RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 CDCA2Q69YH5 1023 aaPredicted RBP16.77■□□□□ 0.28
UBXN4-203ENST00000416538 ANKRD54Q6NXT1 300 aa16.77■□□□□ 0.28
UBXN4-203ENST00000416538 VPS52Q8N1B4 723 aa16.77■□□□□ 0.28
UBXN4-203ENST00000416538 MRPL43Q8N983 215 aaKnown RBP16.77■□□□□ 0.28
UBXN4-203ENST00000416538 PGBD4Q96DM1 585 aa16.77■□□□□ 0.28
UBXN4-203ENST00000416538 TMEM169Q96HH4 297 aa16.77■□□□□ 0.28
UBXN4-203ENST00000416538 ZFP42Q96MM3 310 aa16.77■□□□□ 0.28
UBXN4-203ENST00000416538 CCDC43Q96MW1 224 aaKnown RBP16.77■□□□□ 0.28
UBXN4-203ENST00000416538 GAD1Q99259 594 aa16.77■□□□□ 0.28
UBXN4-203ENST00000416538 NFKBIZQ9BYH8 718 aa16.77■□□□□ 0.28
UBXN4-203ENST00000416538 MIOSQ9NXC5 875 aa16.77■□□□□ 0.28
UBXN4-203ENST00000416538 CITO14578 2027 aa16.76■□□□□ 0.27
UBXN4-203ENST00000416538 DOCK6Q96HP0 2047 aa16.76■□□□□ 0.27
UBXN4-203ENST00000416538 PP2D1A8MPX8 630 aa16.76■□□□□ 0.27
UBXN4-203ENST00000416538 LOC730098B7Z3J9 87 aa16.76■□□□□ 0.27
UBXN4-203ENST00000416538 CTSAP10619 480 aa16.76■□□□□ 0.27
UBXN4-203ENST00000416538 XRCC6P12956 609 aaKnown RBP eCLIP16.76■□□□□ 0.27
UBXN4-203ENST00000416538 TRAPPC10P48553 1259 aa16.76■□□□□ 0.27
UBXN4-203ENST00000416538 RNASELQ05823 741 aaKnown RBP16.76■□□□□ 0.27
UBXN4-203ENST00000416538 POU5F1BQ06416 359 aa16.76■□□□□ 0.27
UBXN4-203ENST00000416538 TFDP1Q14186 410 aa16.76■□□□□ 0.27
UBXN4-203ENST00000416538 IL17AQ16552 155 aa16.76■□□□□ 0.27
UBXN4-203ENST00000416538 NOTUMQ6P988 496 aa16.76■□□□□ 0.27
UBXN4-203ENST00000416538 DDX53Q86TM3 631 aaKnown RBP16.76■□□□□ 0.27
UBXN4-203ENST00000416538 RNF135Q8IUD6 432 aa16.76■□□□□ 0.27
UBXN4-203ENST00000416538 GSTCDQ8NEC7 633 aa16.76■□□□□ 0.27
UBXN4-203ENST00000416538 RSPH1Q8WYR4 309 aa16.76■□□□□ 0.27
UBXN4-203ENST00000416538 TMX3Q96JJ7 454 aa16.76■□□□□ 0.27
UBXN4-203ENST00000416538 APOL6Q9BWW8 343 aa16.76■□□□□ 0.27
UBXN4-203ENST00000416538 CSRNP2Q9H175 543 aa16.76■□□□□ 0.27
UBXN4-203ENST00000416538 POLD4Q9HCU8 107 aa16.76■□□□□ 0.27
UBXN4-203ENST00000416538 USP20Q9Y2K6 914 aa16.76■□□□□ 0.27
UBXN4-203ENST00000416538 DOCK8Q8NF50 2099 aa16.75■□□□□ 0.27
UBXN4-203ENST00000416538 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.75■□□□□ 0.27
UBXN4-203ENST00000416538 LRRIQ4A6NIV6 560 aa16.75■□□□□ 0.27
UBXN4-203ENST00000416538 SCNN1GP51170 649 aa16.75■□□□□ 0.27
UBXN4-203ENST00000416538 DSC1Q08554 894 aa16.75■□□□□ 0.27
UBXN4-203ENST00000416538 PTPN14Q15678 1187 aa16.75■□□□□ 0.27
UBXN4-203ENST00000416538 PADI6Q6TGC4 694 aa16.75■□□□□ 0.27
UBXN4-203ENST00000416538 COLGALT2Q8IYK4 626 aa16.75■□□□□ 0.27
UBXN4-203ENST00000416538 URGCPQ8TCY9 931 aa16.75■□□□□ 0.27
UBXN4-203ENST00000416538 CCDC51Q96ER9 411 aa16.75■□□□□ 0.27
UBXN4-203ENST00000416538 POP1Q99575 1024 aaKnown RBP16.75■□□□□ 0.27
UBXN4-203ENST00000416538 KIFC3Q9BVG8 833 aa16.75■□□□□ 0.27
UBXN4-203ENST00000416538 CCDC113Q9H0I3 377 aa16.75■□□□□ 0.27
UBXN4-203ENST00000416538 CXCL16Q9H2A7 254 aa16.75■□□□□ 0.27
UBXN4-203ENST00000416538 FSD2A1L4K1 749 aa16.74■□□□□ 0.27
UBXN4-203ENST00000416538 ARL5CA6NH57 179 aa16.74■□□□□ 0.27
UBXN4-203ENST00000416538 NPTXRO95502 500 aa16.74■□□□□ 0.27
UBXN4-203ENST00000416538 EFEMP2O95967 443 aa16.74■□□□□ 0.27
UBXN4-203ENST00000416538 ITGA4P13612 1032 aa16.74■□□□□ 0.27
UBXN4-203ENST00000416538 EPCAMP16422 314 aa16.74■□□□□ 0.27
UBXN4-203ENST00000416538 AXLP30530 894 aa16.74■□□□□ 0.27
UBXN4-203ENST00000416538 PTGDRQ13258 359 aa16.74■□□□□ 0.27
UBXN4-203ENST00000416538 CBX2Q14781 532 aaPredicted RBP16.74■□□□□ 0.27
UBXN4-203ENST00000416538 PCBP1Q15365 356 aaKnown RBP eCLIP16.74■□□□□ 0.27
UBXN4-203ENST00000416538 KANK3Q6NY19 840 aa16.74■□□□□ 0.27
UBXN4-203ENST00000416538 RNF168Q8IYW5 571 aaPredicted RBP16.74■□□□□ 0.27
UBXN4-203ENST00000416538 IGSF22Q8N9C0 903 aa16.74■□□□□ 0.27
UBXN4-203ENST00000416538 MCPH1Q8NEM0 835 aa16.74■□□□□ 0.27
UBXN4-203ENST00000416538 NACC1Q96RE7 527 aa16.74■□□□□ 0.27
UBXN4-203ENST00000416538 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.74■□□□□ 0.27
UBXN4-203ENST00000416538 CACNG4Q9UBN1 327 aa16.74■□□□□ 0.27
UBXN4-203ENST00000416538 PRG3Q9Y2Y8 225 aaPredicted RBP16.74■□□□□ 0.27
UBXN4-203ENST00000416538 IRAK3Q9Y616 596 aa16.74■□□□□ 0.27
UBXN4-203ENST00000416538 ZDBF2Q9HCK1 2354 aa16.73■□□□□ 0.27
UBXN4-203ENST00000416538 NRP1O14786 923 aa16.73■□□□□ 0.27
UBXN4-203ENST00000416538 CXCL14O95715 111 aa16.73■□□□□ 0.27
UBXN4-203ENST00000416538 SSBP05455 408 aaKnown RBP eCLIP16.73■□□□□ 0.27
UBXN4-203ENST00000416538 WEE2P0C1S8 567 aa16.73■□□□□ 0.27
UBXN4-203ENST00000416538 CYP11B2P19099 503 aa16.73■□□□□ 0.27
UBXN4-203ENST00000416538 AKAP5P24588 427 aa16.73■□□□□ 0.27
UBXN4-203ENST00000416538 CA8P35219 290 aa16.73■□□□□ 0.27
UBXN4-203ENST00000416538 CCT6AP40227 531 aaKnown RBP16.73■□□□□ 0.27
UBXN4-203ENST00000416538 GNL2Q13823 731 aaKnown RBP16.73■□□□□ 0.27
UBXN4-203ENST00000416538 HERC4Q5GLZ8 1057 aaPredicted RBP16.73■□□□□ 0.27
UBXN4-203ENST00000416538 KCNK18Q7Z418 384 aa16.73■□□□□ 0.27
UBXN4-203ENST00000416538 C12orf76Q8N812 135 aaPredicted RBP16.73■□□□□ 0.27
UBXN4-203ENST00000416538 ERMNQ8TAM6 284 aa16.73■□□□□ 0.27
UBXN4-203ENST00000416538 SLC22A17Q8WUG5 538 aa16.73■□□□□ 0.27
UBXN4-203ENST00000416538 TMEM175Q9BSA9 504 aa16.73■□□□□ 0.27
UBXN4-203ENST00000416538 MMTAG2Q9BU76 263 aaKnown RBP16.73■□□□□ 0.27
UBXN4-203ENST00000416538 PHF7Q9BWX1 381 aaPredicted RBP16.73■□□□□ 0.27
UBXN4-203ENST00000416538 BHMT2Q9H2M3 363 aa16.73■□□□□ 0.27
UBXN4-203ENST00000416538 FZD8Q9H461 694 aa16.73■□□□□ 0.27
UBXN4-203ENST00000416538 PDZD7Q9H5P4 517 aa16.73■□□□□ 0.27
UBXN4-203ENST00000416538 NOL7Q9UMY1 257 aaKnown RBP16.73■□□□□ 0.27
UBXN4-203ENST00000416538 A0A1B0GUA9 196 aa16.72■□□□□ 0.27
UBXN4-203ENST00000416538 ARHGEF35A5YM69 484 aa16.72■□□□□ 0.27
UBXN4-203ENST00000416538 LILRB3O75022 631 aa16.72■□□□□ 0.27
UBXN4-203ENST00000416538 ALADP13716 330 aa16.72■□□□□ 0.27
UBXN4-203ENST00000416538 SP100P23497 879 aaPredicted RBP16.72■□□□□ 0.27
UBXN4-203ENST00000416538 CDC25AP30304 524 aa16.72■□□□□ 0.27
UBXN4-203ENST00000416538 FAM187BQ17R55 369 aa16.72■□□□□ 0.27
UBXN4-203ENST00000416538 EEF1DP3Q658K8 133 aa16.72■□□□□ 0.27
UBXN4-203ENST00000416538 HAUS3Q68CZ6 603 aa16.72■□□□□ 0.27
UBXN4-203ENST00000416538 TAS1R1Q7RTX1 841 aa16.72■□□□□ 0.27
UBXN4-203ENST00000416538 CNNM3Q8NE01 707 aa16.72■□□□□ 0.27
UBXN4-203ENST00000416538 SNX29Q8TEQ0 813 aa16.72■□□□□ 0.27
UBXN4-203ENST00000416538 CASP10Q92851 521 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms