MAEAQ7L5Y9 396 aa12.25□□□□□ -0.45
SSBP3-206ENST00000420121 CDR2LQ86X02 465 aaPredicted RBP12.25□□□□□ -0.45
SSBP3-206ENST00000420121 VPS52Q8N1B4 723 aa12.25□□□□□ -0.45
SSBP3-206ENST00000420121 IGSF22Q8N9C0 903 aa12.25□□□□□ -0.45
SSBP3-206ENST00000420121 CNNM3Q8NE01 707 aa12.25□□□□□ -0.45
SSBP3-206ENST00000420121 GSTCDQ8NEC7 633 aa12.25□□□□□ -0.45
SSBP3-206ENST00000420121 FEZF2Q8TBJ5 459 aa12.25□□□□□ -0.45
SSBP3-206ENST00000420121 TMX3Q96JJ7 454 aa12.25□□□□□ -0.45
SSBP3-206ENST00000420121 NACC1Q96RE7 527 aa12.25□□□□□ -0.45
SSBP3-206ENST00000420121 GBP3Q9H0R5 595 aa12.25□□□□□ -0.45
SSBP3-206ENST00000420121 NXF3Q9H4D5 531 aaKnown RBP12.25□□□□□ -0.45
SSBP3-206ENST00000420121 MARCH5Q9NX47 278 aa12.25□□□□□ -0.45
SSBP3-206ENST00000420121 HCFC2Q9Y5Z7 792 aa12.25□□□□□ -0.45
SSBP3-206ENST00000420121 MYO10Q9HD67 2058 aa12.25□□□□□ -0.45
SSBP3-206ENST00000420121 A0A1B0GUA9 196 aa12.24□□□□□ -0.45
SSBP3-206ENST00000420121 ARL5CA6NH57 179 aa12.24□□□□□ -0.45
SSBP3-206ENST00000420121 LILRB3O75022 631 aa12.24□□□□□ -0.45
SSBP3-206ENST00000420121 CXCL14O95715 111 aa12.24□□□□□ -0.45
SSBP3-206ENST00000420121 POMCP01189 267 aa12.24□□□□□ -0.45
SSBP3-206ENST00000420121 ITGA4P13612 1032 aa12.24□□□□□ -0.45
SSBP3-206ENST00000420121 CYP11B2P19099 503 aa12.24□□□□□ -0.45
SSBP3-206ENST00000420121 MUTP22033 750 aa12.24□□□□□ -0.45
SSBP3-206ENST00000420121 MLH1P40692 756 aa12.24□□□□□ -0.45
SSBP3-206ENST00000420121 RNASELQ05823 741 aaKnown RBP12.24□□□□□ -0.45
SSBP3-206ENST00000420121 PTGDRQ13258 359 aa12.24□□□□□ -0.45
SSBP3-206ENST00000420121 PTPN14Q15678 1187 aa12.24□□□□□ -0.45
SSBP3-206ENST00000420121 HERC4Q5GLZ8 1057 aaPredicted RBP12.24□□□□□ -0.45
SSBP3-206ENST00000420121 PADI6Q6TGC4 694 aa12.24□□□□□ -0.45
SSBP3-206ENST00000420121 RNF135Q8IUD6 432 aa12.24□□□□□ -0.45
SSBP3-206ENST00000420121 COLGALT2Q8IYK4 626 aa12.24□□□□□ -0.45
SSBP3-206ENST00000420121 RNF168Q8IYW5 571 aaPredicted RBP12.24□□□□□ -0.45
SSBP3-206ENST00000420121 MCPH1Q8NEM0 835 aa12.24□□□□□ -0.45
SSBP3-206ENST00000420121 URGCPQ8TCY9 931 aa12.24□□□□□ -0.45
SSBP3-206ENST00000420121 ZFP42Q96MM3 310 aa12.24□□□□□ -0.45
SSBP3-206ENST00000420121 CCDC43Q96MW1 224 aaKnown RBP12.24□□□□□ -0.45
SSBP3-206ENST00000420121 GAD1Q99259 594 aa12.24□□□□□ -0.45
SSBP3-206ENST00000420121 POP1Q99575 1024 aaKnown RBP12.24□□□□□ -0.45
SSBP3-206ENST00000420121 TMEM175Q9BSA9 504 aa12.24□□□□□ -0.45
SSBP3-206ENST00000420121 CCDC113Q9H0I3 377 aa12.24□□□□□ -0.45
SSBP3-206ENST00000420121 FZD8Q9H461 694 aa12.24□□□□□ -0.45
SSBP3-206ENST00000420121 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.24□□□□□ -0.45
SSBP3-206ENST00000420121 VWA8A3KMH1 1905 aa12.23□□□□□ -0.45
SSBP3-206ENST00000420121 CARNS1A5YM72 827 aa12.23□□□□□ -0.45
SSBP3-206ENST00000420121 LRRIQ4A6NIV6 560 aa12.23□□□□□ -0.45
SSBP3-206ENST00000420121 PP2D1A8MPX8 630 aa12.23□□□□□ -0.45
SSBP3-206ENST00000420121 F8W810 466 aa12.23□□□□□ -0.45
SSBP3-206ENST00000420121 NRP1O14786 923 aa12.23□□□□□ -0.45
SSBP3-206ENST00000420121 ALADP13716 330 aa12.23□□□□□ -0.45
SSBP3-206ENST00000420121 SCNN1GP51170 649 aa12.23□□□□□ -0.45
SSBP3-206ENST00000420121 FAM187BQ17R55 369 aa12.23□□□□□ -0.45
SSBP3-206ENST00000420121 ERMNQ8TAM6 284 aa12.23□□□□□ -0.45
SSBP3-206ENST00000420121 SLC22A17Q8WUG5 538 aa12.23□□□□□ -0.45
SSBP3-206ENST00000420121 TBC1D32Q96NH3 1257 aa12.23□□□□□ -0.45
SSBP3-206ENST00000420121 MMTAG2Q9BU76 263 aaKnown RBP12.23□□□□□ -0.45
SSBP3-206ENST00000420121 APOL5Q9BWW9 433 aa12.23□□□□□ -0.45
SSBP3-206ENST00000420121 PHF7Q9BWX1 381 aaPredicted RBP12.23□□□□□ -0.45
SSBP3-206ENST00000420121 POLD4Q9HCU8 107 aa12.23□□□□□ -0.45
SSBP3-206ENST00000420121 UBN1Q9NPG3 1134 aa12.23□□□□□ -0.45
SSBP3-206ENST00000420121 KANSL3Q9P2N6 904 aa12.23□□□□□ -0.45
SSBP3-206ENST00000420121 LRWD1Q9UFC0 647 aa12.23□□□□□ -0.45
SSBP3-206ENST00000420121 MUTYHQ9UIF7 546 aa12.23□□□□□ -0.45
SSBP3-206ENST00000420121 NOL7Q9UMY1 257 aaKnown RBP12.23□□□□□ -0.45
SSBP3-206ENST00000420121 USP20Q9Y2K6 914 aa12.23□□□□□ -0.45
SSBP3-206ENST00000420121 MUC6Q6W4X9 2439 aa12.23□□□□□ -0.45
SSBP3-206ENST00000420121 ZMYM2Q9UBW7 1377 aa12.22□□□□□ -0.45
SSBP3-206ENST00000420121 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.22□□□□□ -0.45
SSBP3-206ENST00000420121 ARHGEF35A5YM69 484 aa12.22□□□□□ -0.45
SSBP3-206ENST00000420121 PRR33A8MZF0 331 aa12.22□□□□□ -0.45
SSBP3-206ENST00000420121 ST18O60284 1047 aa12.22□□□□□ -0.45
SSBP3-206ENST00000420121 NPTXRO95502 500 aa12.22□□□□□ -0.45
SSBP3-206ENST00000420121 EPCAMP16422 314 aa12.22□□□□□ -0.45
SSBP3-206ENST00000420121 HOXB8P17481 243 aaPredicted RBP12.22□□□□□ -0.45
SSBP3-206ENST00000420121 AKAP5P24588 427 aa12.22□□□□□ -0.45
SSBP3-206ENST00000420121 CCT6AP40227 531 aaKnown RBP12.22□□□□□ -0.45
SSBP3-206ENST00000420121 GNL2Q13823 731 aaKnown RBP12.22□□□□□ -0.45
SSBP3-206ENST00000420121 PDIA5Q14554 519 aa12.22□□□□□ -0.45
SSBP3-206ENST00000420121 HAUS3Q68CZ6 603 aa12.22□□□□□ -0.45
SSBP3-206ENST00000420121 SLC27A1Q6PCB7 646 aa12.22□□□□□ -0.45
SSBP3-206ENST00000420121 TAS1R1Q7RTX1 841 aa12.22□□□□□ -0.45
SSBP3-206ENST00000420121 KCNK18Q7Z418 384 aa12.22□□□□□ -0.45
SSBP3-206ENST00000420121 CASP10Q92851 521 aa12.22□□□□□ -0.45
SSBP3-206ENST00000420121 PRIMPOLQ96LW4 560 aa12.22□□□□□ -0.45
SSBP3-206ENST00000420121 CXCL16Q9H2A7 254 aa12.22□□□□□ -0.45
SSBP3-206ENST00000420121 BHMT2Q9H2M3 363 aa12.22□□□□□ -0.45
SSBP3-206ENST00000420121 PDZD7Q9H5P4 517 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms