RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 MASP2O00187 686 aa4.55□□□□□ -1.68
SDCBPP3-201ENST00000419629 B3GALT2O43825 422 aa4.55□□□□□ -1.68
SDCBPP3-201ENST00000419629 BRINP1O60477 761 aa4.55□□□□□ -1.68
SDCBPP3-201ENST00000419629 PTX3P26022 381 aaPredicted RBP4.55□□□□□ -1.68
SDCBPP3-201ENST00000419629 CANXP27824 592 aaKnown RBP4.55□□□□□ -1.68
SDCBPP3-201ENST00000419629 PTTG1IPP53801 180 aa4.55□□□□□ -1.68
SDCBPP3-201ENST00000419629 C21orf58P58505 322 aa4.55□□□□□ -1.68
SDCBPP3-201ENST00000419629 SEPT7Q16181 437 aaKnown RBP4.55□□□□□ -1.68
SDCBPP3-201ENST00000419629 CSRP2Q16527 193 aa4.55□□□□□ -1.68
SDCBPP3-201ENST00000419629 ATP13A4Q4VNC1 1196 aa4.55□□□□□ -1.68
SDCBPP3-201ENST00000419629 TIGD2Q4W5G0 525 aa4.55□□□□□ -1.68
SDCBPP3-201ENST00000419629 DCAF17Q5H9S7 520 aaPredicted RBP4.55□□□□□ -1.68
SDCBPP3-201ENST00000419629 COLEC12Q5KU26 742 aa4.55□□□□□ -1.68
SDCBPP3-201ENST00000419629 OLFML1Q6UWY5 402 aa4.55□□□□□ -1.68
SDCBPP3-201ENST00000419629 KRT26Q7Z3Y9 468 aa4.55□□□□□ -1.68
SDCBPP3-201ENST00000419629 APBB1IPQ7Z5R6 666 aaPredicted RBP4.55□□□□□ -1.68
SDCBPP3-201ENST00000419629 CPT1CQ8TCG5 803 aa4.55□□□□□ -1.68
SDCBPP3-201ENST00000419629 C14orf93Q9H972 538 aaKnown RBP4.55□□□□□ -1.68
SDCBPP3-201ENST00000419629 KCNG1Q9UIX4 513 aa4.55□□□□□ -1.68
SDCBPP3-201ENST00000419629 APOBEC2Q9Y235 224 aaKnown RBP4.55□□□□□ -1.68
SDCBPP3-201ENST00000419629 ST20-MTHFSA0A0A6YYL1 179 aa4.54□□□□□ -1.68
SDCBPP3-201ENST00000419629 MTSS1O43312 755 aa4.54□□□□□ -1.68
SDCBPP3-201ENST00000419629 DNAJC6O75061 913 aa4.54□□□□□ -1.68
SDCBPP3-201ENST00000419629 ULK1O75385 1050 aa4.54□□□□□ -1.68
SDCBPP3-201ENST00000419629 APOL3O95236 402 aa4.54□□□□□ -1.68
SDCBPP3-201ENST00000419629 GYPEP15421 78 aa4.54□□□□□ -1.68
SDCBPP3-201ENST00000419629 ATXN1P54253 815 aaKnown RBP4.54□□□□□ -1.68
SDCBPP3-201ENST00000419629 PHC1P78364 1004 aa4.54□□□□□ -1.68
SDCBPP3-201ENST00000419629 ADCY2Q08462 1091 aa4.54□□□□□ -1.68
SDCBPP3-201ENST00000419629 MYBPC3Q14896 1274 aa4.54□□□□□ -1.68
SDCBPP3-201ENST00000419629 DDB1Q16531 1140 aa4.54□□□□□ -1.68
SDCBPP3-201ENST00000419629 HECTD2Q5U5R9 776 aa4.54□□□□□ -1.68
SDCBPP3-201ENST00000419629 CREB3L3Q68CJ9 461 aa4.54□□□□□ -1.68
SDCBPP3-201ENST00000419629 ESPNLQ6ZVH7 1005 aa4.54□□□□□ -1.68
SDCBPP3-201ENST00000419629 RNF180Q86T96 592 aa4.54□□□□□ -1.68
SDCBPP3-201ENST00000419629 ADGRG3Q86Y34 549 aa4.54□□□□□ -1.68
SDCBPP3-201ENST00000419629 ZNF610Q8N9Z0 462 aa4.54□□□□□ -1.68
SDCBPP3-201ENST00000419629 BEND2Q8NDZ0 799 aa4.54□□□□□ -1.68
SDCBPP3-201ENST00000419629 FERMT2Q96AC1 680 aa4.54□□□□□ -1.68
SDCBPP3-201ENST00000419629 NAF1Q96HR8 494 aaKnown RBP4.54□□□□□ -1.68
SDCBPP3-201ENST00000419629 SPC25Q9HBM1 224 aa4.54□□□□□ -1.68
SDCBPP3-201ENST00000419629 H2AFY2Q9P0M6 372 aaPredicted RBP4.54□□□□□ -1.68
SDCBPP3-201ENST00000419629 EIF2B4Q9UI10 523 aaKnown RBP4.54□□□□□ -1.68
SDCBPP3-201ENST00000419629 TRIM24O15164 1050 aa4.53□□□□□ -1.68
SDCBPP3-201ENST00000419629 HOXA3O43365 443 aaPredicted RBP4.53□□□□□ -1.68
SDCBPP3-201ENST00000419629 SCAF4O95104 1147 aaKnown RBP4.53□□□□□ -1.68
SDCBPP3-201ENST00000419629 VIL1P09327 827 aaKnown RBP4.53□□□□□ -1.68
SDCBPP3-201ENST00000419629 BPIP17213 487 aa4.53□□□□□ -1.68
SDCBPP3-201ENST00000419629 HK1P19367 917 aa4.53□□□□□ -1.68
SDCBPP3-201ENST00000419629 ADCYAP1R1P41586 468 aa4.53□□□□□ -1.68
SDCBPP3-201ENST00000419629 TAP1Q03518 808 aa4.53□□□□□ -1.68
SDCBPP3-201ENST00000419629 FAPQ12884 760 aa4.53□□□□□ -1.68
SDCBPP3-201ENST00000419629 STRN3Q13033 797 aa4.53□□□□□ -1.68
SDCBPP3-201ENST00000419629 FAM214AQ32MH5 1076 aa4.53□□□□□ -1.68
SDCBPP3-201ENST00000419629 ESRP1Q6NXG1 681 aaKnown RBP4.53□□□□□ -1.68
SDCBPP3-201ENST00000419629 FRMD7Q6ZUT3 714 aa4.53□□□□□ -1.68
SDCBPP3-201ENST00000419629 UIMC1Q96RL1 719 aa4.53□□□□□ -1.68
SDCBPP3-201ENST00000419629 OSBPL6Q9BZF3 934 aa4.53□□□□□ -1.68
SDCBPP3-201ENST00000419629 PITHD1Q9GZP4 211 aaPredicted RBP4.53□□□□□ -1.68
SDCBPP3-201ENST00000419629 ENKD1Q9H0I2 346 aa4.53□□□□□ -1.68
SDCBPP3-201ENST00000419629 ZNF768Q9H5H4 540 aaKnown RBP4.53□□□□□ -1.68
SDCBPP3-201ENST00000419629 ZMAT4Q9H898 229 aa4.53□□□□□ -1.68
SDCBPP3-201ENST00000419629 SPTLC3Q9NUV7 552 aa4.53□□□□□ -1.68
SDCBPP3-201ENST00000419629 CADPSQ9ULU8 1353 aa4.53□□□□□ -1.69
SDCBPP3-201ENST00000419629 A0A0A6YYJ9 748 aa4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 A0A0A6YYK5 440 aaPredicted RBP4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 CENPVL1A0A0U1RR11 272 aa4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 AHRRA9YTQ3 701 aa4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 NRP1O14786 923 aa4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 KIAA0355O15063 1070 aa4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 PRPF6O94906 941 aaKnown RBP4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 LAG3P18627 525 aa4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 CLK3P49761 638 aaKnown RBP4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 USP14P54578 494 aa4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 SESN3P58005 492 aa4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 MAN2A1Q16706 1144 aa4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 KIAA1841Q6NSI8 718 aa4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 KANSL1Q7Z3B3 1105 aa4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 UBR7Q8N806 425 aa4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 SUPT20HQ8NEM7 779 aa4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 RTF1Q92541 710 aaKnown RBP4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 SLC5A5Q92911 643 aa4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 MYEOVQ96EZ4 313 aa4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 SOX7Q9BT81 388 aa4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 MYL10Q9BUA6 226 aa4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 WNT8AQ9H1J5 351 aa4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 KCNH6Q9H252 994 aa4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 EMC7Q9NPA0 242 aa4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 ADARB2Q9NS39 739 aaKnown RBP4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 MSRAQ9UJ68 235 aa4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 MCM8Q9UJA3 840 aa4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 HDAC5Q9UQL6 1122 aa4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 NOC2LQ9Y3T9 749 aaKnown RBP4.52□□□□□ -1.69
SDCBPP3-201ENST00000419629 NEMP1O14524 444 aa4.51□□□□□ -1.69
SDCBPP3-201ENST00000419629 TGM5O43548 720 aa4.51□□□□□ -1.69
SDCBPP3-201ENST00000419629 CD38P28907 300 aa4.51□□□□□ -1.69
SDCBPP3-201ENST00000419629 FAM189BP81408 668 aa4.51□□□□□ -1.69
SDCBPP3-201ENST00000419629 TERF2Q15554 542 aa4.51□□□□□ -1.69
SDCBPP3-201ENST00000419629 METTL24Q5JXM2 366 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms