RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 C16orf71Q8IYS4 520 aaPredicted RBP7.07□□□□□ -1.28
NIFKP3-201ENST00000417799 VGLL2Q8N8G2 317 aa7.07□□□□□ -1.28
NIFKP3-201ENST00000417799 EAF2Q96CJ1 260 aaPredicted RBP7.07□□□□□ -1.28
NIFKP3-201ENST00000417799 TTC1Q99614 292 aa7.07□□□□□ -1.28
NIFKP3-201ENST00000417799 IFT22Q9H7X7 185 aa7.07□□□□□ -1.28
NIFKP3-201ENST00000417799 SMURF1Q9HCE7 757 aa7.07□□□□□ -1.28
NIFKP3-201ENST00000417799 GPR108Q9NPR9 543 aa7.07□□□□□ -1.28
NIFKP3-201ENST00000417799 DSEQ9UL01 958 aa7.07□□□□□ -1.28
NIFKP3-201ENST00000417799 ANKRD31Q8N7Z5 1873 aa7.07□□□□□ -1.28
NIFKP3-201ENST00000417799 A0A0G2JLW4 131 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 SLC12A8A0AV02 714 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 HGSO14964 777 aaPredicted RBP7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 BRINP1O60477 761 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 TAF5LO75529 589 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 PDE8BO95263 885 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 CYBBP04839 570 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 IFIT2P09913 472 aaKnown RBP7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 BPIP17213 487 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 RGS3P49796 1198 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 ERVFRD-1P60508 538 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 IL2P60568 153 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 EMC4Q5J8M3 183 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 PAQR3Q6TCH7 311 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 OTOP1Q7RTM1 612 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 ATG4DQ86TL0 474 aaPredicted RBP7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 AACSQ86V21 672 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 PTRH1Q86Y79 214 aaKnown RBP7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 SP8Q8IXZ3 490 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 UHMK1Q8TAS1 419 aaKnown RBP7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 OTUD7AQ8TE49 926 aaPredicted RBP7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 SEC14L1Q92503 715 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 ANKRD2Q9GZV1 360 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 AP5M1Q9H0R1 490 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 SMOC1Q9H4F8 434 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 RXFP1Q9HBX9 757 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 NUDT5Q9UKK9 219 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 SIT1Q9Y3P8 196 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 ATP6V0A2Q9Y487 856 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 NUB1Q9Y5A7 615 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 OAS3Q9Y6K5 1087 aaKnown RBP7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 FPGT-TNNI3KV9GXZ4 949 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 COL4A1P02462 1669 aa7.06□□□□□ -1.28
NIFKP3-201ENST00000417799 LRP5O75197 1615 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 KRTAP4-8A0A0G2JLE6 195 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 A0A1B0GUL7 405 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 ZC3H12DA2A288 527 aaKnown RBP7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 F8W031 263 aaPredicted RBP7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 NEMP1O14524 444 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 KCNK3O14649 394 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 ZEB2O60315 1214 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 TADA3O75528 432 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 MPOP05164 745 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 ATP2A2P16615 1042 aaKnown RBP7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 MX1P20591 662 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 FGFR2P21802 821 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 SDHBP21912 280 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 KCNA3P22001 575 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 PDE1AP54750 535 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 TIMM10P62072 90 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 UBE4AQ14139 1066 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 STAT4Q14765 748 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 PUM3Q15397 648 aaKnown RBP7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 ATP2B3Q16720 1220 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 CYP4F22Q6NT55 531 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 HHIPL2Q6UWX4 724 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 CBLL1Q75N03 491 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 TTLL6Q8N841 843 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 SMC1BQ8NDV3 1235 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 WDR66Q8TBY9 1149 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 SH3RF2Q8TEC5 729 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 LPIN2Q92539 896 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 PEX11GQ96HA9 241 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 NEUROD6Q96NK8 337 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 GPR101Q96P66 508 aaPredicted RBP7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 BOCQ9BWV1 1114 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 CCDC8Q9H0W5 538 aaPredicted RBP7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 TMX4Q9H1E5 349 aaPredicted RBP7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 HOMER2Q9NSB8 354 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 THG1LQ9NWX6 298 aaKnown RBP7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 STAP2Q9UGK3 403 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 DBR1Q9UK59 544 aaKnown RBP7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 SRPK3Q9UPE1 567 aa7.05□□□□□ -1.28
NIFKP3-201ENST00000417799 XDHP47989 1333 aa7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 SALL3Q9BXA9 1300 aa7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 MAN2B1O00754 1011 aa7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 SLC27A2O14975 620 aa7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 SGSM2O43147 1006 aa7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 KRT37O76014 449 aa7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 FKBP9O95302 570 aa7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 IFIT1P09914 478 aaKnown RBP7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 SLC5A1P13866 664 aa7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 ADCYAP1R1P41586 468 aa7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 KCNJ4P48050 445 aa7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 GPSM2P81274 684 aa7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 NR1I3Q14994 352 aa7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 ADGRF1Q5T601 910 aa7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 FKBP9P1Q75LS8 142 aa7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 NLGN4XQ8N0W4 816 aa7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 PHOSPHO1Q8TCT1 267 aa7.04□□□□□ -1.28
NIFKP3-201ENST00000417799 CHTF18Q8WVB6 975 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms