RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 CEP120Q8N960 986 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 U2AF1L4Q8WU68 220 aaKnown RBP12.32□□□□□ -0.44
LINC00330-201ENST00000414562 ST6GALNAC4Q9H4F1 302 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 C17orf75Q9HAS0 396 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 EXOC7Q9UPT5 735 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 PPP2R2CQ9Y2T4 447 aa12.32□□□□□ -0.44
LINC00330-201ENST00000414562 ADGRA3Q8IWK6 1321 aa12.31□□□□□ -0.44
LINC00330-201ENST00000414562 A0A1W2PQJ5 194 aa12.31□□□□□ -0.44
LINC00330-201ENST00000414562 EXOC3O60645 756 aa12.31□□□□□ -0.44
LINC00330-201ENST00000414562 SGPL1O95470 568 aa12.31□□□□□ -0.44
LINC00330-201ENST00000414562 AFPP02771 609 aaKnown RBP12.31□□□□□ -0.44
LINC00330-201ENST00000414562 GTF2BQ00403 316 aa12.31□□□□□ -0.44
LINC00330-201ENST00000414562 PPFIA1Q13136 1202 aa12.31□□□□□ -0.44
LINC00330-201ENST00000414562 MTHFD1LQ6UB35 978 aa12.31□□□□□ -0.44
LINC00330-201ENST00000414562 DNAJC7Q99615 494 aa12.31□□□□□ -0.44
LINC00330-201ENST00000414562 CRACR2AQ9BSW2 395 aa12.31□□□□□ -0.44
LINC00330-201ENST00000414562 KIFC3Q9BVG8 833 aa12.31□□□□□ -0.44
LINC00330-201ENST00000414562 LSM14BQ9BX40 385 aaKnown RBP12.31□□□□□ -0.44
LINC00330-201ENST00000414562 OSBPL7Q9BZF2 842 aa12.31□□□□□ -0.44
LINC00330-201ENST00000414562 TTYH3Q9C0H2 523 aa12.31□□□□□ -0.44
LINC00330-201ENST00000414562 POLR3FQ9H1D9 316 aaPredicted RBP12.31□□□□□ -0.44
LINC00330-201ENST00000414562 AGPAT5Q9NUQ2 364 aa12.31□□□□□ -0.44
LINC00330-201ENST00000414562 CGNQ9P2M7 1197 aaKnown RBP12.31□□□□□ -0.44
LINC00330-201ENST00000414562 A0A1W2PQ45 241 aaPredicted RBP12.3□□□□□ -0.44
LINC00330-201ENST00000414562 A0A1W2PQY0 241 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 KIF2AO00139 706 aaPredicted RBP12.3□□□□□ -0.44
LINC00330-201ENST00000414562 MSCO60682 206 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 CCDC175P0C221 793 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 ARL2P36404 184 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 MTF1Q14872 753 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 CACNA2D4Q7Z3S7 1137 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 RNF180Q86T96 592 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 SPIRE2Q8WWL2 714 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 SLC7A3Q8WY07 619 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 HVCN1Q96D96 273 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 FAM167AQ96KS9 214 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 DESI2Q9BSY9 194 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 MKNK1Q9BUB5 465 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 SPC25Q9HBM1 224 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 ZNF215Q9UL58 517 aaPredicted RBP12.3□□□□□ -0.44
LINC00330-201ENST00000414562 PHF24Q9UPV7 400 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 USP20Q9Y2K6 914 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 DENND3A2RUS2 1198 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 MBLAC1A4D2B0 266 aaPredicted RBP12.3□□□□□ -0.44
LINC00330-201ENST00000414562 H0YCG3 227 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 EDN1P05305 212 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 FECHP22830 423 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 GLRA2P23416 452 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 RTP1P59025 263 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 MYBPC2Q14324 1141 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 ZNF484Q5JVG2 852 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 RAD9BQ6WBX8 426 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 SLC9A9Q8IVB4 645 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 KIAA0319LQ8IZA0 1049 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 TMEM161BQ8NDZ6 487 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 MAP7D2Q96T17 732 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 PCIF1Q9H4Z3 704 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 SUGCTQ9HAC7 445 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 CDHR5Q9HBB8 845 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 DMAC2Q9NW81 257 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 TBX20Q9UMR3 447 aa12.3□□□□□ -0.44
LINC00330-201ENST00000414562 GOLGA6L9A6NEM1 432 aa12.29□□□□□ -0.44
LINC00330-201ENST00000414562 KRT13P13646 458 aa12.29□□□□□ -0.44
LINC00330-201ENST00000414562 RFC5P40937 340 aa12.29□□□□□ -0.44
LINC00330-201ENST00000414562 SNRPFP62306 86 aaKnown RBP12.29□□□□□ -0.44
LINC00330-201ENST00000414562 KCNMA1Q12791 1236 aa12.29□□□□□ -0.44
LINC00330-201ENST00000414562 COL13A1Q5TAT6 717 aaPredicted RBP12.29□□□□□ -0.44
LINC00330-201ENST00000414562 TAF3Q5VWG9 929 aa12.29□□□□□ -0.44
LINC00330-201ENST00000414562 EFCAB12Q6NXP0 572 aa12.29□□□□□ -0.44
LINC00330-201ENST00000414562 NYAP1Q6ZVC0 841 aa12.29□□□□□ -0.44
LINC00330-201ENST00000414562 TAS1R3Q7RTX0 852 aa12.29□□□□□ -0.44
LINC00330-201ENST00000414562 SLC43A3Q8NBI5 491 aa12.29□□□□□ -0.44
LINC00330-201ENST00000414562 PRPF31Q8WWY3 499 aaKnown RBP12.29□□□□□ -0.44
LINC00330-201ENST00000414562 PPP1R16BQ96T49 567 aa12.29□□□□□ -0.44
LINC00330-201ENST00000414562 TSEN34Q9BSV6 310 aaKnown RBP12.29□□□□□ -0.44
LINC00330-201ENST00000414562 EDEM3Q9BZQ6 932 aa12.29□□□□□ -0.44
LINC00330-201ENST00000414562 TRMT13Q9NUP7 481 aaKnown RBP12.29□□□□□ -0.44
LINC00330-201ENST00000414562 GTF2IRD1Q9UHL9 959 aa12.29□□□□□ -0.44
LINC00330-201ENST00000414562 KPNA6O60684 536 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 GJA8P48165 433 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 ITGA7Q13683 1181 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 PPP2R5AQ15172 486 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 BRDTQ58F21 947 aaPredicted RBP12.28□□□□□ -0.44
LINC00330-201ENST00000414562 RRAGAQ7L523 313 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 RDH13Q8NBN7 331 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 PCSK9Q8NBP7 692 aaKnown RBP12.28□□□□□ -0.44
LINC00330-201ENST00000414562 ARRDC4Q8NCT1 418 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 DHX38Q92620 1227 aaKnown RBP12.28□□□□□ -0.44
LINC00330-201ENST00000414562 BICD1Q96G01 975 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 CHP1Q99653 195 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 NTPCRQ9BSD7 190 aaKnown RBP12.28□□□□□ -0.44
LINC00330-201ENST00000414562 TRPV6Q9H1D0 765 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 SIP14410 1827 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 COL1A2P08123 1366 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 TTLL13PA6NNM8 815 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 TISP43B9A030 160 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 DNM1LO00429 736 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 EPHB6O15197 1021 aa12.28□□□□□ -0.44
LINC00330-201ENST00000414562 CSDE1O75534 798 aaKnown RBP12.28□□□□□ -0.44
LINC00330-201ENST00000414562 TFRCP02786 760 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms