RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 LRRN2O75325 713 aa18.94■□□□□ 0.62
SDCBP-202ENST00000413219 PYGMP11217 842 aa18.94■□□□□ 0.62
SDCBP-202ENST00000413219 CETN1Q12798 172 aa18.94■□□□□ 0.62
SDCBP-202ENST00000413219 BNIP1Q12981 228 aa18.94■□□□□ 0.62
SDCBP-202ENST00000413219 PPP2R5CQ13362 524 aa18.94■□□□□ 0.62
SDCBP-202ENST00000413219 CDC42EP5Q6NZY7 148 aa18.94■□□□□ 0.62
SDCBP-202ENST00000413219 OTOP1Q7RTM1 612 aa18.94■□□□□ 0.62
SDCBP-202ENST00000413219 UHMK1Q8TAS1 419 aaKnown RBP18.94■□□□□ 0.62
SDCBP-202ENST00000413219 DYDC1Q8WWB3 177 aa18.94■□□□□ 0.62
SDCBP-202ENST00000413219 TBC1D31Q96DN5 1066 aa18.94■□□□□ 0.62
SDCBP-202ENST00000413219 L3MBTL3Q96JM7 780 aaPredicted RBP18.94■□□□□ 0.62
SDCBP-202ENST00000413219 STRA6Q9BX79 667 aa18.94■□□□□ 0.62
SDCBP-202ENST00000413219 LRRC19Q9H756 370 aa18.94■□□□□ 0.62
SDCBP-202ENST00000413219 ECT2Q9H8V3 914 aa18.94■□□□□ 0.62
SDCBP-202ENST00000413219 C15orf41Q9Y2V0 281 aa18.94■□□□□ 0.62
SDCBP-202ENST00000413219 TMEM110-MUSTN1A8MSY1 372 aa18.93■□□□□ 0.62
SDCBP-202ENST00000413219 PIK3CDO00329 1044 aa18.93■□□□□ 0.62
SDCBP-202ENST00000413219 EXOC3O60645 756 aa18.93■□□□□ 0.62
SDCBP-202ENST00000413219 GJB6O95452 261 aa18.93■□□□□ 0.62
SDCBP-202ENST00000413219 ECEL1O95672 775 aa18.93■□□□□ 0.62
SDCBP-202ENST00000413219 MKRN3Q13064 507 aaKnown RBP18.93■□□□□ 0.62
SDCBP-202ENST00000413219 MESDQ14696 234 aa18.93■□□□□ 0.62
SDCBP-202ENST00000413219 HHIPL2Q6UWX4 724 aa18.93■□□□□ 0.62
SDCBP-202ENST00000413219 MIGA2Q7L4E1 593 aa18.93■□□□□ 0.62
SDCBP-202ENST00000413219 PTF1AQ7RTS3 328 aa18.93■□□□□ 0.62
SDCBP-202ENST00000413219 RPUSD2Q8IZ73 545 aaKnown RBP18.93■□□□□ 0.62
SDCBP-202ENST00000413219 TMEM174Q8WUU8 243 aa18.93■□□□□ 0.62
SDCBP-202ENST00000413219 STAMBPL1Q96FJ0 436 aa18.93■□□□□ 0.62
SDCBP-202ENST00000413219 DYDC2Q96IM9 177 aa18.93■□□□□ 0.62
SDCBP-202ENST00000413219 IFT74Q96LB3 600 aa18.93■□□□□ 0.62
SDCBP-202ENST00000413219 MOV10L1Q9BXT6 1211 aaKnown RBP18.93■□□□□ 0.62
SDCBP-202ENST00000413219 CCDC113Q9H0I3 377 aa18.93■□□□□ 0.62
SDCBP-202ENST00000413219 UBE2TQ9NPD8 197 aaPredicted RBP18.93■□□□□ 0.62
SDCBP-202ENST00000413219 ANKRD63C9JTQ0 380 aa18.93■□□□□ 0.62
SDCBP-202ENST00000413219 RAD21O60216 631 aa18.93■□□□□ 0.62
SDCBP-202ENST00000413219 PSMD10O75832 226 aa18.93■□□□□ 0.62
SDCBP-202ENST00000413219 IBSPP21815 317 aaPredicted RBP18.93■□□□□ 0.62
SDCBP-202ENST00000413219 SCP2P22307 547 aa18.93■□□□□ 0.62
SDCBP-202ENST00000413219 HOXA10P31260 410 aaPredicted RBP18.93■□□□□ 0.62
SDCBP-202ENST00000413219 COPS2P61201 443 aa18.93■□□□□ 0.62
SDCBP-202ENST00000413219 ACCSLQ4AC99 568 aa18.93■□□□□ 0.62
SDCBP-202ENST00000413219 INTS8Q75QN2 995 aaKnown RBP18.93■□□□□ 0.62
SDCBP-202ENST00000413219 TPH2Q8IWU9 490 aa18.93■□□□□ 0.62
SDCBP-202ENST00000413219 ARHGEF2Q92974 986 aaKnown RBP18.93■□□□□ 0.62
SDCBP-202ENST00000413219 GMCL1Q96IK5 515 aa18.93■□□□□ 0.62
SDCBP-202ENST00000413219 CDC42EP4Q9H3Q1 356 aaKnown RBP18.93■□□□□ 0.62
SDCBP-202ENST00000413219 NOP53Q9NZM5 478 aaKnown RBP18.93■□□□□ 0.62
SDCBP-202ENST00000413219 USP20Q9Y2K6 914 aa18.93■□□□□ 0.62
SDCBP-202ENST00000413219 ARL2BPQ9Y2Y0 163 aa18.93■□□□□ 0.62
SDCBP-202ENST00000413219 LTBP1Q14766 1721 aa18.92■□□□□ 0.62
SDCBP-202ENST00000413219 TMEM120BA0PK00 339 aa18.92■□□□□ 0.62
SDCBP-202ENST00000413219 TCEA3O75764 348 aa18.92■□□□□ 0.62
SDCBP-202ENST00000413219 RRP1BQ14684 758 aaKnown RBP18.92■□□□□ 0.62
SDCBP-202ENST00000413219 SYDE2Q5VT97 1194 aa18.92■□□□□ 0.62
SDCBP-202ENST00000413219 CERS5Q8N5B7 392 aa18.92■□□□□ 0.62
SDCBP-202ENST00000413219 GMCL1P1Q8NEA9 526 aa18.92■□□□□ 0.62
SDCBP-202ENST00000413219 CYP2W1Q8TAV3 490 aa18.92■□□□□ 0.62
SDCBP-202ENST00000413219 CKAP2Q8WWK9 683 aa18.92■□□□□ 0.62
SDCBP-202ENST00000413219 NACC1Q96RE7 527 aa18.92■□□□□ 0.62
SDCBP-202ENST00000413219 DNAJC18Q9H819 358 aa18.92■□□□□ 0.62
SDCBP-202ENST00000413219 BTAF1O14981 1849 aa18.92■□□□□ 0.62
SDCBP-202ENST00000413219 TCP11X1B4DZS4 312 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 CYP1A2P05177 515 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 CCND1P24385 295 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 EPC2Q52LR7 807 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 ODR4Q5SWX8 454 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 RHBDF2Q6PJF5 856 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 VSTM1Q6UX27 236 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 SYDE1Q6ZW31 735 aaPredicted RBP18.91■□□□□ 0.62
SDCBP-202ENST00000413219 KSR1Q8IVT5 923 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 NSMCE1Q8WV22 266 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 SLC5A5Q92911 643 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 FGFR1OP2Q9NVK5 253 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 CD2APQ9Y5K6 639 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 TCRBV7S2A1N4TA0A589 114 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 LRRC37AA6NMS7 1700 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 ANP32DO95626 131 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 ITIH2P19823 946 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 ALDH5A1P51649 535 aaPredicted RBP18.91■□□□□ 0.62
SDCBP-202ENST00000413219 PRELPP51888 382 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 RWDD2BP57060 319 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 MYO1EQ12965 1108 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 USH1GQ495M9 461 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 CCDC38Q502W7 563 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 LRCH2Q5VUJ6 765 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 RNF207Q6ZRF8 634 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 SPATA21Q7Z572 469 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 ARHGEF19Q8IW93 802 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 AGAP11Q8TF27 550 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 CRAMP1Q96RY5 1269 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 PLVAPQ9BX97 442 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 ARHGEF3Q9NR81 526 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 PRKAG3Q9UGI9 489 aa18.91■□□□□ 0.62
SDCBP-202ENST00000413219 EMSYQ7Z589 1322 aa18.9■□□□□ 0.62
SDCBP-202ENST00000413219 FSCN2O14926 492 aa18.9■□□□□ 0.62
SDCBP-202ENST00000413219 PMM2O15305 246 aa18.9■□□□□ 0.62
SDCBP-202ENST00000413219 SPOPO43791 374 aa18.9■□□□□ 0.62
SDCBP-202ENST00000413219 KCNJ2P63252 427 aa18.9■□□□□ 0.62
SDCBP-202ENST00000413219 LONRF1Q17RB8 773 aa18.9■□□□□ 0.62
SDCBP-202ENST00000413219 FAM98CQ17RN3 349 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms