RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 SPG21Q9NZD8 308 aa20.79■□□□□ 0.92
TRIM56-202ENST00000412507 PCDHGC5Q9Y5F6 944 aa20.79■□□□□ 0.92
TRIM56-202ENST00000412507 SRPRBQ9Y5M8 271 aaKnown RBP20.79■□□□□ 0.92
TRIM56-202ENST00000412507 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.78■□□□□ 0.92
TRIM56-202ENST00000412507 DLL1O00548 723 aa20.78■□□□□ 0.92
TRIM56-202ENST00000412507 ACKR2O00590 384 aa20.78■□□□□ 0.92
TRIM56-202ENST00000412507 PLCG1P19174 1290 aa20.78■□□□□ 0.92
TRIM56-202ENST00000412507 GUCY2CP25092 1073 aa20.78■□□□□ 0.92
TRIM56-202ENST00000412507 GTF2F1P35269 517 aaKnown RBP eCLIP20.78■□□□□ 0.921e-10■■□□□ 12.6
TRIM56-202ENST00000412507 PPM1AP35813 382 aa20.78■□□□□ 0.92
TRIM56-202ENST00000412507 NPTX2P47972 431 aa20.78■□□□□ 0.92
TRIM56-202ENST00000412507 ALDH7A1P49419 539 aaKnown RBP20.78■□□□□ 0.92
TRIM56-202ENST00000412507 KCNQ1P51787 676 aa20.78■□□□□ 0.92
TRIM56-202ENST00000412507 ERVFC1P60507 584 aa20.78■□□□□ 0.92
TRIM56-202ENST00000412507 HYAL1Q12794 435 aa20.78■□□□□ 0.92
TRIM56-202ENST00000412507 DHX8Q14562 1220 aaKnown RBP20.78■□□□□ 0.92
TRIM56-202ENST00000412507 AAK1Q2M2I8 961 aa20.78■□□□□ 0.92
TRIM56-202ENST00000412507 USP49Q70CQ1 688 aa20.78■□□□□ 0.92
TRIM56-202ENST00000412507 ZNF280BQ86YH2 543 aa20.78■□□□□ 0.92
TRIM56-202ENST00000412507 SLC39A11Q8N1S5 342 aa20.78■□□□□ 0.92
TRIM56-202ENST00000412507 MRPS27Q92552 414 aaKnown RBP20.78■□□□□ 0.92
TRIM56-202ENST00000412507 EPSTI1Q96J88 318 aa20.78■□□□□ 0.92
TRIM56-202ENST00000412507 CLIC6Q96NY7 704 aa20.78■□□□□ 0.92
TRIM56-202ENST00000412507 TIPINQ9BVW5 301 aa20.78■□□□□ 0.92
TRIM56-202ENST00000412507 PDZD7Q9H5P4 517 aa20.78■□□□□ 0.92
TRIM56-202ENST00000412507 UBN1Q9NPG3 1134 aa20.78■□□□□ 0.92
TRIM56-202ENST00000412507 TLR9Q9NR96 1032 aa20.78■□□□□ 0.92
TRIM56-202ENST00000412507 BLOC1S4Q9NUP1 217 aa20.78■□□□□ 0.92
TRIM56-202ENST00000412507 DNAJB4Q9UDY4 337 aa20.78■□□□□ 0.92
TRIM56-202ENST00000412507 PDCD11Q14690 1871 aaKnown RBP20.77■□□□□ 0.92
TRIM56-202ENST00000412507 TTC28Q96AY4 2481 aa20.77■□□□□ 0.92
TRIM56-202ENST00000412507 NPHP3-ACAD11A0A0J9YXS1 232 aa20.77■□□□□ 0.92
TRIM56-202ENST00000412507 K7ERI5 159 aa20.77■□□□□ 0.92
TRIM56-202ENST00000412507 N4BP3O15049 544 aa20.77■□□□□ 0.92
TRIM56-202ENST00000412507 B4GALT3O60512 393 aa20.77■□□□□ 0.92
TRIM56-202ENST00000412507 POMCP01189 267 aa20.77■□□□□ 0.92
TRIM56-202ENST00000412507 EFNA5P52803 228 aa20.77■□□□□ 0.92
TRIM56-202ENST00000412507 CACNB1Q02641 598 aaPredicted RBP20.77■□□□□ 0.92
TRIM56-202ENST00000412507 DMP1Q13316 513 aaPredicted RBP20.77■□□□□ 0.92
TRIM56-202ENST00000412507 SLC39A14Q15043 492 aa20.77■□□□□ 0.92
TRIM56-202ENST00000412507 EP400NLQ6ZTU2 488 aa20.77■□□□□ 0.92
TRIM56-202ENST00000412507 ADGRD2Q7Z7M1 963 aa20.77■□□□□ 0.92
TRIM56-202ENST00000412507 MICAL1Q8TDZ2 1067 aa20.77■□□□□ 0.92
TRIM56-202ENST00000412507 GAD1Q99259 594 aa20.77■□□□□ 0.92
TRIM56-202ENST00000412507 CCSER1Q9C0I3 900 aa20.77■□□□□ 0.92
TRIM56-202ENST00000412507 IGFLR1Q9H665 355 aa20.77■□□□□ 0.92
TRIM56-202ENST00000412507 LZTS1Q9Y250 596 aa20.77■□□□□ 0.92
TRIM56-202ENST00000412507 VCANP13611 3396 aa20.76■□□□□ 0.91
TRIM56-202ENST00000412507 ARL5CA6NH57 179 aa20.76■□□□□ 0.91
TRIM56-202ENST00000412507 DDHD2O94830 711 aa20.76■□□□□ 0.91
TRIM56-202ENST00000412507 KCNA5P22460 613 aa20.76■□□□□ 0.91
TRIM56-202ENST00000412507 AKAP5P24588 427 aa20.76■□□□□ 0.91
TRIM56-202ENST00000412507 MLH1P40692 756 aa20.76■□□□□ 0.91
TRIM56-202ENST00000412507 KRT17Q04695 432 aa20.76■□□□□ 0.91
TRIM56-202ENST00000412507 MCM6Q14566 821 aa20.76■□□□□ 0.91
TRIM56-202ENST00000412507 ARSHQ5FYA8 562 aa20.76■□□□□ 0.91
TRIM56-202ENST00000412507 NT5DC1Q5TFE4 455 aa20.76■□□□□ 0.91
TRIM56-202ENST00000412507 EEF1DP3Q658K8 133 aa20.76■□□□□ 0.91
TRIM56-202ENST00000412507 GPBP1Q86WP2 473 aa20.76■□□□□ 0.91
TRIM56-202ENST00000412507 HACE1Q8IYU2 909 aa20.76■□□□□ 0.91
TRIM56-202ENST00000412507 SYMPKQ92797 1274 aaKnown RBP20.76■□□□□ 0.91
TRIM56-202ENST00000412507 PABPC5Q96DU9 382 aaKnown RBP20.76■□□□□ 0.91
TRIM56-202ENST00000412507 FAM193BQ96PV7 902 aaPredicted RBP20.76■□□□□ 0.91
TRIM56-202ENST00000412507 KMT5AQ9NQR1 393 aa20.76■□□□□ 0.91
TRIM56-202ENST00000412507 MIOSQ9NXC5 875 aa20.76■□□□□ 0.91
TRIM56-202ENST00000412507 CLDND1Q9NY35 253 aa20.76■□□□□ 0.91
TRIM56-202ENST00000412507 KCND2Q9NZV8 630 aa20.76■□□□□ 0.91
TRIM56-202ENST00000412507 KANSL3Q9P2N6 904 aa20.76■□□□□ 0.91
TRIM56-202ENST00000412507 PUF60Q9UHX1 559 aaKnown RBP20.76■□□□□ 0.91
TRIM56-202ENST00000412507 PHLPP2Q6ZVD8 1323 aa20.76■□□□□ 0.91
TRIM56-202ENST00000412507 GALTP07902 379 aa20.75■□□□□ 0.91
TRIM56-202ENST00000412507 ZSCAN22P10073 491 aaPredicted RBP20.75■□□□□ 0.91
TRIM56-202ENST00000412507 SLC11A1P49279 550 aa20.75■□□□□ 0.91
TRIM56-202ENST00000412507 NASPP49321 788 aaPredicted RBP20.75■□□□□ 0.91
TRIM56-202ENST00000412507 STK38Q15208 465 aa20.75■□□□□ 0.91
TRIM56-202ENST00000412507 PLPP4Q5VZY2 271 aa20.75■□□□□ 0.91
TRIM56-202ENST00000412507 RBM23Q86U06 439 aaKnown RBP20.75■□□□□ 0.91
TRIM56-202ENST00000412507 TMEM173Q86WV6 379 aaPredicted RBP20.75■□□□□ 0.91
TRIM56-202ENST00000412507 RAD54LQ92698 747 aa20.75■□□□□ 0.91
TRIM56-202ENST00000412507 PPP2R3CQ969Q6 453 aa20.75■□□□□ 0.91
TRIM56-202ENST00000412507 ZFP42Q96MM3 310 aa20.75■□□□□ 0.91
TRIM56-202ENST00000412507 ZNF396Q96N95 335 aaPredicted RBP20.75■□□□□ 0.91
TRIM56-202ENST00000412507 C17orf75Q9HAS0 396 aa20.75■□□□□ 0.91
TRIM56-202ENST00000412507 KLK14Q9P0G3 267 aa20.75■□□□□ 0.91
TRIM56-202ENST00000412507 ARHGAP28Q9P2N2 729 aa20.75■□□□□ 0.91
TRIM56-202ENST00000412507 TFIP11Q9UBB9 837 aaKnown RBP20.75■□□□□ 0.91
TRIM56-202ENST00000412507 PARP2Q9UGN5 583 aa20.75■□□□□ 0.91
TRIM56-202ENST00000412507 GIT1Q9Y2X7 761 aa20.75■□□□□ 0.91
TRIM56-202ENST00000412507 FSCN2O14926 492 aa20.74■□□□□ 0.91
TRIM56-202ENST00000412507 INPPL1O15357 1258 aa20.74■□□□□ 0.91
TRIM56-202ENST00000412507 SLC16A4O15374 487 aa20.74■□□□□ 0.91
TRIM56-202ENST00000412507 F13A1P00488 732 aa20.74■□□□□ 0.91
TRIM56-202ENST00000412507 BMP1P13497 986 aa20.74■□□□□ 0.91
TRIM56-202ENST00000412507 PLS3P13797 630 aa20.74■□□□□ 0.91
TRIM56-202ENST00000412507 NRIP1P48552 1158 aa20.74■□□□□ 0.91
TRIM56-202ENST00000412507 SCNN1GP51170 649 aa20.74■□□□□ 0.91
TRIM56-202ENST00000412507 PKP1Q13835 747 aa20.74■□□□□ 0.91
TRIM56-202ENST00000412507 COL19A1Q14993 1142 aa20.74■□□□□ 0.91
TRIM56-202ENST00000412507 FOXD4L6Q3SYB3 417 aaPredicted RBP20.74■□□□□ 0.91
TRIM56-202ENST00000412507 ATF7IP2Q5U623 682 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms