RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 TMEM175Q9BSA9 504 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 TRAIPQ9BWF2 469 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 TEKT3Q9BXF9 490 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 EIF2AQ9BY44 585 aaKnown RBP10.5□□□□□ -0.73
LINC01238-201ENST00000416204 BCO2Q9BYV7 579 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 GLT8D2Q9H1C3 349 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 IFT122Q9HBG6 1241 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 C6orf50Q9HD87 102 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 PARD6AQ9NPB6 346 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 ANO2Q9NQ90 1003 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 AGPAT5Q9NUQ2 364 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 MIOSQ9NXC5 875 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 POLIQ9UNA4 740 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 SMG5Q9UPR3 1016 aaKnown RBP10.5□□□□□ -0.73
LINC01238-201ENST00000416204 MAP1BP46821 2468 aaKnown RBP10.5□□□□□ -0.73
LINC01238-201ENST00000416204 CHD6Q8TD26 2715 aa10.49□□□□□ -0.73
LINC01238-201ENST00000416204 IGKV6-21A0A0C4DH24 114 aa10.49□□□□□ -0.73
LINC01238-201ENST00000416204 KANSL1LA0AUZ9 987 aa10.49□□□□□ -0.73
LINC01238-201ENST00000416204 ARL5CA6NH57 179 aa10.49□□□□□ -0.73
LINC01238-201ENST00000416204 hCG_1984214I3L0E3 225 aa10.49□□□□□ -0.73
LINC01238-201ENST00000416204 HOXA11P31270 313 aaPredicted RBP10.49□□□□□ -0.73
LINC01238-201ENST00000416204 JAK3P52333 1124 aa10.49□□□□□ -0.73
LINC01238-201ENST00000416204 STARD6P59095 220 aa10.49□□□□□ -0.73
LINC01238-201ENST00000416204 MLF2Q15773 248 aaPredicted RBP10.49□□□□□ -0.73
LINC01238-201ENST00000416204 ADCK5Q3MIX3 580 aa10.49□□□□□ -0.73
LINC01238-201ENST00000416204 XKR3Q5GH77 459 aa10.49□□□□□ -0.73
LINC01238-201ENST00000416204 MRPL10Q7Z7H8 261 aaKnown RBP10.49□□□□□ -0.73
LINC01238-201ENST00000416204 ZNF410Q86VK4 478 aa10.49□□□□□ -0.73
LINC01238-201ENST00000416204 ZNF710Q8N1W2 664 aa10.49□□□□□ -0.73
LINC01238-201ENST00000416204 ZNF713Q8N859 430 aaPredicted RBP10.49□□□□□ -0.73
LINC01238-201ENST00000416204 SMG8Q8ND04 991 aaKnown RBP10.49□□□□□ -0.73
LINC01238-201ENST00000416204 ITFG1Q8TB96 612 aa10.49□□□□□ -0.73
LINC01238-201ENST00000416204 HASPINQ8TF76 798 aa10.49□□□□□ -0.73
LINC01238-201ENST00000416204 SLC5A5Q92911 643 aa10.49□□□□□ -0.73
LINC01238-201ENST00000416204 CPB2Q96IY4 423 aa10.49□□□□□ -0.73
LINC01238-201ENST00000416204 CHAMP1Q96JM3 812 aa10.49□□□□□ -0.73
LINC01238-201ENST00000416204 NIFKQ9BYG3 293 aaKnown RBP10.49□□□□□ -0.73
LINC01238-201ENST00000416204 GPR62Q9BZJ7 368 aa10.49□□□□□ -0.73
LINC01238-201ENST00000416204 PRKD2Q9BZL6 878 aa10.49□□□□□ -0.73
LINC01238-201ENST00000416204 INO80BQ9C086 356 aaPredicted RBP10.49□□□□□ -0.73
LINC01238-201ENST00000416204 SLC2A4RGQ9NR83 387 aa10.49□□□□□ -0.73
LINC01238-201ENST00000416204 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.49□□□□□ -0.73
LINC01238-201ENST00000416204 VPS54Q9P1Q0 977 aa10.49□□□□□ -0.73
LINC01238-201ENST00000416204 COL4A3BPQ9Y5P4 624 aa10.49□□□□□ -0.73
LINC01238-201ENST00000416204 DOCK8Q8NF50 2099 aa10.48□□□□□ -0.73
LINC01238-201ENST00000416204 FRYQ5TBA9 3013 aa10.48□□□□□ -0.73
LINC01238-201ENST00000416204 CCL16O15467 120 aa10.48□□□□□ -0.73
LINC01238-201ENST00000416204 MAFO75444 373 aaPredicted RBP10.48□□□□□ -0.73
LINC01238-201ENST00000416204 TDP2O95551 362 aa10.48□□□□□ -0.73
LINC01238-201ENST00000416204 ITGA4P13612 1032 aa10.48□□□□□ -0.73
LINC01238-201ENST00000416204 CIITAP33076 1130 aa10.48□□□□□ -0.73
LINC01238-201ENST00000416204 EXOSC10Q01780 885 aaKnown RBP10.48□□□□□ -0.73
LINC01238-201ENST00000416204 DSG1Q02413 1049 aa10.48□□□□□ -0.73
LINC01238-201ENST00000416204 NECTIN1Q15223 517 aa10.48□□□□□ -0.73
LINC01238-201ENST00000416204 SLC44A4Q53GD3 710 aa10.48□□□□□ -0.73
LINC01238-201ENST00000416204 ELMSAN1Q6PJG2 1045 aa10.48□□□□□ -0.73
LINC01238-201ENST00000416204 ANO5Q75V66 913 aa10.48□□□□□ -0.73
LINC01238-201ENST00000416204 CDR2LQ86X02 465 aaPredicted RBP10.48□□□□□ -0.73
LINC01238-201ENST00000416204 PRPF31Q8WWY3 499 aaKnown RBP10.48□□□□□ -0.73
LINC01238-201ENST00000416204 ING5Q8WYH8 240 aa10.48□□□□□ -0.73
LINC01238-201ENST00000416204 NXPE3Q969Y0 559 aa10.48□□□□□ -0.73
LINC01238-201ENST00000416204 ESYT1Q9BSJ8 1104 aa10.48□□□□□ -0.73
LINC01238-201ENST00000416204 ZMYND12Q9H0C1 365 aa10.48□□□□□ -0.73
LINC01238-201ENST00000416204 RXFP1Q9HBX9 757 aa10.48□□□□□ -0.73
LINC01238-201ENST00000416204 HCFC1R1Q9NWW0 138 aa10.48□□□□□ -0.73
LINC01238-201ENST00000416204 KLK14Q9P0G3 267 aa10.48□□□□□ -0.73
LINC01238-201ENST00000416204 KANSL3Q9P2N6 904 aa10.48□□□□□ -0.73
LINC01238-201ENST00000416204 IPPQ9Y573 584 aa10.48□□□□□ -0.73
LINC01238-201ENST00000416204 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.48□□□□□ -0.73
LINC01238-201ENST00000416204 USP24Q9UPU5 2620 aa10.48□□□□□ -0.73
LINC01238-201ENST00000416204 CARNS1A5YM72 827 aa10.47□□□□□ -0.73
LINC01238-201ENST00000416204 SPTLC1O15269 473 aa10.47□□□□□ -0.73
LINC01238-201ENST00000416204 PSMD10O75832 226 aa10.47□□□□□ -0.73
LINC01238-201ENST00000416204 NCLP19338 710 aaKnown RBP10.47□□□□□ -0.73
LINC01238-201ENST00000416204 TGM1P22735 817 aa10.47□□□□□ -0.73
LINC01238-201ENST00000416204 AKAP5P24588 427 aa10.47□□□□□ -0.73
LINC01238-201ENST00000416204 TARSP26639 723 aaKnown RBP10.47□□□□□ -0.73
LINC01238-201ENST00000416204 SFNP31947 248 aa10.47□□□□□ -0.73
LINC01238-201ENST00000416204 SPEM2Q0P670 501 aa10.47□□□□□ -0.73
LINC01238-201ENST00000416204 LAMTOR4Q0VGL1 99 aa10.47□□□□□ -0.73
LINC01238-201ENST00000416204 AAMPQ13685 434 aa10.47□□□□□ -0.73
LINC01238-201ENST00000416204 FUT10Q6P4F1 479 aa10.47□□□□□ -0.73
LINC01238-201ENST00000416204 TPRG1Q6ZUI0 275 aa10.47□□□□□ -0.73
LINC01238-201ENST00000416204 RNF168Q8IYW5 571 aaPredicted RBP10.47□□□□□ -0.73
LINC01238-201ENST00000416204 RASEFQ8IZ41 740 aa10.47□□□□□ -0.73
LINC01238-201ENST00000416204 FGF13Q92913 245 aa10.47□□□□□ -0.73
LINC01238-201ENST00000416204 SHDQ96IW2 340 aa10.47□□□□□ -0.73
LINC01238-201ENST00000416204 RIT2Q99578 217 aa10.47□□□□□ -0.73
LINC01238-201ENST00000416204 PAAF1Q9BRP4 392 aa10.47□□□□□ -0.73
LINC01238-201ENST00000416204 LTB4R2Q9NPC1 389 aa10.47□□□□□ -0.73
LINC01238-201ENST00000416204 DPP7Q9UHL4 492 aa10.47□□□□□ -0.73
LINC01238-201ENST00000416204 CDH7Q9ULB5 785 aa10.47□□□□□ -0.73
LINC01238-201ENST00000416204 SSX2IPQ9Y2D8 614 aa10.47□□□□□ -0.73
LINC01238-201ENST00000416204 PCDHGA2Q9Y5H1 932 aa10.47□□□□□ -0.73
LINC01238-201ENST00000416204 CNTNAP2Q9UHC6 1331 aa10.47□□□□□ -0.73
LINC01238-201ENST00000416204 FANCMQ8IYD8 2048 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 ESYT2A0FGR8 921 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 EML1O00423 815 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 ADAM12O43184 909 aa10.46□□□□□ -0.73
LINC01238-201ENST00000416204 ZMYND10O75800 440 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms