RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 PRPF31Q8WWY3 499 aaKnown RBP18.23■□□□□ 0.51
SSBP3-205ENST00000417664 LACRTQ9GZZ8 138 aa18.23■□□□□ 0.51
SSBP3-205ENST00000417664 DNAJC12Q9UKB3 198 aa18.23■□□□□ 0.51
SSBP3-205ENST00000417664 TRPC6Q9Y210 931 aa18.23■□□□□ 0.51
SSBP3-205ENST00000417664 GOLGA8IPA6NC78 632 aa18.22■□□□□ 0.51
SSBP3-205ENST00000417664 GOLGA8JA6NMD2 632 aa18.22■□□□□ 0.51
SSBP3-205ENST00000417664 F8VZ95 297 aa18.22■□□□□ 0.51
SSBP3-205ENST00000417664 SOX5P35711 763 aa18.22■□□□□ 0.51
SSBP3-205ENST00000417664 GCLMP48507 274 aa18.22■□□□□ 0.51
SSBP3-205ENST00000417664 TFDP1Q14186 410 aa18.22■□□□□ 0.51
SSBP3-205ENST00000417664 DUSP28Q4G0W2 176 aa18.22■□□□□ 0.51
SSBP3-205ENST00000417664 RGMBQ6NW40 437 aa18.22■□□□□ 0.51
SSBP3-205ENST00000417664 SAPCD2Q86UD0 394 aa18.22■□□□□ 0.51
SSBP3-205ENST00000417664 ZBTB8OSQ8IWT0 167 aa18.22■□□□□ 0.51
SSBP3-205ENST00000417664 RNF10Q8N5U6 811 aaKnown RBP18.22■□□□□ 0.51
SSBP3-205ENST00000417664 TRIM58Q8NG06 486 aa18.22■□□□□ 0.51
SSBP3-205ENST00000417664 SECISBP2LQ93073 1101 aaKnown RBP18.22■□□□□ 0.51
SSBP3-205ENST00000417664 SAAL1Q96ER3 474 aa18.22■□□□□ 0.51
SSBP3-205ENST00000417664 TMEM117Q9H0C3 514 aa18.22■□□□□ 0.51
SSBP3-205ENST00000417664 ZNF215Q9UL58 517 aaPredicted RBP18.22■□□□□ 0.51
SSBP3-205ENST00000417664 COL1A2P08123 1366 aa18.22■□□□□ 0.51
SSBP3-205ENST00000417664 ANO9A1A5B4 782 aa18.22■□□□□ 0.51
SSBP3-205ENST00000417664 MAGEB2O15479 319 aa18.22■□□□□ 0.51
SSBP3-205ENST00000417664 ABL1P00519 1130 aa18.22■□□□□ 0.51
SSBP3-205ENST00000417664 GFPT1Q06210 699 aaPredicted RBP18.22■□□□□ 0.51
SSBP3-205ENST00000417664 PLEKHO2Q8TD55 490 aa18.22■□□□□ 0.51
SSBP3-205ENST00000417664 FAM81BQ96LP2 452 aa18.22■□□□□ 0.51
SSBP3-205ENST00000417664 AGO2Q9UKV8 859 aaKnown RBP18.22■□□□□ 0.51
SSBP3-205ENST00000417664 RCCD1A6NED2 376 aa18.21■□□□□ 0.51
SSBP3-205ENST00000417664 LGALS2P05162 132 aa18.21■□□□□ 0.51
SSBP3-205ENST00000417664 HOXD8P13378 290 aaPredicted RBP18.21■□□□□ 0.51
SSBP3-205ENST00000417664 CLDN10P78369 228 aa18.21■□□□□ 0.51
SSBP3-205ENST00000417664 ARID5AQ03989 594 aa18.21■□□□□ 0.51
SSBP3-205ENST00000417664 PTK2Q05397 1052 aa18.21■□□□□ 0.51
SSBP3-205ENST00000417664 POU5F1BQ06416 359 aa18.21■□□□□ 0.51
SSBP3-205ENST00000417664 LAMTOR4Q0VGL1 99 aa18.21■□□□□ 0.51
SSBP3-205ENST00000417664 ACVR2BQ13705 512 aa18.21■□□□□ 0.51
SSBP3-205ENST00000417664 BMS1Q14692 1282 aaKnown RBP18.21■□□□□ 0.51
SSBP3-205ENST00000417664 DRAP1Q14919 205 aaPredicted RBP18.21■□□□□ 0.51
SSBP3-205ENST00000417664 TAF1CQ15572 869 aaPredicted RBP18.21■□□□□ 0.51
SSBP3-205ENST00000417664 MORN1Q5T089 497 aa18.21■□□□□ 0.51
SSBP3-205ENST00000417664 ZSWIM2Q8NEG5 633 aa18.21■□□□□ 0.51
SSBP3-205ENST00000417664 MRPL4Q9BYD3 311 aaKnown RBP18.21■□□□□ 0.51
SSBP3-205ENST00000417664 SUGCTQ9HAC7 445 aa18.21■□□□□ 0.51
SSBP3-205ENST00000417664 TRIM10Q9UDY6 481 aa18.21■□□□□ 0.51
SSBP3-205ENST00000417664 ADAMTS1Q9UHI8 967 aa18.21■□□□□ 0.51
SSBP3-205ENST00000417664 CDC23Q9UJX2 597 aa18.21■□□□□ 0.51
SSBP3-205ENST00000417664 A0A0B4J269 797 aa18.2■□□□□ 0.5
SSBP3-205ENST00000417664 LRRIQ3A6PVS8 624 aaPredicted RBP18.2■□□□□ 0.5
SSBP3-205ENST00000417664 IGF2BP3O00425 579 aaKnown RBP eCLIP18.2■□□□□ 0.5
SSBP3-205ENST00000417664 TACC1O75410 805 aa18.2■□□□□ 0.5
SSBP3-205ENST00000417664 HOXC6P09630 235 aa18.2■□□□□ 0.5
SSBP3-205ENST00000417664 ADCYAP1R1P41586 468 aa18.2■□□□□ 0.5
SSBP3-205ENST00000417664 GPC3P51654 580 aa18.2■□□□□ 0.5
SSBP3-205ENST00000417664 TUBB4BP68371 445 aa18.2■□□□□ 0.5
SSBP3-205ENST00000417664 MAP2K5Q13163 448 aa18.2■□□□□ 0.5
SSBP3-205ENST00000417664 PSMD6Q15008 389 aa18.2■□□□□ 0.5
SSBP3-205ENST00000417664 PHLDB3Q6NSJ2 640 aa18.2■□□□□ 0.5
SSBP3-205ENST00000417664 MNS1Q8NEH6 495 aa18.2■□□□□ 0.5
SSBP3-205ENST00000417664 FAM213AQ9BRX8 229 aa18.2■□□□□ 0.5
SSBP3-205ENST00000417664 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.2■□□□□ 0.5
SSBP3-205ENST00000417664 NFKBIZQ9BYH8 718 aa18.2■□□□□ 0.5
SSBP3-205ENST00000417664 CCDC113Q9H0I3 377 aa18.2■□□□□ 0.5
SSBP3-205ENST00000417664 SUCLA2Q9P2R7 463 aaPredicted RBP18.2■□□□□ 0.5
SSBP3-205ENST00000417664 A0A087X0T9 212 aa18.19■□□□□ 0.5
SSBP3-205ENST00000417664 BTNL10A8MVZ5 291 aa18.19■□□□□ 0.5
SSBP3-205ENST00000417664 EVI5O60447 810 aa18.19■□□□□ 0.5
SSBP3-205ENST00000417664 ZC3H11AO75152 810 aaKnown RBP eCLIP18.19■□□□□ 0.51e-8■□□□□ 9.1
SSBP3-205ENST00000417664 SLC10A3P09131 477 aa18.19■□□□□ 0.5
SSBP3-205ENST00000417664 FAM228BP0C875 321 aa18.19■□□□□ 0.5
SSBP3-205ENST00000417664 MKRN4PQ13434 485 aaPredicted RBP18.19■□□□□ 0.5
SSBP3-205ENST00000417664 MAPK6Q16659 721 aa18.19■□□□□ 0.5
SSBP3-205ENST00000417664 GJB7Q6PEY0 223 aa18.19■□□□□ 0.5
SSBP3-205ENST00000417664 ZNF571Q7Z3V5 609 aaPredicted RBP18.19■□□□□ 0.5
SSBP3-205ENST00000417664 FBXL13Q8NEE6 735 aa18.19■□□□□ 0.5
SSBP3-205ENST00000417664 CCDC127Q96BQ5 260 aa18.19■□□□□ 0.5
SSBP3-205ENST00000417664 ALS2CR12Q96Q35 445 aa18.19■□□□□ 0.5
SSBP3-205ENST00000417664 CPA4Q9UI42 421 aa18.19■□□□□ 0.5
SSBP3-205ENST00000417664 AJAP1Q9UKB5 411 aaPredicted RBP18.19■□□□□ 0.5
SSBP3-205ENST00000417664 EFCAB8A8MWE9 144 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 TOM1L1O75674 476 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 DRP2Q13474 957 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 NAB2Q15742 525 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 TMEM63BQ5T3F8 832 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 EFCAB12Q6NXP0 572 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 C17orf99Q6UX52 265 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 IFNL1Q8IU54 200 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 RNF149Q8NC42 400 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 NPLOC4Q8TAT6 608 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 AFG1LQ8WV93 481 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 CCDC102AQ96A19 550 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 FNBP1Q96RU3 617 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 TARS2Q9BW92 718 aaKnown RBP18.18■□□□□ 0.5
SSBP3-205ENST00000417664 UBE2TQ9NPD8 197 aaPredicted RBP18.18■□□□□ 0.5
SSBP3-205ENST00000417664 INTUQ9ULD6 942 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 CLDN3O15551 220 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 MSCO60682 206 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 C22orf31O95567 290 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 SREBF2Q12772 1141 aa18.18■□□□□ 0.5
SSBP3-205ENST00000417664 KIF22Q14807 665 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms