RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 SAMD11Q96NU1 681 aa14.5□□□□□ -0.09
HDAC8-210ENST00000412342 RNF39Q9H2S5 420 aa14.5□□□□□ -0.09
HDAC8-210ENST00000412342 NXF3Q9H4D5 531 aaKnown RBP14.5□□□□□ -0.09
HDAC8-210ENST00000412342 CWH43Q9H720 699 aa14.5□□□□□ -0.09
HDAC8-210ENST00000412342 PTPRHQ9HD43 1115 aa14.5□□□□□ -0.09
HDAC8-210ENST00000412342 FAM13BQ9NYF5 915 aa14.5□□□□□ -0.09
HDAC8-210ENST00000412342 MTUS1Q9ULD2 1270 aa14.5□□□□□ -0.09
HDAC8-210ENST00000412342 KCNH3Q9ULD8 1083 aa14.5□□□□□ -0.09
HDAC8-210ENST00000412342 TDRD15B5MCY1 1934 aaKnown RBP14.49□□□□□ -0.09
HDAC8-210ENST00000412342 A0A1B0GVL5 298 aa14.49□□□□□ -0.09
HDAC8-210ENST00000412342 A0A1W2PQ27 194 aa14.49□□□□□ -0.09
HDAC8-210ENST00000412342 A0A1W2PQ64 194 aa14.49□□□□□ -0.09
HDAC8-210ENST00000412342 A0A1W2PQD8 194 aa14.49□□□□□ -0.09
HDAC8-210ENST00000412342 C5orf67F2Z3F1 127 aa14.49□□□□□ -0.09
HDAC8-210ENST00000412342 N4BP3O15049 544 aa14.49□□□□□ -0.09
HDAC8-210ENST00000412342 INPPL1O15357 1258 aa14.49□□□□□ -0.09
HDAC8-210ENST00000412342 ACTN4O43707 911 aaKnown RBP14.49□□□□□ -0.09
HDAC8-210ENST00000412342 TRAK2O60296 914 aa14.49□□□□□ -0.09
HDAC8-210ENST00000412342 OFD1O75665 1012 aa14.49□□□□□ -0.09
HDAC8-210ENST00000412342 KRT18P05783 430 aaKnown RBP14.49□□□□□ -0.09
HDAC8-210ENST00000412342 PFKFB1P16118 471 aa14.49□□□□□ -0.09
HDAC8-210ENST00000412342 PROZP22891 400 aa14.49□□□□□ -0.09
HDAC8-210ENST00000412342 AFF1P51825 1210 aaKnown RBP14.49□□□□□ -0.09
HDAC8-210ENST00000412342 NCBP1Q09161 790 aaKnown RBP14.49□□□□□ -0.09
HDAC8-210ENST00000412342 LONRF3Q496Y0 759 aa14.49□□□□□ -0.09
HDAC8-210ENST00000412342 CNNM4Q6P4Q7 775 aa14.49□□□□□ -0.09
HDAC8-210ENST00000412342 HAUS6Q7Z4H7 955 aa14.49□□□□□ -0.09
HDAC8-210ENST00000412342 TMEM192Q8IY95 271 aa14.49□□□□□ -0.09
HDAC8-210ENST00000412342 MYCT1Q8N699 235 aa14.49□□□□□ -0.09
HDAC8-210ENST00000412342 CNNM3Q8NE01 707 aa14.49□□□□□ -0.09
HDAC8-210ENST00000412342 ACO2Q99798 780 aaKnown RBP14.49□□□□□ -0.09
HDAC8-210ENST00000412342 TRIM9Q9C026 710 aa14.49□□□□□ -0.09
HDAC8-210ENST00000412342 ST6GALNAC4Q9H4F1 302 aa14.49□□□□□ -0.09
HDAC8-210ENST00000412342 KCNG1Q9UIX4 513 aa14.49□□□□□ -0.09
HDAC8-210ENST00000412342 TNFSF13BQ9Y275 285 aa14.49□□□□□ -0.09
HDAC8-210ENST00000412342 HES2Q9Y543 173 aa14.49□□□□□ -0.09
HDAC8-210ENST00000412342 TBCAO75347 108 aaKnown RBP14.48□□□□□ -0.09
HDAC8-210ENST00000412342 PPP1R37O75864 691 aa14.48□□□□□ -0.09
HDAC8-210ENST00000412342 SLC34A2O95436 690 aa14.48□□□□□ -0.09
HDAC8-210ENST00000412342 NPTXRO95502 500 aa14.48□□□□□ -0.09
HDAC8-210ENST00000412342 LIG1P18858 919 aa14.48□□□□□ -0.09
HDAC8-210ENST00000412342 POU3F3P20264 500 aaPredicted RBP14.48□□□□□ -0.09
HDAC8-210ENST00000412342 BMPR1AP36894 532 aa14.48□□□□□ -0.09
HDAC8-210ENST00000412342 SMTNP53814 917 aa14.48□□□□□ -0.09
HDAC8-210ENST00000412342 ATF7IP2Q5U623 682 aa14.48□□□□□ -0.09
HDAC8-210ENST00000412342 SFR1Q86XK3 245 aa14.48□□□□□ -0.09
HDAC8-210ENST00000412342 LRRC43Q8N309 656 aa14.48□□□□□ -0.09
HDAC8-210ENST00000412342 GDPD5Q8WTR4 605 aa14.48□□□□□ -0.09
HDAC8-210ENST00000412342 RSPH1Q8WYR4 309 aa14.48□□□□□ -0.09
HDAC8-210ENST00000412342 PGBD4Q96DM1 585 aa14.48□□□□□ -0.09
HDAC8-210ENST00000412342 TARS2Q9BW92 718 aaKnown RBP14.48□□□□□ -0.09
HDAC8-210ENST00000412342 STRA6Q9BX79 667 aa14.48□□□□□ -0.09
HDAC8-210ENST00000412342 MRPL4Q9BYD3 311 aaKnown RBP14.48□□□□□ -0.09
HDAC8-210ENST00000412342 GOLPH3LQ9H4A5 285 aa14.48□□□□□ -0.09
HDAC8-210ENST00000412342 RSAD1Q9HA92 442 aa14.48□□□□□ -0.09
HDAC8-210ENST00000412342 MAGEF1Q9HAY2 307 aa14.48□□□□□ -0.09
HDAC8-210ENST00000412342 TSHZ2Q9NRE2 1034 aa14.48□□□□□ -0.09
HDAC8-210ENST00000412342 TYW1Q9NV66 732 aaKnown RBP14.48□□□□□ -0.09
HDAC8-210ENST00000412342 STXBP5LQ9Y2K9 1186 aa14.48□□□□□ -0.09
HDAC8-210ENST00000412342 ZMYM2Q9UBW7 1377 aa14.47□□□□□ -0.09
HDAC8-210ENST00000412342 H3BNC9 293 aa14.47□□□□□ -0.09
HDAC8-210ENST00000412342 K7ENM7 598 aa14.47□□□□□ -0.09
HDAC8-210ENST00000412342 B4GALT3O60512 393 aa14.47□□□□□ -0.09
HDAC8-210ENST00000412342 SCP2P22307 547 aa14.47□□□□□ -0.09
HDAC8-210ENST00000412342 NMT1P30419 496 aaKnown RBP14.47□□□□□ -0.09
HDAC8-210ENST00000412342 CTNNB1P35222 781 aa14.47□□□□□ -0.09
HDAC8-210ENST00000412342 NDUFA8P51970 172 aa14.47□□□□□ -0.09
HDAC8-210ENST00000412342 GTF2BQ00403 316 aa14.47□□□□□ -0.09
HDAC8-210ENST00000412342 ZPBP2Q6X784 338 aa14.47□□□□□ -0.09
HDAC8-210ENST00000412342 FAM178BQ8IXR5 827 aa14.47□□□□□ -0.09
HDAC8-210ENST00000412342 GSTCDQ8NEC7 633 aa14.47□□□□□ -0.09
HDAC8-210ENST00000412342 FBXO22Q8NEZ5 403 aa14.47□□□□□ -0.09
HDAC8-210ENST00000412342 C7orf25Q9BPX7 421 aa14.47□□□□□ -0.09
HDAC8-210ENST00000412342 PYM1Q9BRP8 204 aaKnown RBP14.47□□□□□ -0.09
HDAC8-210ENST00000412342 FGFBP2Q9BYJ0 223 aa14.47□□□□□ -0.09
HDAC8-210ENST00000412342 CDT1Q9H211 546 aa14.47□□□□□ -0.09
HDAC8-210ENST00000412342 OLFML3Q9NRN5 406 aa14.47□□□□□ -0.09
HDAC8-210ENST00000412342 TBC1D13Q9NVG8 400 aa14.47□□□□□ -0.09
HDAC8-210ENST00000412342 CHMP5Q9NZZ3 219 aa14.47□□□□□ -0.09
HDAC8-210ENST00000412342 SEL1LQ9UBV2 794 aa14.47□□□□□ -0.09
HDAC8-210ENST00000412342 SERTAD1Q9UHV2 236 aa14.47□□□□□ -0.09
HDAC8-210ENST00000412342 RWDD3Q9Y3V2 267 aa14.47□□□□□ -0.09
HDAC8-210ENST00000412342 TRIP11Q15643 1979 aa14.47□□□□□ -0.09
HDAC8-210ENST00000412342 PDCD11Q14690 1871 aaKnown RBP14.46□□□□□ -0.09
HDAC8-210ENST00000412342 H0YCG3 227 aa14.46□□□□□ -0.09
HDAC8-210ENST00000412342 PIGRP01833 764 aa14.46□□□□□ -0.09
HDAC8-210ENST00000412342 RB1P06400 928 aa14.46□□□□□ -0.09
HDAC8-210ENST00000412342 SLFN14P0C7P3 912 aa14.46□□□□□ -0.09
HDAC8-210ENST00000412342 ITGA4P13612 1032 aa14.46□□□□□ -0.09
HDAC8-210ENST00000412342 GAP43P17677 238 aa14.46□□□□□ -0.09
HDAC8-210ENST00000412342 CASP1P29466 404 aa14.46□□□□□ -0.09
HDAC8-210ENST00000412342 EHHADHQ08426 723 aa14.46□□□□□ -0.09
HDAC8-210ENST00000412342 DCAF4L1Q3SXM0 396 aa14.46□□□□□ -0.09
HDAC8-210ENST00000412342 ZC2HC1CQ53FD0 456 aaPredicted RBP14.46□□□□□ -0.09
HDAC8-210ENST00000412342 NOMO2Q5JPE7 1267 aa14.46□□□□□ -0.09
HDAC8-210ENST00000412342 GLB1LQ6UWU2 654 aa14.46□□□□□ -0.09
HDAC8-210ENST00000412342 ZNF720Q7Z2F6 126 aa14.46□□□□□ -0.09
HDAC8-210ENST00000412342 MAP4K3Q8IVH8 894 aa14.46□□□□□ -0.09
HDAC8-210ENST00000412342 ABI1Q8IZP0 508 aa14.46□□□□□ -0.09
HDAC8-210ENST00000412342 CEP120Q8N960 986 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms