RNA–Protein interactions for RNA: ENST00000419023.2

VPS45-203, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-203ENST00000419023 RTP5Q14D33 572 aa6.96□□□□□ -1.3
VPS45-203ENST00000419023 SKIDA1Q1XH10 827 aa6.96□□□□□ -1.3
VPS45-203ENST00000419023 SKOR2Q2VWA4 1001 aaPredicted RBP6.96□□□□□ -1.3
VPS45-203ENST00000419023 EGFLAMQ63HQ2 1017 aa6.96□□□□□ -1.3
VPS45-203ENST00000419023 LCNL1Q6ZST4 164 aa6.96□□□□□ -1.3
VPS45-203ENST00000419023 MORC1Q86VD1 984 aa6.96□□□□□ -1.3
VPS45-203ENST00000419023 NBPF5PQ86XG9 351 aaPredicted RBP6.96□□□□□ -1.3
VPS45-203ENST00000419023 NXPE1Q8N323 547 aa6.96□□□□□ -1.3
VPS45-203ENST00000419023 PPM1KQ8N3J5 372 aa6.96□□□□□ -1.3
VPS45-203ENST00000419023 DTX3Q8N9I9 347 aa6.96□□□□□ -1.3
VPS45-203ENST00000419023 LINC01356Q8N9X3 169 aa6.96□□□□□ -1.3
VPS45-203ENST00000419023 DLL4Q9NR61 685 aa6.96□□□□□ -1.3
VPS45-203ENST00000419023 ZNF277Q9NRM2 450 aaPredicted RBP6.96□□□□□ -1.3
VPS45-203ENST00000419023 ARHGAP28Q9P2N2 729 aa6.96□□□□□ -1.3
VPS45-203ENST00000419023 B3GALT1Q9Y5Z6 326 aa6.96□□□□□ -1.3
VPS45-203ENST00000419023 MYH14Q7Z406 1995 aaKnown RBP6.96□□□□□ -1.3
VPS45-203ENST00000419023 CCDC88AQ3V6T2 1871 aa6.96□□□□□ -1.3
VPS45-203ENST00000419023 SH3D21A4FU49 640 aa6.95□□□□□ -1.3
VPS45-203ENST00000419023 ZNF839A8K0R7 811 aa6.95□□□□□ -1.3
VPS45-203ENST00000419023 ZNF891A8MT65 544 aaPredicted RBP6.95□□□□□ -1.3
VPS45-203ENST00000419023 GSG1L2A8MUP6 293 aa6.95□□□□□ -1.3
VPS45-203ENST00000419023 RNMTO43148 476 aaKnown RBP6.95□□□□□ -1.3
VPS45-203ENST00000419023 MMEP08473 750 aa6.95□□□□□ -1.3
VPS45-203ENST00000419023 IL6STP40189 918 aaPredicted RBP6.95□□□□□ -1.3
VPS45-203ENST00000419023 IARSP41252 1262 aaKnown RBP6.95□□□□□ -1.3
VPS45-203ENST00000419023 EIF5P55010 431 aaKnown RBP6.95□□□□□ -1.3
VPS45-203ENST00000419023 AHI1Q8N157 1196 aa6.95□□□□□ -1.3
VPS45-203ENST00000419023 SYNE4Q8N205 404 aa6.95□□□□□ -1.3
VPS45-203ENST00000419023 NTMQ9P121 344 aa6.95□□□□□ -1.3
VPS45-203ENST00000419023 ZKSCAN5Q9Y2L8 839 aa6.95□□□□□ -1.3
VPS45-203ENST00000419023 H7C1D1 291 aa6.94□□□□□ -1.3
VPS45-203ENST00000419023 DVL2O14641 736 aa6.94□□□□□ -1.3
VPS45-203ENST00000419023 FOXP2O15409 715 aa6.94□□□□□ -1.3
VPS45-203ENST00000419023 RPL13P26373 211 aaKnown RBP6.94□□□□□ -1.3
VPS45-203ENST00000419023 SARSP49591 514 aaKnown RBP6.94□□□□□ -1.3
VPS45-203ENST00000419023 KIF11P52732 1056 aa6.94□□□□□ -1.3
VPS45-203ENST00000419023 HERVK_113P62684 666 aa6.94□□□□□ -1.3
VPS45-203ENST00000419023 SEPT7Q16181 437 aaKnown RBP6.94□□□□□ -1.3
VPS45-203ENST00000419023 PRAMEF18Q5VWM3 479 aa6.94□□□□□ -1.3
VPS45-203ENST00000419023 USP50Q70EL3 339 aaPredicted RBP6.94□□□□□ -1.3
VPS45-203ENST00000419023 CARFQ8N187 725 aa6.94□□□□□ -1.3
VPS45-203ENST00000419023 IGDCC4Q8TDY8 1250 aa6.94□□□□□ -1.3
VPS45-203ENST00000419023 LEO1Q8WVC0 666 aaPredicted RBP6.94□□□□□ -1.3
VPS45-203ENST00000419023 ORAI3Q9BRQ5 295 aa6.94□□□□□ -1.3
VPS45-203ENST00000419023 ARHGAP20Q9P2F6 1191 aa6.94□□□□□ -1.3
VPS45-203ENST00000419023 ZFP69BQ9UJL9 534 aa6.94□□□□□ -1.3
VPS45-203ENST00000419023 ZNF541Q9H0D2 1346 aa6.94□□□□□ -1.3
VPS45-203ENST00000419023 SCN4AP35499 1836 aa6.94□□□□□ -1.3
VPS45-203ENST00000419023 ANKRD26Q9UPS8 1709 aa6.93□□□□□ -1.3
VPS45-203ENST00000419023 DLEC1Q9Y238 1755 aa6.93□□□□□ -1.3
VPS45-203ENST00000419023 hCG_2014768A0A024R1R8 64 aa6.93□□□□□ -1.3
VPS45-203ENST00000419023 FZD9O00144 591 aa6.93□□□□□ -1.3
VPS45-203ENST00000419023 DDX3XO00571 662 aaKnown RBP eCLIP6.93□□□□□ -1.3
VPS45-203ENST00000419023 CELF2O95319 508 aaKnown RBP6.93□□□□□ -1.3
VPS45-203ENST00000419023 F2P00734 622 aa6.93□□□□□ -1.3
VPS45-203ENST00000419023 AOAHP28039 575 aa6.93□□□□□ -1.3
VPS45-203ENST00000419023 MC4RP32245 332 aa6.93□□□□□ -1.3
VPS45-203ENST00000419023 SLURP1P55000 103 aa6.93□□□□□ -1.3
VPS45-203ENST00000419023 MLLT6P55198 1093 aaPredicted RBP6.93□□□□□ -1.3
VPS45-203ENST00000419023 PRR31Q5SQ13 230 aa6.93□□□□□ -1.3
VPS45-203ENST00000419023 RNF187Q5TA31 235 aaPredicted RBP6.93□□□□□ -1.3
VPS45-203ENST00000419023 CLEC4GQ6UXB4 293 aa6.93□□□□□ -1.3
VPS45-203ENST00000419023 ZNF662Q6ZS27 426 aa6.93□□□□□ -1.3
VPS45-203ENST00000419023 KIF18BQ86Y91 864 aa6.93□□□□□ -1.3
VPS45-203ENST00000419023 SIAH1Q8IUQ4 282 aa6.93□□□□□ -1.3
VPS45-203ENST00000419023 GCC1Q96CN9 775 aa6.93□□□□□ -1.3
VPS45-203ENST00000419023 GBP4Q96PP9 640 aa6.93□□□□□ -1.3
VPS45-203ENST00000419023 WRNIP1Q96S55 665 aa6.93□□□□□ -1.3
VPS45-203ENST00000419023 SPATA25Q9BR10 227 aa6.93□□□□□ -1.3
VPS45-203ENST00000419023 TACO1Q9BSH4 297 aaKnown RBP6.93□□□□□ -1.3
VPS45-203ENST00000419023 CHMP4AQ9BY43 222 aa6.93□□□□□ -1.3
VPS45-203ENST00000419023 IFT57Q9NWB7 429 aa6.93□□□□□ -1.3
VPS45-203ENST00000419023 BTBD7Q9P203 1132 aa6.93□□□□□ -1.3
VPS45-203ENST00000419023 ADAMTS20P59510 1910 aa6.93□□□□□ -1.3
VPS45-203ENST00000419023 AFDNP55196 1824 aaKnown RBP6.92□□□□□ -1.3
VPS45-203ENST00000419023 DICER1Q9UPY3 1922 aaKnown RBP6.92□□□□□ -1.3
VPS45-203ENST00000419023 TRIM13O60858 407 aa6.92□□□□□ -1.3
VPS45-203ENST00000419023 GAS7O60861 476 aa6.92□□□□□ -1.3
VPS45-203ENST00000419023 FBXO21O94952 628 aa6.92□□□□□ -1.3
VPS45-203ENST00000419023 IL18BPO95998 194 aa6.92□□□□□ -1.3
VPS45-203ENST00000419023 ATP2A2P16615 1042 aaKnown RBP6.92□□□□□ -1.3
VPS45-203ENST00000419023 BMP7P18075 431 aa6.92□□□□□ -1.3
VPS45-203ENST00000419023 PTGS1P23219 599 aa6.92□□□□□ -1.3
VPS45-203ENST00000419023 SDHAP31040 664 aa6.92□□□□□ -1.3
VPS45-203ENST00000419023 MASP1P48740 699 aa6.92□□□□□ -1.3
VPS45-203ENST00000419023 DSG1Q02413 1049 aa6.92□□□□□ -1.3
VPS45-203ENST00000419023 NOGQ13253 232 aa6.92□□□□□ -1.3
VPS45-203ENST00000419023 ZNF174Q15697 407 aa6.92□□□□□ -1.3
VPS45-203ENST00000419023 KRTAP19-4Q3LI73 84 aa6.92□□□□□ -1.3
VPS45-203ENST00000419023 CATSPEREQ5SY80 951 aa6.92□□□□□ -1.3
VPS45-203ENST00000419023 CREB3L3Q68CJ9 461 aa6.92□□□□□ -1.3
VPS45-203ENST00000419023 CC2D1AQ6P1N0 951 aaPredicted RBP6.92□□□□□ -1.3
VPS45-203ENST00000419023 THNSL2Q86YJ6 484 aa6.92□□□□□ -1.3
VPS45-203ENST00000419023 STPG3Q8N7X2 389 aa6.92□□□□□ -1.3
VPS45-203ENST00000419023 KIAA1958Q8N8K9 716 aa6.92□□□□□ -1.3
VPS45-203ENST00000419023 HIPK4Q8NE63 616 aa6.92□□□□□ -1.3
VPS45-203ENST00000419023 ASB15Q8WXK1 588 aa6.92□□□□□ -1.3
VPS45-203ENST00000419023 ERCC4Q92889 916 aaPredicted RBP6.92□□□□□ -1.3
VPS45-203ENST00000419023 PSMD1Q99460 953 aa6.92□□□□□ -1.3
VPS45-203ENST00000419023 PCIF1Q9H4Z3 704 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms