RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 GOLGA6L10A0A0M3HER8 536 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 DENND3A2RUS2 1198 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 MIF4GDA9UHW6 222 aaKnown RBP12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 ANKRD63C9JTQ0 380 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 GZMAP12544 262 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 ECHS1P30084 290 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 ADSSP30520 456 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 IRAK1P51617 712 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 SKOR1P84550 965 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 MAP2K1Q02750 393 aaPredicted RBP12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 NBPF12Q5TAG4 269 aaPredicted RBP12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 C11orf63Q6NUN7 778 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 MICALL2Q8IY33 904 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 SCYL3Q8IZE3 742 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 PPM1KQ8N3J5 372 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 ZNF280CQ8ND82 737 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 PARD3BQ8TEW8 1205 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 CCDC127Q96BQ5 260 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 CEP170P1Q96L14 293 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 RNPC3Q96LT9 517 aaKnown RBP12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 TMEM8AQ9HCN3 771 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 COQ4Q9Y3A0 265 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 ALG6Q9Y672 507 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 LRIG3Q6UXM1 1119 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 SAMD7Q7Z3H4 446 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 TMC2Q8TDI7 906 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 EPS8L1Q8TE68 723 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 NSUN6Q8TEA1 469 aaKnown RBP12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 PICK1Q9NRD5 415 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 FAM114A2Q9NRY5 505 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 GABBR1Q9UBS5 961 aa12.39□□□□□ -0.43
TRAFD1-202ENST00000412615 SGPL1O95470 568 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 PSAPP07602 524 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 TBC1D10BQ4KMP7 808 aaPredicted RBP12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 DCAF12L1Q5VU92 463 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 SNRNP48Q6IEG0 339 aaKnown RBP12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 DDX42Q86XP3 938 aaKnown RBP eCLIP12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 UBL4BQ8N7F7 174 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 SEC14L1Q92503 715 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 SHC3Q92529 594 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 KAT5Q92993 513 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 SAAL1Q96ER3 474 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 WNK4Q96J92 1243 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 CDHR1Q96JP9 859 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 RAB17Q9H0T7 212 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 PLAAQ9Y263 795 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 GOLGA6L10A6NI86 522 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 TTI1O43156 1089 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 DGAT1O75907 488 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 GTF2H1P32780 548 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 GMPSP49915 693 aaPredicted RBP12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 GPC3P51654 580 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 PTENP60484 403 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 POU5F1Q01860 360 aaKnown RBP12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 MCPH1Q8NEM0 835 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 MORC4Q8TE76 937 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 MFSD14AQ96MC6 490 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 FBXL18Q96ME1 805 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 KREMEN1Q96MU8 473 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 RPS6KC1Q96S38 1066 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 KIFC3Q9BVG8 833 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 CNOT7Q9UIV1 285 aaKnown RBP12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 ZNF112Q9UJU3 913 aa12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 NOCTQ9UK39 431 aaKnown RBP12.38□□□□□ -0.43
TRAFD1-202ENST00000412615 CYP26A1O43174 497 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 DAPK3O43293 454 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 HSPA6P17066 643 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 CHRNB2P17787 502 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 PTPRAP18433 802 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 DSG3P32926 999 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 HSD17B3P37058 310 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 RTP1P59025 263 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 ENPEPQ07075 957 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 MTMR3Q13615 1198 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 KCTD16Q68DU8 428 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 FOXR1Q6PIV2 292 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 NOP9Q86U38 636 aaKnown RBP12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 FBXL13Q8NEE6 735 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 REPS2Q8NFH8 660 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 POMGNT1Q8WZA1 660 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 SEMA4DQ92854 862 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 NT5C1BQ96P26 610 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 PCDHB18PQ96TA0 734 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 KCNG1Q9UIX4 513 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 SYNGAP1Q96PV0 1343 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 HMGB1P1B2RPK0 211 aaPredicted RBP12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 C19orf81C9J6K1 198 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 NFKBIEO00221 500 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 TULP2O00295 520 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 EIF3HO15372 352 aaKnown RBP eCLIP12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 ZNF862O60290 1169 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 MTA2O94776 668 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 KCNA2P16389 499 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 BRD2P25440 801 aaKnown RBP12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 ABCD1P33897 745 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 GNGT1P63211 74 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 BRDTQ58F21 947 aaPredicted RBP12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 EMC10Q5UCC4 262 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 SWSAP1Q6NVH7 229 aa12.37□□□□□ -0.43
TRAFD1-202ENST00000412615 POTEAQ6S8J7 498 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms