RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.09■■■□□ 2.09
VEGFA-208ENST00000417285 USO1O60763 962 aaKnown RBP28.09■■■□□ 2.09
VEGFA-208ENST00000417285 AMHR2Q16671 573 aa28.09■■■□□ 2.09
VEGFA-208ENST00000417285 TTC38Q5R3I4 469 aa28.09■■■□□ 2.09
VEGFA-208ENST00000417285 PPFIBP1Q86W92 1011 aa28.09■■■□□ 2.09
VEGFA-208ENST00000417285 NECTIN4Q96NY8 510 aa28.09■■■□□ 2.09
VEGFA-208ENST00000417285 EIF2AQ9BY44 585 aaKnown RBP28.09■■■□□ 2.09
VEGFA-208ENST00000417285 TRIM6Q9C030 488 aaPredicted RBP28.09■■■□□ 2.09
VEGFA-208ENST00000417285 ADAM7Q9H2U9 754 aa28.09■■■□□ 2.09
VEGFA-208ENST00000417285 MED24O75448 989 aa28.08■■■□□ 2.09
VEGFA-208ENST00000417285 POMCP01189 267 aa28.08■■■□□ 2.09
VEGFA-208ENST00000417285 ARF4P18085 180 aaPredicted RBP28.08■■■□□ 2.09
VEGFA-208ENST00000417285 AFF1P51825 1210 aaKnown RBP28.08■■■□□ 2.09
VEGFA-208ENST00000417285 BCL7CQ8WUZ0 217 aaPredicted RBP28.08■■■□□ 2.09
VEGFA-208ENST00000417285 CPB2Q96IY4 423 aa28.08■■■□□ 2.09
VEGFA-208ENST00000417285 DZANK1Q9NVP4 752 aa28.08■■■□□ 2.09
VEGFA-208ENST00000417285 GIT1Q9Y2X7 761 aa28.08■■■□□ 2.09
VEGFA-208ENST00000417285 ARID2Q68CP9 1835 aa28.08■■■□□ 2.09
VEGFA-208ENST00000417285 A0A1B0GUA9 196 aa28.07■■■□□ 2.08
VEGFA-208ENST00000417285 ARL5CA6NH57 179 aa28.07■■■□□ 2.08
VEGFA-208ENST00000417285 NR1I2O75469 434 aa28.07■■■□□ 2.08
VEGFA-208ENST00000417285 APOL5Q9BWW9 433 aa28.07■■■□□ 2.08
VEGFA-208ENST00000417285 RNF39Q9H2S5 420 aa28.07■■■□□ 2.08
VEGFA-208ENST00000417285 DAXXQ9UER7 740 aaPredicted RBP28.07■■■□□ 2.08
VEGFA-208ENST00000417285 STK24Q9Y6E0 443 aa28.07■■■□□ 2.08
VEGFA-208ENST00000417285 NRP1O14786 923 aa28.06■■■□□ 2.08
VEGFA-208ENST00000417285 B4GALT3O60512 393 aa28.06■■■□□ 2.08
VEGFA-208ENST00000417285 U2AF2P26368 475 aaKnown RBP eCLIP28.06■■■□□ 2.082e-48■□□□□ 11.2
VEGFA-208ENST00000417285 PDIA5Q14554 519 aa28.06■■■□□ 2.08
VEGFA-208ENST00000417285 HAUS3Q68CZ6 603 aa28.06■■■□□ 2.08
VEGFA-208ENST00000417285 SLC27A1Q6PCB7 646 aa28.06■■■□□ 2.08
VEGFA-208ENST00000417285 AUTS2Q8WXX7 1259 aa28.06■■■□□ 2.08
VEGFA-208ENST00000417285 PRIMPOLQ96LW4 560 aa28.06■■■□□ 2.08
VEGFA-208ENST00000417285 GAD1Q99259 594 aa28.06■■■□□ 2.08
VEGFA-208ENST00000417285 EMILIN2Q9BXX0 1053 aa28.06■■■□□ 2.08
VEGFA-208ENST00000417285 PRMT7Q9NVM4 692 aaPredicted RBP28.06■■■□□ 2.08
VEGFA-208ENST00000417285 SSX2IPQ9Y2D8 614 aa28.06■■■□□ 2.08
VEGFA-208ENST00000417285 LRRIQ4A6NIV6 560 aa28.05■■■□□ 2.08
VEGFA-208ENST00000417285 CYP11B2P19099 503 aa28.05■■■□□ 2.08
VEGFA-208ENST00000417285 MTHFRP42898 656 aa28.05■■■□□ 2.08
VEGFA-208ENST00000417285 FXR2P51116 673 aaKnown RBP eCLIP28.05■■■□□ 2.086e-18■■■□□ 18.2
VEGFA-208ENST00000417285 PADI6Q6TGC4 694 aa28.05■■■□□ 2.08
VEGFA-208ENST00000417285 MAEAQ7L5Y9 396 aa28.05■■■□□ 2.08
VEGFA-208ENST00000417285 ZBTB8OSQ8IWT0 167 aa28.05■■■□□ 2.08
VEGFA-208ENST00000417285 COLGALT2Q8IYK4 626 aa28.05■■■□□ 2.08
VEGFA-208ENST00000417285 C4orf32Q8N8J7 132 aa28.05■■■□□ 2.08
VEGFA-208ENST00000417285 SLC22A17Q8WUG5 538 aa28.05■■■□□ 2.08
VEGFA-208ENST00000417285 MFSD14AQ96MC6 490 aa28.05■■■□□ 2.08
VEGFA-208ENST00000417285 VN1R3Q9BXE9 311 aa28.05■■■□□ 2.08
VEGFA-208ENST00000417285 C2orf40Q9H1Z8 148 aa28.05■■■□□ 2.08
VEGFA-208ENST00000417285 NR2E1Q9Y466 385 aa28.05■■■□□ 2.08
VEGFA-208ENST00000417285 ARHGEF35A5YM69 484 aa28.04■■■□□ 2.08
VEGFA-208ENST00000417285 PTPN14Q15678 1187 aa28.04■■■□□ 2.08
VEGFA-208ENST00000417285 PPP4R3CPQ6ZMV5 832 aa28.04■■■□□ 2.08
VEGFA-208ENST00000417285 RIPOR3Q96MK2 946 aa28.04■■■□□ 2.08
VEGFA-208ENST00000417285 FZD8Q9H461 694 aa28.04■■■□□ 2.08
VEGFA-208ENST00000417285 GPRC5CQ9NQ84 441 aa28.04■■■□□ 2.08
VEGFA-208ENST00000417285 MRPL17Q9NRX2 175 aaKnown RBP28.04■■■□□ 2.08
VEGFA-208ENST00000417285 HES2Q9Y543 173 aa28.04■■■□□ 2.08
VEGFA-208ENST00000417285 MLH1P40692 756 aa28.03■■■□□ 2.08
VEGFA-208ENST00000417285 ZXDAP98168 799 aa28.03■■■□□ 2.08
VEGFA-208ENST00000417285 DSC1Q08554 894 aa28.03■■■□□ 2.08
VEGFA-208ENST00000417285 FAM187BQ17R55 369 aa28.03■■■□□ 2.08
VEGFA-208ENST00000417285 ATAT1Q5SQI0 421 aa28.03■■■□□ 2.08
VEGFA-208ENST00000417285 CDCA2Q69YH5 1023 aaPredicted RBP28.03■■■□□ 2.08
VEGFA-208ENST00000417285 POTEGQ6S5H5 508 aa28.03■■■□□ 2.08
VEGFA-208ENST00000417285 TRIM67Q6ZTA4 783 aa28.03■■■□□ 2.08
VEGFA-208ENST00000417285 RAB34Q9BZG1 259 aa28.03■■■□□ 2.08
VEGFA-208ENST00000417285 LRWD1Q9UFC0 647 aa28.03■■■□□ 2.08
VEGFA-208ENST00000417285 ZMYM2Q9UBW7 1377 aa28.02■■■□□ 2.08
VEGFA-208ENST00000417285 B4GALT5O43286 388 aa28.02■■■□□ 2.08
VEGFA-208ENST00000417285 LILRB3O75022 631 aa28.02■■■□□ 2.08
VEGFA-208ENST00000417285 OR1G1P47890 313 aa28.02■■■□□ 2.08
VEGFA-208ENST00000417285 MCM2P49736 904 aa28.02■■■□□ 2.08
VEGFA-208ENST00000417285 BMP8AQ7Z5Y6 402 aa28.02■■■□□ 2.08
VEGFA-208ENST00000417285 TMX3Q96JJ7 454 aa28.02■■■□□ 2.08
VEGFA-208ENST00000417285 KCNH6Q9H252 994 aa28.02■■■□□ 2.08
VEGFA-208ENST00000417285 SOD2P04179 222 aa28.01■■■□□ 2.07
VEGFA-208ENST00000417285 KLRC2P26717 231 aa28.01■■■□□ 2.07
VEGFA-208ENST00000417285 CCT6AP40227 531 aaKnown RBP28.01■■■□□ 2.07
VEGFA-208ENST00000417285 SCNN1GP51170 649 aa28.01■■■□□ 2.07
VEGFA-208ENST00000417285 PPP2R5AQ15172 486 aa28.01■■■□□ 2.07
VEGFA-208ENST00000417285 HFE2Q6ZVN8 426 aa28.01■■■□□ 2.07
VEGFA-208ENST00000417285 CABP7Q86V35 215 aa28.01■■■□□ 2.07
VEGFA-208ENST00000417285 ZFP42Q96MM3 310 aa28.01■■■□□ 2.07
VEGFA-208ENST00000417285 KLHL5Q96PQ7 755 aa28.01■■■□□ 2.07
VEGFA-208ENST00000417285 COLEC11Q9BWP8 271 aa28.01■■■□□ 2.07
VEGFA-208ENST00000417285 APOL6Q9BWW8 343 aa28.01■■■□□ 2.07
VEGFA-208ENST00000417285 NXF3Q9H4D5 531 aaKnown RBP28.01■■■□□ 2.07
VEGFA-208ENST00000417285 MIOSQ9NXC5 875 aa28.01■■■□□ 2.07
VEGFA-208ENST00000417285 PRG3Q9Y2Y8 225 aaPredicted RBP28.01■■■□□ 2.07
VEGFA-208ENST00000417285 MUC6Q6W4X9 2439 aa28■■■□□ 2.07
VEGFA-208ENST00000417285 LAD1O00515 517 aa28■■■□□ 2.07
VEGFA-208ENST00000417285 NPTXRO95502 500 aa28■■■□□ 2.07
VEGFA-208ENST00000417285 EPCAMP16422 314 aa28■■■□□ 2.07
VEGFA-208ENST00000417285 NAMPTP43490 491 aa28■■■□□ 2.07
VEGFA-208ENST00000417285 PTGDRQ13258 359 aa28■■■□□ 2.07
VEGFA-208ENST00000417285 NBR1Q14596 966 aa28■■■□□ 2.07
VEGFA-208ENST00000417285 RARS2Q5T160 578 aaKnown RBP28■■■□□ 2.07
VEGFA-208ENST00000417285 N4BP3O15049 544 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms