RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 ANKRD6Q9Y2G4 727 aa7.38□□□□□ -1.23
EPHA4-204ENST00000415749 YBX2Q9Y2T7 364 aaKnown RBP7.38□□□□□ -1.23
EPHA4-204ENST00000415749 PCDHA8Q9Y5H6 950 aa7.38□□□□□ -1.23
EPHA4-204ENST00000415749 FKBP9O95302 570 aa7.37□□□□□ -1.23
EPHA4-204ENST00000415749 HMOX1P09601 288 aa7.37□□□□□ -1.23
EPHA4-204ENST00000415749 MSL3P1P0C860 447 aa7.37□□□□□ -1.23
EPHA4-204ENST00000415749 TACR1P25103 407 aa7.37□□□□□ -1.23
EPHA4-204ENST00000415749 PIP4K2AP48426 406 aaPredicted RBP7.37□□□□□ -1.23
EPHA4-204ENST00000415749 IRAK1P51617 712 aa7.37□□□□□ -1.23
EPHA4-204ENST00000415749 TEFQ10587 303 aa7.37□□□□□ -1.23
EPHA4-204ENST00000415749 ATP13A4Q4VNC1 1196 aa7.37□□□□□ -1.23
EPHA4-204ENST00000415749 DLK2Q6UY11 383 aa7.37□□□□□ -1.23
EPHA4-204ENST00000415749 FKBP9P1Q75LS8 142 aa7.37□□□□□ -1.23
EPHA4-204ENST00000415749 DDX53Q86TM3 631 aaKnown RBP7.37□□□□□ -1.23
EPHA4-204ENST00000415749 NLRP10Q86W26 655 aa7.37□□□□□ -1.23
EPHA4-204ENST00000415749 ZSWIM9Q86XI8 627 aa7.37□□□□□ -1.23
EPHA4-204ENST00000415749 KIF18BQ86Y91 864 aa7.37□□□□□ -1.23
EPHA4-204ENST00000415749 RIOX2Q8IUF8 465 aa7.37□□□□□ -1.23
EPHA4-204ENST00000415749 IL17REQ8NFR9 667 aa7.37□□□□□ -1.23
EPHA4-204ENST00000415749 PLEKHO2Q8TD55 490 aa7.37□□□□□ -1.23
EPHA4-204ENST00000415749 SHISA4Q96DD7 197 aa7.37□□□□□ -1.23
EPHA4-204ENST00000415749 CLIP3Q96DZ5 547 aa7.37□□□□□ -1.23
EPHA4-204ENST00000415749 VPS33BQ9H267 617 aa7.37□□□□□ -1.23
EPHA4-204ENST00000415749 EPB41L1Q9H4G0 881 aa7.37□□□□□ -1.23
EPHA4-204ENST00000415749 GBA2Q9HCG7 927 aaPredicted RBP7.37□□□□□ -1.23
EPHA4-204ENST00000415749 CNOT7Q9UIV1 285 aaKnown RBP7.37□□□□□ -1.23
EPHA4-204ENST00000415749 PNMA8BQ9ULN7 279 aaPredicted RBP7.37□□□□□ -1.23
EPHA4-204ENST00000415749 USP16Q9Y5T5 823 aa7.37□□□□□ -1.23
EPHA4-204ENST00000415749 X6R8D5 127 aa7.37□□□□□ -1.23
EPHA4-204ENST00000415749 ARFGEF2Q9Y6D5 1785 aa7.37□□□□□ -1.23
EPHA4-204ENST00000415749 NPC1L1Q9UHC9 1359 aa7.36□□□□□ -1.23
EPHA4-204ENST00000415749 H7C1D1 291 aa7.36□□□□□ -1.23
EPHA4-204ENST00000415749 PPP1R11O60927 126 aaPredicted RBP7.36□□□□□ -1.23
EPHA4-204ENST00000415749 DGKIO75912 1065 aa7.36□□□□□ -1.23
EPHA4-204ENST00000415749 GLI1P08151 1106 aa7.36□□□□□ -1.23
EPHA4-204ENST00000415749 JUNBP17275 347 aaPredicted RBP7.36□□□□□ -1.23
EPHA4-204ENST00000415749 FPR2P25090 351 aa7.36□□□□□ -1.23
EPHA4-204ENST00000415749 FXR1P51114 621 aaKnown RBP eCLIP7.36□□□□□ -1.23
EPHA4-204ENST00000415749 TMEM62Q0P6H9 643 aa7.36□□□□□ -1.23
EPHA4-204ENST00000415749 RAPGEF1Q13905 1077 aa7.36□□□□□ -1.23
EPHA4-204ENST00000415749 PCBP2Q15366 365 aaKnown RBP eCLIP7.36□□□□□ -1.23
EPHA4-204ENST00000415749 CRY2Q49AN0 593 aa7.36□□□□□ -1.23
EPHA4-204ENST00000415749 COBLL1Q53SF7 1204 aa7.36□□□□□ -1.23
EPHA4-204ENST00000415749 INO80DQ53TQ3 878 aaPredicted RBP7.36□□□□□ -1.23
EPHA4-204ENST00000415749 ABHD17CQ6PCB6 329 aa7.36□□□□□ -1.23
EPHA4-204ENST00000415749 DCP2Q8IU60 420 aaKnown RBP7.36□□□□□ -1.23
EPHA4-204ENST00000415749 SIRT2Q8IXJ6 389 aa7.36□□□□□ -1.23
EPHA4-204ENST00000415749 CPA6Q8N4T0 437 aa7.36□□□□□ -1.23
EPHA4-204ENST00000415749 NETO2Q8NC67 525 aa7.36□□□□□ -1.23
EPHA4-204ENST00000415749 RPGRQ92834 1020 aaKnown RBP7.36□□□□□ -1.23
EPHA4-204ENST00000415749 FBXW5Q969U6 566 aa7.36□□□□□ -1.23
EPHA4-204ENST00000415749 ORAI3Q9BRQ5 295 aa7.36□□□□□ -1.23
EPHA4-204ENST00000415749 SLC13A1Q9BZW2 595 aa7.36□□□□□ -1.23
EPHA4-204ENST00000415749 TMX4Q9H1E5 349 aaPredicted RBP7.36□□□□□ -1.23
EPHA4-204ENST00000415749 TCF7L1Q9HCS4 588 aa7.36□□□□□ -1.23
EPHA4-204ENST00000415749 VTA1Q9NP79 307 aa7.36□□□□□ -1.23
EPHA4-204ENST00000415749 FBXL7Q9UJT9 491 aa7.36□□□□□ -1.23
EPHA4-204ENST00000415749 RCAN3Q9UKA8 241 aa7.36□□□□□ -1.23
EPHA4-204ENST00000415749 NUDT5Q9UKK9 219 aa7.36□□□□□ -1.23
EPHA4-204ENST00000415749 FAM50BQ9Y247 325 aa7.36□□□□□ -1.23
EPHA4-204ENST00000415749 SNED1Q8TER0 1413 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 COL4A5P29400 1685 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 CBX4O00257 560 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 WNT9AO14904 365 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 SRGAP3O43295 1099 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 KCNQ3O43525 872 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 RAD17O75943 681 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 GLRX3O76003 335 aaKnown RBP7.35□□□□□ -1.23
EPHA4-204ENST00000415749 CYBBP04839 570 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 MPOP05164 745 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 CYP2C19P33261 490 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 ERVFRD-1P60508 538 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 SPIRE1Q08AE8 756 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 GRM3Q14832 879 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 KIR3DS1Q14943 382 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 TNIP1Q15025 636 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 INAVAQ3KP66 663 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 ARHGAP29Q52LW3 1261 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 FYB2Q5VWT5 728 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 NME8Q8N427 588 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 PCDH19Q8TAB3 1148 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 INTS4Q96HW7 963 aaKnown RBP7.35□□□□□ -1.23
EPHA4-204ENST00000415749 RBM17Q96I25 401 aaKnown RBP7.35□□□□□ -1.23
EPHA4-204ENST00000415749 LRGUKQ96M69 825 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 CRAMP1Q96RY5 1269 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 NYXQ9GZU5 481 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 IPPKQ9H8X2 491 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 PANK3Q9H999 370 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 TNFRSF12AQ9NP84 129 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 GIT1Q9Y2X7 761 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 NUB1Q9Y5A7 615 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 MRC1P22897 1456 aa7.35□□□□□ -1.23
EPHA4-204ENST00000415749 FRMPD2Q68DX3 1309 aaPredicted RBP7.34□□□□□ -1.23
EPHA4-204ENST00000415749 K7ESF4 209 aa7.34□□□□□ -1.23
EPHA4-204ENST00000415749 KRIT1O00522 736 aa7.34□□□□□ -1.23
EPHA4-204ENST00000415749 APAF1O14727 1248 aa7.34□□□□□ -1.23
EPHA4-204ENST00000415749 TBX3O15119 743 aa7.34□□□□□ -1.23
EPHA4-204ENST00000415749 MAFKO60675 156 aa7.34□□□□□ -1.23
EPHA4-204ENST00000415749 GAS7O60861 476 aa7.34□□□□□ -1.23
EPHA4-204ENST00000415749 SRGAP2CP0DJJ0 459 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms