RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 TRIML1Q8N9V2 468 aa15.91■□□□□ 0.14
SGCE-202ENST00000415788 TMEM40Q8WWA1 233 aa15.91■□□□□ 0.14
SGCE-202ENST00000415788 KIFC3Q9BVG8 833 aa15.91■□□□□ 0.14
SGCE-202ENST00000415788 PRMT7Q9NVM4 692 aaPredicted RBP15.91■□□□□ 0.14
SGCE-202ENST00000415788 EVPLQ92817 2033 aa15.9■□□□□ 0.14
SGCE-202ENST00000415788 DENND3A2RUS2 1198 aa15.9■□□□□ 0.14
SGCE-202ENST00000415788 EIF3DO15371 548 aaKnown RBP eCLIP15.9■□□□□ 0.14
SGCE-202ENST00000415788 GCNT3O95395 438 aa15.9■□□□□ 0.14
SGCE-202ENST00000415788 PFKMP08237 780 aa15.9■□□□□ 0.14
SGCE-202ENST00000415788 GHRP10912 638 aa15.9■□□□□ 0.14
SGCE-202ENST00000415788 GTF2BQ00403 316 aa15.9■□□□□ 0.14
SGCE-202ENST00000415788 STRN3Q13033 797 aa15.9■□□□□ 0.14
SGCE-202ENST00000415788 LPIN1Q14693 890 aa15.9■□□□□ 0.14
SGCE-202ENST00000415788 PPP4R3CPQ6ZMV5 832 aa15.9■□□□□ 0.14
SGCE-202ENST00000415788 CCDC113Q9H0I3 377 aa15.9■□□□□ 0.14
SGCE-202ENST00000415788 FZD8Q9H461 694 aa15.9■□□□□ 0.14
SGCE-202ENST00000415788 CALCOCO1Q9P1Z2 691 aa15.9■□□□□ 0.14
SGCE-202ENST00000415788 ERLIN2O94905 339 aa15.89■□□□□ 0.13
SGCE-202ENST00000415788 CXCL10P02778 98 aa15.89■□□□□ 0.13
SGCE-202ENST00000415788 H2AFXP16104 143 aaPredicted RBP15.89■□□□□ 0.13
SGCE-202ENST00000415788 NMT1P30419 496 aaKnown RBP15.89■□□□□ 0.13
SGCE-202ENST00000415788 PAK2Q13177 524 aa15.89■□□□□ 0.13
SGCE-202ENST00000415788 MBTPS1Q14703 1052 aa15.89■□□□□ 0.13
SGCE-202ENST00000415788 ELF2Q15723 593 aa15.89■□□□□ 0.13
SGCE-202ENST00000415788 FILIP1Q7Z7B0 1213 aa15.89■□□□□ 0.13
SGCE-202ENST00000415788 ERCC4Q92889 916 aaPredicted RBP15.89■□□□□ 0.13
SGCE-202ENST00000415788 SCLYQ96I15 445 aa15.89■□□□□ 0.13
SGCE-202ENST00000415788 MINDY3Q9H8M7 445 aa15.89■□□□□ 0.13
SGCE-202ENST00000415788 TBC1D7Q9P0N9 293 aa15.89■□□□□ 0.13
SGCE-202ENST00000415788 NOC2LQ9Y3T9 749 aaKnown RBP15.89■□□□□ 0.13
SGCE-202ENST00000415788 UBE4BO95155 1302 aa15.89■□□□□ 0.13
SGCE-202ENST00000415788 ACKR2O00590 384 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 NBNO60934 754 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 PPP1R37O75864 691 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 ITGB8P26012 769 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 AXLP30530 894 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 TPM4P67936 248 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 ARID5BQ14865 1188 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 ZNF658Q5TYW1 1059 aaPredicted RBP15.88■□□□□ 0.13
SGCE-202ENST00000415788 CATSPER4Q7RTX7 472 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 FAM228AQ86W67 206 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 RPUSD2Q8IZ73 545 aaKnown RBP15.88■□□□□ 0.13
SGCE-202ENST00000415788 APBB2Q92870 758 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 STRA6Q9BX79 667 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 IFIH1Q9BYX4 1025 aaKnown RBP15.88■□□□□ 0.13
SGCE-202ENST00000415788 MAN1B1Q9UKM7 699 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 TBX20Q9UMR3 447 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 EXOC7Q9UPT5 735 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 PRKCBP05771 671 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 STK4Q13043 487 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 PPIGQ13427 754 aaKnown RBP eCLIP15.88■□□□□ 0.13
SGCE-202ENST00000415788 MAP4K3Q8IVH8 894 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 SEPT8Q92599 483 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 HPS3Q969F9 1004 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 LBHD1Q9BQE6 289 aaPredicted RBP15.88■□□□□ 0.13
SGCE-202ENST00000415788 TMEM206Q9H813 350 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 AGO3Q9H9G7 860 aaKnown RBP15.88■□□□□ 0.13
SGCE-202ENST00000415788 ERVK-5Q9HDB9 667 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 SLC39A2Q9NP94 309 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 PADI3Q9ULW8 664 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 ST3GAL5Q9UNP4 418 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 ALPK3Q96L96 1907 aa15.88■□□□□ 0.13
SGCE-202ENST00000415788 CD52P31358 61 aa15.87■□□□□ 0.13
SGCE-202ENST00000415788 PPP1R2P41236 205 aa15.87■□□□□ 0.13
SGCE-202ENST00000415788 NFX1Q12986 1120 aaKnown RBP15.87■□□□□ 0.13
SGCE-202ENST00000415788 PRPF4BQ13523 1007 aaKnown RBP15.87■□□□□ 0.13
SGCE-202ENST00000415788 GPNMBQ14956 572 aa15.87■□□□□ 0.13
SGCE-202ENST00000415788 PLEKHG4Q58EX7 1191 aa15.87■□□□□ 0.13
SGCE-202ENST00000415788 EPM2AIP1Q7L775 607 aaPredicted RBP15.87■□□□□ 0.13
SGCE-202ENST00000415788 KIAA0895Q8NCT3 520 aa15.87■□□□□ 0.13
SGCE-202ENST00000415788 ACCSQ96QU6 501 aa15.87■□□□□ 0.13
SGCE-202ENST00000415788 FTHL17Q9BXU8 183 aa15.87■□□□□ 0.13
SGCE-202ENST00000415788 MRPL4Q9BYD3 311 aaKnown RBP15.87■□□□□ 0.13
SGCE-202ENST00000415788 CHST12Q9NRB3 414 aa15.87■□□□□ 0.13
SGCE-202ENST00000415788 TRMT1Q9NXH9 659 aaKnown RBP15.87■□□□□ 0.13
SGCE-202ENST00000415788 CNTNAP2Q9UHC6 1331 aa15.87■□□□□ 0.13
SGCE-202ENST00000415788 TANC1Q9C0D5 1861 aa15.86■□□□□ 0.13
SGCE-202ENST00000415788 TSPAN1O60635 241 aa15.86■□□□□ 0.13
SGCE-202ENST00000415788 CSDE1O75534 798 aaKnown RBP15.86■□□□□ 0.13
SGCE-202ENST00000415788 MYBP10242 640 aa15.86■□□□□ 0.13
SGCE-202ENST00000415788 CSF2RAP15509 400 aa15.86■□□□□ 0.13
SGCE-202ENST00000415788 CASP5P51878 434 aa15.86■□□□□ 0.13
SGCE-202ENST00000415788 FPGSQ05932 587 aa15.86■□□□□ 0.13
SGCE-202ENST00000415788 MORC3Q14149 939 aa15.86■□□□□ 0.13
SGCE-202ENST00000415788 AMHR2Q16671 573 aa15.86■□□□□ 0.13
SGCE-202ENST00000415788 BMT2Q1RMZ1 405 aa15.86■□□□□ 0.13
SGCE-202ENST00000415788 ZC2HC1CQ53FD0 456 aaPredicted RBP15.86■□□□□ 0.13
SGCE-202ENST00000415788 COBLL1Q53SF7 1204 aa15.86■□□□□ 0.13
SGCE-202ENST00000415788 ZPBP2Q6X784 338 aa15.86■□□□□ 0.13
SGCE-202ENST00000415788 TAS1R3Q7RTX0 852 aa15.86■□□□□ 0.13
SGCE-202ENST00000415788 MYOCDQ8IZQ8 938 aa15.86■□□□□ 0.13
SGCE-202ENST00000415788 AOPEPQ8N6M6 819 aa15.86■□□□□ 0.13
SGCE-202ENST00000415788 ZNF507Q8TCN5 953 aa15.86■□□□□ 0.13
SGCE-202ENST00000415788 BADQ92934 168 aa15.86■□□□□ 0.13
SGCE-202ENST00000415788 AGPAT5Q9NUQ2 364 aa15.86■□□□□ 0.13
SGCE-202ENST00000415788 ZMYND8Q9ULU4 1186 aaPredicted RBP15.86■□□□□ 0.13
SGCE-202ENST00000415788 PIGRP01833 764 aa15.86■□□□□ 0.13
SGCE-202ENST00000415788 SYN1P17600 705 aa15.86■□□□□ 0.13
SGCE-202ENST00000415788 NOTUMQ6P988 496 aa15.86■□□□□ 0.13
SGCE-202ENST00000415788 CNKSR3Q6P9H4 555 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms