RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 DUSP28Q4G0W2 176 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 SIAH1Q8IUQ4 282 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 C10orf67Q8IYJ2 551 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 IL31RAQ8NI17 732 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 KIF12Q96FN5 646 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 PANX2Q96RD6 677 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 PRDM5Q9NQX1 630 aaPredicted RBP9.17□□□□□ -0.94
SYNE1-211ENST00000413186 FAM114A2Q9NRY5 505 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 V9GYY5 206 aaPredicted RBP9.17□□□□□ -0.94
SYNE1-211ENST00000413186 EML1O00423 815 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 CLTAP09496 248 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 MYZAPP0CAP1 466 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 GARTP22102 1010 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 ICAM3P32942 547 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 NPTX2P47972 431 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 CLCN3P51790 818 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 RBL2Q08999 1139 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 SETDB1Q15047 1291 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 SNRNP35Q16560 246 aaKnown RBP9.17□□□□□ -0.94
SYNE1-211ENST00000413186 CD302Q8IX05 232 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 TRIM58Q8NG06 486 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 HPS3Q969F9 1004 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 LBHD1Q9BQE6 289 aaPredicted RBP9.17□□□□□ -0.94
SYNE1-211ENST00000413186 RNF208Q9H0X6 261 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 PORCNQ9H237 461 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 PPP2R2CQ9Y2T4 447 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 SYNGAP1Q96PV0 1343 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 MYH13Q9UKX3 1938 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 GSTTP1A0A1W2PQM5 241 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 CAPN9O14815 690 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 P4HA2O15460 535 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 EXTL3O43909 919 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 LRRN2O75325 713 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 ACTN1P12814 892 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 MAP2K2P36507 400 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 THPOP40225 353 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 PLCB3Q01970 1234 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 DLK2Q6UY11 383 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 IFT122Q9HBG6 1241 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 CALCOCO1Q9P1Z2 691 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 DNAJC12Q9UKB3 198 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 CASZ1Q86V15 1759 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 TNRC6CQ9HCJ0 1690 aaKnown RBP9.16□□□□□ -0.94
SYNE1-211ENST00000413186 ZBBXA8MT70 800 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 TRAPPC3O43617 180 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 HSF2BPO75031 334 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 TBC1D8O95759 1140 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 CD4P01730 458 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 CLK2P49760 499 aaKnown RBP9.16□□□□□ -0.94
SYNE1-211ENST00000413186 VAV2P52735 878 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 GLB1LQ6UWU2 654 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 HDXQ7Z353 690 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 PEX26Q7Z412 305 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 TARS2Q9BW92 718 aaKnown RBP9.16□□□□□ -0.94
SYNE1-211ENST00000413186 DDX41Q9UJV9 622 aaKnown RBP9.16□□□□□ -0.94
SYNE1-211ENST00000413186 EMSYQ7Z589 1322 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 A6NNZ2 444 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 TOM1L1O75674 476 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 LYPLA2O95372 231 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 ITGA4P13612 1032 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 BRD2P25440 801 aaKnown RBP9.16□□□□□ -0.94
SYNE1-211ENST00000413186 NOVP48745 357 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 JAG1P78504 1218 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 RBP5P82980 135 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 HADHQ16836 314 aaKnown RBP9.16□□□□□ -0.94
SYNE1-211ENST00000413186 TUBB8Q3ZCM7 444 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 ZC2HC1CQ53FD0 456 aaPredicted RBP9.16□□□□□ -0.94
SYNE1-211ENST00000413186 ZNF467Q7Z7K2 595 aaPredicted RBP9.16□□□□□ -0.94
SYNE1-211ENST00000413186 ZNF410Q86VK4 478 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 RASAL3Q86YV0 1011 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 RPUSD2Q8IZ73 545 aaKnown RBP9.16□□□□□ -0.94
SYNE1-211ENST00000413186 GPR161Q8N6U8 529 aaKnown RBP9.16□□□□□ -0.94
SYNE1-211ENST00000413186 FAM133AQ8N9E0 248 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 SLAIN1Q8ND83 568 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 MAIP1Q8WWC4 291 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 STIM2Q9P246 746 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 BAZ2AQ9UIF9 1905 aaKnown RBP9.16□□□□□ -0.94
SYNE1-211ENST00000413186 NRCAMQ92823 1304 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 OGTO15294 1046 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 ZNF286BP0CG31 522 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 CCDC6Q16204 474 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 RBM43Q6ZSC3 357 aaKnown RBP9.16□□□□□ -0.94
SYNE1-211ENST00000413186 ZNF720Q7Z2F6 126 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 ZNF354CQ86Y25 554 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 OR6B3Q8NGW1 331 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 NRBP1Q9UHY1 535 aa9.16□□□□□ -0.94
SYNE1-211ENST00000413186 SBF2Q86WG5 1849 aa9.15□□□□□ -0.94
SYNE1-211ENST00000413186 EFCAB8A8MWE9 144 aa9.15□□□□□ -0.94
SYNE1-211ENST00000413186 RNF8O76064 485 aa9.15□□□□□ -0.94
SYNE1-211ENST00000413186 GFPT2O94808 682 aa9.15□□□□□ -0.94
SYNE1-211ENST00000413186 PRKAR2AP13861 404 aaKnown RBP9.15□□□□□ -0.94
SYNE1-211ENST00000413186 ABCB4P21439 1286 aa9.15□□□□□ -0.94
SYNE1-211ENST00000413186 TMEM62Q0P6H9 643 aa9.15□□□□□ -0.94
SYNE1-211ENST00000413186 HLTFQ14527 1009 aaKnown RBP eCLIP9.15□□□□□ -0.94
SYNE1-211ENST00000413186 RPS6KA1Q15418 735 aa9.15□□□□□ -0.94
SYNE1-211ENST00000413186 NFRKBQ6P4R8 1299 aa9.15□□□□□ -0.94
SYNE1-211ENST00000413186 AGPAT3Q9NRZ7 376 aa9.15□□□□□ -0.94
SYNE1-211ENST00000413186 MORF4L1Q9UBU8 362 aa9.15□□□□□ -0.94
SYNE1-211ENST00000413186 AMFRQ9UKV5 643 aa9.15□□□□□ -0.94
SYNE1-211ENST00000413186 TLL2Q9Y6L7 1015 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms