RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 LAYNQ6UX15 382 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 CNBD1Q8NA66 436 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 FCGR1BQ92637 280 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 GIMAP5Q96F15 307 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 NEDD4LQ96PU5 975 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 DSCC1Q9BVC3 393 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 C1QTNF1Q9BXJ1 281 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 FAM50BQ9Y247 325 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 A0A0G2JPF8 293 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 HNRNPCL3B7ZW38 293 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 HNRNPCL4P0DMR1 293 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 COPS2P61201 443 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 GNGT1P63211 74 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 C1DQ13901 141 aaKnown RBP4.84□□□□□ -1.63
PTPN13-202ENST00000411767 ERICH1Q86X53 443 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 CCDC60Q8IWA6 550 aaPredicted RBP4.84□□□□□ -1.63
PTPN13-202ENST00000411767 IQCF2Q8IXL9 164 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 GTF2A1LQ9UNN4 478 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 PCDHGA4Q9Y5G9 962 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 B8ZZF3 427 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 H0YJX3 145 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 GFPT2O94808 682 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 RCVRNP35243 200 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 AMPD2Q01433 879 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 RHAGQ02094 409 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 CCNG2Q16589 344 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 ZNF574Q6ZN55 896 aaPredicted RBP4.84□□□□□ -1.63
PTPN13-202ENST00000411767 EXOC3L1Q86VI1 746 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 MAGEE2Q8TD90 523 aaPredicted RBP4.84□□□□□ -1.63
PTPN13-202ENST00000411767 COG1Q8WTW3 980 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 ULK4Q96C45 1275 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 TMBIM4Q9HC24 238 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 EML4Q9HC35 981 aaKnown RBP4.84□□□□□ -1.63
PTPN13-202ENST00000411767 CCDC87Q9NVE4 849 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 GGA3Q9NZ52 723 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 PITPNM2Q9BZ72 1349 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 PRPF4O43172 522 aaKnown RBP eCLIP4.84□□□□□ -1.63
PTPN13-202ENST00000411767 AP1G2O75843 785 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 TDP2O95551 362 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 SERPINF2P08697 491 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 MYL2P10916 166 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 SLC5A1P13866 664 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 FDPSP14324 419 aaKnown RBP4.84□□□□□ -1.63
PTPN13-202ENST00000411767 PPP2R1AP30153 589 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 KLC1Q07866 573 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 AASDHQ4L235 1098 aaPredicted RBP4.84□□□□□ -1.63
PTPN13-202ENST00000411767 MZT2BQ6NZ67 158 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 PRR23CQ6ZRP0 262 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.84□□□□□ -1.63
PTPN13-202ENST00000411767 ZBED8Q8IZ13 594 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 EMC1Q8N766 993 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 CLP1Q92989 425 aaKnown RBP4.84□□□□□ -1.63
PTPN13-202ENST00000411767 C12orf66Q96MD2 445 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 LZTS2Q9BRK4 669 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 MAGEB5Q9BZ81 275 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 RERGLQ9H628 205 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 XKR8Q9H6D3 395 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 COPRSQ9NQ92 184 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 WHRNQ9P202 907 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 AMFRQ9UKV5 643 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 INPP5FQ9Y2H2 1132 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 RRP7AQ9Y3A4 280 aaKnown RBP4.84□□□□□ -1.63
PTPN13-202ENST00000411767 ELP1O95163 1332 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 SOS1Q07889 1333 aaPredicted RBP4.84□□□□□ -1.63
PTPN13-202ENST00000411767 H0YCG3 227 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 BCAS1O75363 584 aaPredicted RBP4.84□□□□□ -1.63
PTPN13-202ENST00000411767 PRLP01236 227 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 ZNF18P17022 549 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 NCF2P19878 526 aaPredicted RBP4.84□□□□□ -1.63
PTPN13-202ENST00000411767 AXLP30530 894 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 IARSP41252 1262 aaKnown RBP4.84□□□□□ -1.63
PTPN13-202ENST00000411767 SKIV2L2P42285 1042 aaKnown RBP4.84□□□□□ -1.63
PTPN13-202ENST00000411767 TECP42680 631 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 RAB25P57735 213 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 AP3S2P59780 193 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 NFIAQ12857 509 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 MEA1Q16626 185 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 ERMARDQ5T6L9 678 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 RNF219Q5W0B1 726 aaPredicted RBP4.84□□□□□ -1.63
PTPN13-202ENST00000411767 LRRC69Q6ZNQ3 347 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 MOB1BQ7L9L4 216 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 HS6ST3Q8IZP7 471 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 E2F7Q96AV8 911 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 CCT8L2Q96SF2 557 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 CEP44Q9C0F1 390 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 ROGDIQ9GZN7 287 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 ING4Q9UNL4 249 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 DTNAQ9Y4J8 743 aa4.84□□□□□ -1.63
PTPN13-202ENST00000411767 PTPRCP08575 1304 aa4.84□□□□□ -1.64
PTPN13-202ENST00000411767 ARHGEF35A5YM69 484 aa4.84□□□□□ -1.64
PTPN13-202ENST00000411767 SYNDIG1LA6NDD5 238 aa4.84□□□□□ -1.64
PTPN13-202ENST00000411767 PDGFRBP09619 1106 aa4.84□□□□□ -1.64
PTPN13-202ENST00000411767 ZNF806P0C7X5 589 aa4.84□□□□□ -1.64
PTPN13-202ENST00000411767 PCNAP12004 261 aa4.84□□□□□ -1.64
PTPN13-202ENST00000411767 MLNP12872 115 aa4.84□□□□□ -1.64
PTPN13-202ENST00000411767 EPCAMP16422 314 aa4.84□□□□□ -1.64
PTPN13-202ENST00000411767 SAT1P21673 171 aa4.84□□□□□ -1.64
PTPN13-202ENST00000411767 DDX6P26196 483 aaKnown RBP eCLIP4.84□□□□□ -1.64
PTPN13-202ENST00000411767 GTF2E2P29084 291 aaKnown RBP4.84□□□□□ -1.64
PTPN13-202ENST00000411767 UBE2HP62256 183 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms