RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 SF3A1Q15459 793 aaKnown RBP11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 SLC27A1Q6PCB7 646 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 VPS52Q8N1B4 723 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 EFHBQ8N7U6 833 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 CNNM3Q8NE01 707 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 VN1R2Q8NFZ6 395 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 RABGGTAQ92696 567 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 TMEM169Q96HH4 297 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 CDK5RAP3Q96JB5 506 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 IFT74Q96LB3 600 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 RUSC1Q9BVN2 902 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 NFKBIZQ9BYH8 718 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 FZD8Q9H461 694 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 PRMT7Q9NVM4 692 aaPredicted RBP11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 CLEC1BQ9P126 229 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 LZTS1Q9Y250 596 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 FAN1Q9Y2M0 1017 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 PRG3Q9Y2Y8 225 aaPredicted RBP11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 REV3LO60673 3130 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 LOXHD1Q8IVV2 1947 aa11.25□□□□□ -0.61
NCKIPSD-202ENST00000413374 NPHP3-ACAD11A0A0J9YXS1 232 aa11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 K7ELQ4 463 aaPredicted RBP11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 GLP2RO95838 553 aa11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 SYT1P21579 422 aa11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 CACNB1Q02641 598 aaPredicted RBP11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 COL19A1Q14993 1142 aa11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 PCBP1Q15365 356 aaKnown RBP eCLIP11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 MAPK6Q16659 721 aa11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 DUSP6Q16828 381 aa11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 CDCA2Q69YH5 1023 aaPredicted RBP11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 RINT1Q6NUQ1 792 aa11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 CABP7Q86V35 215 aa11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 FAM178BQ8IXR5 827 aa11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 MRPL43Q8N983 215 aaKnown RBP11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 TMEM87AQ8NBN3 555 aa11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 SPRYD3Q8NCJ5 442 aa11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 KHSRPQ92945 711 aaKnown RBP eCLIP11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 IGSF21Q96ID5 467 aa11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 C2orf40Q9H1Z8 148 aa11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 NGRNQ9NPE2 291 aaKnown RBP11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 UBN1Q9NPG3 1134 aa11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 SNTG2Q9NY99 539 aa11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 KANSL3Q9P2N6 904 aa11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 CD207Q9UJ71 328 aa11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 CLIC4Q9Y696 253 aa11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 CNTNAP2Q9UHC6 1331 aa11.24□□□□□ -0.61
NCKIPSD-202ENST00000413374 C2orf71A6NGG8 1288 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 F8W810 466 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 K7ERI5 159 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 ACKR2O00590 384 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 MBTPS2O43462 519 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 PLA2G4BP0C869 781 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 PDCP20941 246 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 MARCKSP29966 332 aaPredicted RBP11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 UBA7P41226 1012 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 SMC1AQ14683 1233 aaKnown RBP11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 PPP2R5AQ15172 486 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 PUS10Q3MIT2 529 aaKnown RBP11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 SPECC1Q5M775 1068 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 NT5DC1Q5TFE4 455 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 FOXD4L5Q5VV16 416 aaPredicted RBP11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 EEF1DP3Q658K8 133 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 PDE12Q6L8Q7 609 aaKnown RBP11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 PPP4R3CPQ6ZMV5 832 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 C1orf186Q6ZWK4 172 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 TAS1R1Q7RTX1 841 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 BRAPQ7Z569 592 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 DAW1Q8N136 415 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 GJD3Q8N144 294 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 FOXD4L4Q8WXT5 416 aaPredicted RBP11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 KIFAP3Q92845 792 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 CCDC51Q96ER9 411 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 CCDC113Q9H0I3 377 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 CXCL16Q9H2A7 254 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 PDZD7Q9H5P4 517 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 EPHX3Q9H6B9 360 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 CACNG4Q9UBN1 327 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 GDAQ9Y2T3 454 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 GIT1Q9Y2X7 761 aa11.23□□□□□ -0.61
NCKIPSD-202ENST00000413374 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.22□□□□□ -0.61
NCKIPSD-202ENST00000413374 C2CD2LO14523 706 aa11.22□□□□□ -0.61
NCKIPSD-202ENST00000413374 N4BP3O15049 544 aa11.22□□□□□ -0.61
NCKIPSD-202ENST00000413374 SLC16A4O15374 487 aa11.22□□□□□ -0.61
NCKIPSD-202ENST00000413374 CLASP2O75122 1294 aaKnown RBP11.22□□□□□ -0.61
NCKIPSD-202ENST00000413374 MYBP10242 640 aa11.22□□□□□ -0.61
NCKIPSD-202ENST00000413374 NPTX2P47972 431 aa11.22□□□□□ -0.61
NCKIPSD-202ENST00000413374 RESTQ13127 1097 aa11.22□□□□□ -0.61
NCKIPSD-202ENST00000413374 FAM187BQ17R55 369 aa11.22□□□□□ -0.61
NCKIPSD-202ENST00000413374 ARL6IP4Q66PJ3 421 aaKnown RBP11.22□□□□□ -0.61
NCKIPSD-202ENST00000413374 KANK3Q6NY19 840 aa11.22□□□□□ -0.61
NCKIPSD-202ENST00000413374 ZBTB33Q86T24 672 aa11.22□□□□□ -0.61
NCKIPSD-202ENST00000413374 DDX53Q86TM3 631 aaKnown RBP11.22□□□□□ -0.61
NCKIPSD-202ENST00000413374 COLGALT2Q8IYK4 626 aa11.22□□□□□ -0.61
NCKIPSD-202ENST00000413374 HACE1Q8IYU2 909 aa11.22□□□□□ -0.61
NCKIPSD-202ENST00000413374 SYT2Q8N9I0 419 aaPredicted RBP11.22□□□□□ -0.61
NCKIPSD-202ENST00000413374 RASSF8Q8NHQ8 419 aa11.22□□□□□ -0.61
NCKIPSD-202ENST00000413374 MSLNLQ96KJ4 702 aa11.22□□□□□ -0.61
NCKIPSD-202ENST00000413374 PRIMPOLQ96LW4 560 aa11.22□□□□□ -0.61
NCKIPSD-202ENST00000413374 VN1R3Q9BXE9 311 aa11.22□□□□□ -0.61
NCKIPSD-202ENST00000413374 ZBP1Q9H171 429 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms