RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 PDE8BO95263 885 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 HTR3BO95264 441 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 SRGAP2BP0DMP2 458 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 CALRP27797 417 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 CD68P34810 354 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 BMPR1AP36894 532 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 GMPRP36959 345 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 TMEM132BQ14DG7 1078 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 RAB3GAP1Q15042 981 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 PUM3Q15397 648 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 SPECC1Q5M775 1068 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 C19orf48Q6RUI8 117 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 RUFY4Q6ZNE9 571 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 PRR23CQ6ZRP0 262 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 ARMCX2Q7L311 632 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 RIOX2Q8IUF8 465 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 MAP4K3Q8IVH8 894 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 FIBCD1Q8N539 461 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 VGLL2Q8N8G2 317 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 TDRD5Q8NAT2 981 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 SPATA18Q8TC71 538 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 ACER1Q8TDN7 264 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 ATG4CQ96DT6 458 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 MRFAP1L1Q96HT8 127 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 CEP83Q9Y592 693 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 RAI2Q9Y5P3 530 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 NLRC5Q86WI3 1866 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 FRYLO94915 3013 aa6.38□□□□□ -1.39
ECHDC1-206ENST00000417628 MYH2Q9UKX2 1941 aa6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 MEIS3P2A8K0S8 358 aa6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 DYNC1LI2O43237 492 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 ZNF500O60304 480 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 FLOT1O75955 427 aa6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 AMPD1P23109 780 aa6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 DGKGP49619 791 aa6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 COL28A1Q2UY09 1125 aa6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 HSP90AB4PQ58FF6 505 aa6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 ZC3H12AQ5D1E8 599 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 SDE2Q6IQ49 451 aa6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 NFRKBQ6P4R8 1299 aa6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 HDXQ7Z353 690 aa6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 RBM23Q86U06 439 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 ZSCAN30Q86W11 494 aa6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 MICAL1Q8TDZ2 1067 aa6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 DDX11Q96FC9 970 aa6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 FAM210AQ96ND0 272 aa6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 SRPK1Q96SB4 655 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 RXFP3Q9NSD7 469 aa6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 SNTG2Q9NY99 539 aa6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 ACTR10Q9NZ32 417 aa6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 CALCOCO1Q9P1Z2 691 aa6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 MSRB2Q9Y3D2 182 aa6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 R3HCC1Q9Y3T6 440 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-206ENST00000417628 DNAJC25-GNG10A0A024R161 153 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 FOXD2O60548 495 aaPredicted RBP6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 DNAJA2O60884 412 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 WFS1O76024 890 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 DCNP07585 359 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 NEFHP12036 1026 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 XRCC6P12956 609 aaKnown RBP eCLIP6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 SPINK2P20155 84 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 PURAQ00577 322 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 SRSF1Q07955 248 aaKnown RBP eCLIP6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 CAMK1Q14012 370 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 CCDC6Q16204 474 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 CCDC30Q5VVM6 783 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 TSHZ1Q6ZSZ6 1077 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 C12orf40Q86WS4 652 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 FOXP4Q8IVH2 680 aaPredicted RBP6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 TEX11Q8IYF3 940 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 MAML2Q8IZL2 1156 aaPredicted RBP6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 ZDHHC14Q8IZN3 488 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 MNS1Q8NEH6 495 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 TET1Q8NFU7 2136 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 LINS1Q8NG48 757 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 UBASH3BQ8TF42 649 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 ATP8B4Q8TF62 1192 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 MAP4K1Q92918 833 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 TIGD1Q96MW7 591 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 NECTIN4Q96NY8 510 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 DEPDC7Q96QD5 511 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 MTG1Q9BT17 334 aaPredicted RBP6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 PLVAPQ9BX97 442 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 KATNBL1Q9H079 304 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 S1PR5Q9H228 398 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 TBC1D17Q9HA65 648 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 GPR108Q9NPR9 543 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 ST7Q9NRC1 585 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 SEMA4GQ9NTN9 838 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 GNL3LQ9NVN8 582 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 DLGAP2Q9P1A6 1054 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 REV1Q9UBZ9 1251 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 FBXO4Q9UKT5 387 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 RAB23Q9ULC3 237 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 DENND2AQ9ULE3 1009 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 DUSP12Q9UNI6 340 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 Q9Y3F1 56 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 SH3BP1Q9Y3L3 701 aa6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 MRPL42Q9Y6G3 142 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-206ENST00000417628 USP9XQ93008 2570 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms