RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 XKR9Q5GH70 373 aa15.9■□□□□ 0.14
HLA-DQB2-229ENST00000411527 PPP4R3AQ6IN85 833 aa15.9■□□□□ 0.14
HLA-DQB2-229ENST00000411527 NEK8Q86SG6 692 aa15.9■□□□□ 0.14
HLA-DQB2-229ENST00000411527 FERMT3Q86UX7 667 aa15.9■□□□□ 0.14
HLA-DQB2-229ENST00000411527 C4orf19Q8IY42 314 aa15.9■□□□□ 0.14
HLA-DQB2-229ENST00000411527 COLGALT2Q8IYK4 626 aa15.9■□□□□ 0.14
HLA-DQB2-229ENST00000411527 CMASQ8NFW8 434 aaPredicted RBP15.9■□□□□ 0.14
HLA-DQB2-229ENST00000411527 RTP3Q9BQQ7 232 aa15.9■□□□□ 0.14
HLA-DQB2-229ENST00000411527 LXNQ9BS40 222 aa15.9■□□□□ 0.14
HLA-DQB2-229ENST00000411527 HERC2P3Q9BVR0 1158 aa15.9■□□□□ 0.14
HLA-DQB2-229ENST00000411527 RNF39Q9H2S5 420 aa15.9■□□□□ 0.14
HLA-DQB2-229ENST00000411527 MARCH5Q9NX47 278 aa15.9■□□□□ 0.14
HLA-DQB2-229ENST00000411527 RGL1Q9NZL6 768 aa15.9■□□□□ 0.14
HLA-DQB2-229ENST00000411527 IGSF9Q9P2J2 1179 aa15.9■□□□□ 0.14
HLA-DQB2-229ENST00000411527 IPPQ9Y573 584 aa15.9■□□□□ 0.14
HLA-DQB2-229ENST00000411527 ARID2Q68CP9 1835 aa15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 ARL5CA6NH57 179 aa15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 STK25O00506 426 aa15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 ZBTB39O15060 712 aa15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 NARSO43776 548 aaKnown RBP15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 GAS2O43903 313 aaKnown RBP15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 CCNT1O60563 726 aaKnown RBP15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 N4BP1O75113 896 aaKnown RBP15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 SPATA31D3P0C874 917 aa15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 GCFC2P16383 781 aaKnown RBP15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 GLUD2P49448 558 aa15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 KIAA0319Q5VV43 1072 aa15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 NCAPH2Q6IBW4 605 aa15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 ELMSAN1Q6PJG2 1045 aa15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 SPATA31D4Q6ZUB0 917 aa15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 CCDC105Q8IYK2 499 aa15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 RSAD2Q8WXG1 361 aa15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 HAS1Q92839 578 aa15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 DYDC2Q96IM9 177 aa15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 GAD1Q99259 594 aa15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 PHF20Q9BVI0 1012 aa15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 EIF2AQ9BY44 585 aaKnown RBP15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 WDR6Q9NNW5 1121 aaKnown RBP15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 MIOSQ9NXC5 875 aa15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 DPP7Q9UHL4 492 aa15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 MYO15AQ9UKN7 3530 aa15.89■□□□□ 0.13
HLA-DQB2-229ENST00000411527 MTCL1Q9Y4B5 1905 aaKnown RBP15.88■□□□□ 0.13
HLA-DQB2-229ENST00000411527 TBX3O15119 743 aa15.88■□□□□ 0.13
HLA-DQB2-229ENST00000411527 INPPL1O15357 1258 aa15.88■□□□□ 0.13
HLA-DQB2-229ENST00000411527 TSPAN1O60635 241 aa15.88■□□□□ 0.13
HLA-DQB2-229ENST00000411527 RFPL2O75678 378 aa15.88■□□□□ 0.13
HLA-DQB2-229ENST00000411527 GLUD1P00367 558 aa15.88■□□□□ 0.13
HLA-DQB2-229ENST00000411527 CFHP08603 1231 aa15.88■□□□□ 0.13
HLA-DQB2-229ENST00000411527 AXLP30530 894 aa15.88■□□□□ 0.13
HLA-DQB2-229ENST00000411527 MLH1P40692 756 aa15.88■□□□□ 0.13
HLA-DQB2-229ENST00000411527 NCBP1Q09161 790 aaKnown RBP15.88■□□□□ 0.13
HLA-DQB2-229ENST00000411527 CTTNQ14247 550 aaKnown RBP15.88■□□□□ 0.13
HLA-DQB2-229ENST00000411527 ANGPT1Q15389 498 aa15.88■□□□□ 0.13
HLA-DQB2-229ENST00000411527 CYP26C1Q6V0L0 522 aa15.88■□□□□ 0.13
HLA-DQB2-229ENST00000411527 DTWD2Q8NBA8 298 aa15.88■□□□□ 0.13
HLA-DQB2-229ENST00000411527 STAMQ92783 540 aa15.88■□□□□ 0.13
HLA-DQB2-229ENST00000411527 CPB2Q96IY4 423 aa15.88■□□□□ 0.13
HLA-DQB2-229ENST00000411527 ZFP42Q96MM3 310 aa15.88■□□□□ 0.13
HLA-DQB2-229ENST00000411527 MTRQ99707 1265 aa15.88■□□□□ 0.13
HLA-DQB2-229ENST00000411527 APOL6Q9BWW8 343 aa15.88■□□□□ 0.13
HLA-DQB2-229ENST00000411527 ZSWIM4Q9H7M6 989 aa15.88■□□□□ 0.13
HLA-DQB2-229ENST00000411527 RXFP1Q9HBX9 757 aa15.88■□□□□ 0.13
HLA-DQB2-229ENST00000411527 HES2Q9Y543 173 aa15.88■□□□□ 0.13
HLA-DQB2-229ENST00000411527 F8W810 466 aa15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 INO80B-WBP1J3KQ70 363 aa15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 NR1I2O75469 434 aa15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 EFEMP2O95967 443 aa15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 SCNN1GP51170 649 aa15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 PTENP60484 403 aa15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 FOXK2Q01167 660 aa15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 DSG1Q02413 1049 aa15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 CYP4A11Q02928 519 aa15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 DSC1Q08554 894 aa15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 MXD4Q14582 209 aaPredicted RBP15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 PCBP1Q15365 356 aaKnown RBP eCLIP15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 NOTUMQ6P988 496 aa15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 PIK3AP1Q6ZUJ8 805 aa15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 PALB2Q86YC2 1186 aa15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 POTEDQ86YR6 584 aa15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 TPH2Q8IWU9 490 aa15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 RNF168Q8IYW5 571 aaPredicted RBP15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 ADSSL1Q8N142 457 aa15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 OXER1Q8TDS5 423 aa15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 SMG7Q92540 1137 aaKnown RBP15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 NAP1L4Q99733 375 aaKnown RBP15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 COLEC11Q9BWP8 271 aa15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 CSRNP2Q9H175 543 aa15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 PIDD1Q9HB75 910 aa15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 WNT16Q9UBV4 365 aa15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 CLUHO75153 1309 aa15.87■□□□□ 0.13
HLA-DQB2-229ENST00000411527 RIF1Q5UIP0 2472 aaKnown RBP15.86■□□□□ 0.13
HLA-DQB2-229ENST00000411527 BAG4O95429 457 aaKnown RBP15.86■□□□□ 0.13
HLA-DQB2-229ENST00000411527 XBP1P17861 261 aa15.86■□□□□ 0.13
HLA-DQB2-229ENST00000411527 RFX1P22670 979 aa15.86■□□□□ 0.13
HLA-DQB2-229ENST00000411527 SPIRE1Q08AE8 756 aa15.86■□□□□ 0.13
HLA-DQB2-229ENST00000411527 TFDP1Q14186 410 aa15.86■□□□□ 0.13
HLA-DQB2-229ENST00000411527 SLC44A3Q8N4M1 653 aa15.86■□□□□ 0.13
HLA-DQB2-229ENST00000411527 HDAC7Q8WUI4 952 aa15.86■□□□□ 0.13
HLA-DQB2-229ENST00000411527 ZNF707Q96C28 371 aaPredicted RBP15.86■□□□□ 0.13
HLA-DQB2-229ENST00000411527 CCDC51Q96ER9 411 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms