RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 CCL15-CCL14A0A0B4J2E2 113 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 SMIM24O75264 130 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 HADHAP40939 763 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 CCL15Q16663 113 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 C16orf86Q6ZW13 317 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 RAPGEF5Q92565 580 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 VPS11Q9H270 941 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 ORC6Q9Y5N6 252 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 KPNA2P52292 529 aaKnown RBP11.3□□□□□ -0.6
COL12A1-203ENST00000416123 TAF1BQ53T94 588 aaPredicted RBP11.3□□□□□ -0.6
COL12A1-203ENST00000416123 BTBD8Q5XKL5 378 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 DEFB129Q9H1M3 183 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 TUFT1Q9NNX1 390 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 IP6K2Q9UHH9 426 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 PTPRMP28827 1452 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 NNMTP40261 264 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 KCNA1Q09470 495 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 ZC2HC1CQ53FD0 456 aaPredicted RBP11.3□□□□□ -0.6
COL12A1-203ENST00000416123 SNX19Q92543 992 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 REEP2Q9BRK0 252 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 SEL1LQ9UBV2 794 aa11.3□□□□□ -0.6
COL12A1-203ENST00000416123 C2CD2LO14523 706 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 HSPA4LO95757 839 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 TMEM106CQ9BVX2 250 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 PLA2G12BQ9BX93 195 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 VCX3AQ9NNX9 186 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 AGAP1Q9UPQ3 857 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 SULT1E1P49888 294 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 HEATR6Q6AI08 1181 aaKnown RBP11.29□□□□□ -0.6
COL12A1-203ENST00000416123 N4BP2L2Q92802 583 aaPredicted RBP11.29□□□□□ -0.6
COL12A1-203ENST00000416123 GRAP2O75791 330 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 APBA1Q02410 837 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 HIPK4Q8NE63 616 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 MS4A14Q96JA4 679 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 TEX13BQ9BXU2 312 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 ZFYVE28Q9HCC9 887 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 SPATA31A5Q5VU36 1347 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 SPATA31A6Q5VVP1 1343 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 SPATA31A7Q8IWB4 1347 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 KDM6AO15550 1401 aaPredicted RBP11.29□□□□□ -0.6
COL12A1-203ENST00000416123 SPECC1L-ADORA2AF8WAN1 911 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 HSPA6P17066 643 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 ROR1Q01973 937 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 DEFB132Q7Z7B7 95 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 HAUS8Q9BT25 410 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 EDEM3Q9BZQ6 932 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 HSPBP1Q9NZL4 362 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 PPFIA2O75334 1257 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 IMPG1Q17R60 797 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 NDFIP2Q9NV92 336 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 NTSR2O95665 410 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 EYA4O95677 639 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 NR1D1P20393 614 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 NUMBP49757 651 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 CDH6P55285 790 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 CASP8Q14790 479 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 RBBP7Q16576 425 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 WDR72Q3MJ13 1102 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 EFCAB12Q6NXP0 572 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 WHAMMQ8TF30 809 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 ASIC4Q96FT7 647 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 OSBPL9Q96SU4 736 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 PPLO60437 1756 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 A0A0G2JND7 137 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 TTC26A0AVF1 554 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 CLCN6P51797 869 aa11.29□□□□□ -0.6
COL12A1-203ENST00000416123 RABL6Q3YEC7 729 aaPredicted RBP11.29□□□□□ -0.6
COL12A1-203ENST00000416123 RASA4BC9J798 803 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 RASA4O43374 803 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 ARL4CP56559 192 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 EFHC2Q5JST6 749 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 TRMT10CQ7L0Y3 403 aaKnown RBP11.28□□□□□ -0.6
COL12A1-203ENST00000416123 TAS2R42Q7RTR8 314 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 AGR3Q8TD06 166 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 AGAP3Q96P47 875 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 PARVAQ9NVD7 372 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 TJP2Q9UDY2 1190 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 PODXLO00592 558 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 DNAJC6O75061 913 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 KCNJ6P48051 423 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 TMPRSS15P98073 1019 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 SF3B3Q15393 1217 aaKnown RBP11.28□□□□□ -0.6
COL12A1-203ENST00000416123 C6orf118Q5T5N4 469 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 FBXO2Q9UK22 296 aaPredicted RBP11.28□□□□□ -0.6
COL12A1-203ENST00000416123 STXBP3O00186 592 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 TMEM132DQ14C87 1099 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 SNCBQ16143 134 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 EPM2AIP1Q7L775 607 aaPredicted RBP11.28□□□□□ -0.6
COL12A1-203ENST00000416123 CRLF3Q8IUI8 442 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 YAF2Q8IY57 180 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 PDCD7Q8N8D1 485 aaKnown RBP11.28□□□□□ -0.6
COL12A1-203ENST00000416123 SNX9Q9Y5X1 595 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 DLC1Q96QB1 1528 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 COPEO14579 308 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 ATP9BO43861 1147 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 TRPA1O75762 1119 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 CHEK2O96017 543 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 Q9H521 79 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 SMYD3Q9H7B4 428 aa11.28□□□□□ -0.6
COL12A1-203ENST00000416123 ZC3H4Q9UPT8 1303 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms