RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 RASSF8Q8NHQ8 419 aa18.7■□□□□ 0.58
SCAMP4-204ENST00000414057 PRPF31Q8WWY3 499 aaKnown RBP18.7■□□□□ 0.58
SCAMP4-204ENST00000414057 DHX58Q96C10 678 aa18.7■□□□□ 0.58
SCAMP4-204ENST00000414057 CCDC43Q96MW1 224 aaKnown RBP18.7■□□□□ 0.58
SCAMP4-204ENST00000414057 POP1Q99575 1024 aaKnown RBP18.7■□□□□ 0.58
SCAMP4-204ENST00000414057 SERTAD1Q9UHV2 236 aa18.7■□□□□ 0.58
SCAMP4-204ENST00000414057 CD207Q9UJ71 328 aa18.7■□□□□ 0.58
SCAMP4-204ENST00000414057 MYL1P05976 194 aa18.69■□□□□ 0.58
SCAMP4-204ENST00000414057 SRGAP2BP0DMP2 458 aa18.69■□□□□ 0.58
SCAMP4-204ENST00000414057 CYP4A11Q02928 519 aa18.69■□□□□ 0.58
SCAMP4-204ENST00000414057 TYRO3Q06418 890 aa18.69■□□□□ 0.58
SCAMP4-204ENST00000414057 SMAD4Q13485 552 aaKnown RBP18.69■□□□□ 0.58
SCAMP4-204ENST00000414057 CTTNQ14247 550 aaKnown RBP18.69■□□□□ 0.58
SCAMP4-204ENST00000414057 BMS1Q14692 1282 aaKnown RBP18.69■□□□□ 0.58
SCAMP4-204ENST00000414057 POSTNQ15063 836 aa18.69■□□□□ 0.58
SCAMP4-204ENST00000414057 RRAGBQ5VZM2 374 aa18.69■□□□□ 0.58
SCAMP4-204ENST00000414057 KSR1Q8IVT5 923 aa18.69■□□□□ 0.58
SCAMP4-204ENST00000414057 PGBD4Q96DM1 585 aa18.69■□□□□ 0.58
SCAMP4-204ENST00000414057 MTRQ99707 1265 aa18.69■□□□□ 0.58
SCAMP4-204ENST00000414057 EIF2AK1Q9BQI3 630 aaKnown RBP18.69■□□□□ 0.58
SCAMP4-204ENST00000414057 NGRNQ9NPE2 291 aaKnown RBP18.69■□□□□ 0.58
SCAMP4-204ENST00000414057 RNF19AQ9NV58 838 aa18.69■□□□□ 0.58
SCAMP4-204ENST00000414057 SPG21Q9NZD8 308 aa18.69■□□□□ 0.58
SCAMP4-204ENST00000414057 WRAP73Q9P2S5 460 aaPredicted RBP18.69■□□□□ 0.58
SCAMP4-204ENST00000414057 WDR81Q562E7 1941 aa18.69■□□□□ 0.58
SCAMP4-204ENST00000414057 A0A087X0B3 334 aa18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 MBTPS2O43462 519 aa18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 SLITRK3O94933 977 aa18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 LYPLA2O95372 231 aa18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 SRGAP2CP0DJJ0 459 aa18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 STAT6P42226 847 aa18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 ALDH7A1P49419 539 aaKnown RBP18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 MXD4Q14582 209 aaPredicted RBP18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 EMC2Q15006 297 aa18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 PCBP1Q15365 356 aaKnown RBP eCLIP18.68■□□□□ 0.586e-8■■■■□ 24.7
SCAMP4-204ENST00000414057 SMAD2Q15796 467 aaKnown RBP18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 STX1AQ16623 288 aa18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 CLLU1OSQ5K130 101 aa18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 GLB1LQ6UWU2 654 aa18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 LRRC55Q6ZSA7 311 aa18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 ADGRD2Q7Z7M1 963 aa18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 RBM23Q86U06 439 aaKnown RBP18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 KCTD17Q8N5Z5 321 aa18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 ERMNQ8TAM6 284 aa18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 HELQQ8TDG4 1101 aa18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 TMEM143Q96AN5 459 aa18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 PANK2Q9BZ23 570 aa18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 NT5C3AQ9H0P0 336 aa18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 IFT122Q9HBG6 1241 aa18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 ANKEF1Q9NU02 776 aa18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 FAM105AQ9NUU6 356 aa18.68■□□□□ 0.58
SCAMP4-204ENST00000414057 ZNF623O75123 536 aa18.67■□□□□ 0.58
SCAMP4-204ENST00000414057 TBX10O75333 385 aa18.67■□□□□ 0.58
SCAMP4-204ENST00000414057 SMC2O95347 1197 aa18.67■□□□□ 0.58
SCAMP4-204ENST00000414057 ALADP13716 330 aa18.67■□□□□ 0.58
SCAMP4-204ENST00000414057 COL9A1P20849 921 aa18.67■□□□□ 0.58
SCAMP4-204ENST00000414057 GTF2F1P35269 517 aaKnown RBP eCLIP18.67■□□□□ 0.58
SCAMP4-204ENST00000414057 DLX2Q07687 328 aaPredicted RBP18.67■□□□□ 0.58
SCAMP4-204ENST00000414057 NCBP1Q09161 790 aaKnown RBP18.67■□□□□ 0.58
SCAMP4-204ENST00000414057 LAMTOR4Q0VGL1 99 aa18.67■□□□□ 0.58
SCAMP4-204ENST00000414057 KARSQ15046 597 aaKnown RBP18.67■□□□□ 0.58
SCAMP4-204ENST00000414057 HAUS3Q68CZ6 603 aa18.67■□□□□ 0.58
SCAMP4-204ENST00000414057 ADHFE1Q8IWW8 467 aa18.67■□□□□ 0.58
SCAMP4-204ENST00000414057 CDK5RAP3Q96JB5 506 aa18.67■□□□□ 0.58
SCAMP4-204ENST00000414057 HSD17B14Q9BPX1 270 aa18.67■□□□□ 0.58
SCAMP4-204ENST00000414057 EPHX3Q9H6B9 360 aa18.67■□□□□ 0.58
SCAMP4-204ENST00000414057 GRPEL1Q9HAV7 217 aa18.67■□□□□ 0.58
SCAMP4-204ENST00000414057 ENTPD7Q9NQZ7 604 aa18.67■□□□□ 0.58
SCAMP4-204ENST00000414057 AGPAT5Q9NUQ2 364 aa18.67■□□□□ 0.58
SCAMP4-204ENST00000414057 ANO10Q9NW15 660 aa18.67■□□□□ 0.58
SCAMP4-204ENST00000414057 HCSTQ9UBK5 93 aa18.67■□□□□ 0.58
SCAMP4-204ENST00000414057 STK17AQ9UEE5 414 aa18.67■□□□□ 0.58
SCAMP4-204ENST00000414057 FNDC1Q4ZHG4 1894 aaPredicted RBP18.67■□□□□ 0.58
SCAMP4-204ENST00000414057 PP2D1A8MPX8 630 aa18.66■□□□□ 0.58
SCAMP4-204ENST00000414057 PI4K2BG5E9Z4 385 aa18.66■□□□□ 0.58
SCAMP4-204ENST00000414057 LINC01565O15544 149 aa18.66■□□□□ 0.58
SCAMP4-204ENST00000414057 DGAT1O75907 488 aa18.66■□□□□ 0.58
SCAMP4-204ENST00000414057 ATF7P17544 494 aaPredicted RBP18.66■□□□□ 0.58
SCAMP4-204ENST00000414057 ERVFC1P60507 584 aa18.66■□□□□ 0.58
SCAMP4-204ENST00000414057 TFDP1Q14186 410 aa18.66■□□□□ 0.58
SCAMP4-204ENST00000414057 CLUL1Q15846 466 aa18.66■□□□□ 0.58
SCAMP4-204ENST00000414057 TMEM31Q5JXX7 168 aa18.66■□□□□ 0.58
SCAMP4-204ENST00000414057 NT5DC1Q5TFE4 455 aa18.66■□□□□ 0.58
SCAMP4-204ENST00000414057 TRIML1Q8N9V2 468 aa18.66■□□□□ 0.58
SCAMP4-204ENST00000414057 TCF25Q9BQ70 676 aa18.66■□□□□ 0.58
SCAMP4-204ENST00000414057 CD320Q9NPF0 282 aa18.66■□□□□ 0.58
SCAMP4-204ENST00000414057 POTEMA6NI47 508 aa18.65■□□□□ 0.58
SCAMP4-204ENST00000414057 FSCN2O14926 492 aa18.65■□□□□ 0.58
SCAMP4-204ENST00000414057 EYA4O95677 639 aa18.65■□□□□ 0.58
SCAMP4-204ENST00000414057 XRCC6P12956 609 aaKnown RBP eCLIP18.65■□□□□ 0.58
SCAMP4-204ENST00000414057 CDC25AP30304 524 aa18.65■□□□□ 0.58
SCAMP4-204ENST00000414057 ZP2Q05996 745 aa18.65■□□□□ 0.58
SCAMP4-204ENST00000414057 COASYQ13057 564 aa18.65■□□□□ 0.58
SCAMP4-204ENST00000414057 DUSP6Q16828 381 aa18.65■□□□□ 0.58
SCAMP4-204ENST00000414057 HYIQ5T013 277 aa18.65■□□□□ 0.58
SCAMP4-204ENST00000414057 RNF149Q8NC42 400 aa18.65■□□□□ 0.58
SCAMP4-204ENST00000414057 SNX29Q8TEQ0 813 aa18.65■□□□□ 0.58
SCAMP4-204ENST00000414057 PAGE5Q96GU1 130 aa18.65■□□□□ 0.58
SCAMP4-204ENST00000414057 TMEM169Q96HH4 297 aa18.65■□□□□ 0.58
SCAMP4-204ENST00000414057 MSLNLQ96KJ4 702 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms