RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 EMC2Q15006 297 aa18.64■□□□□ 0.57
MRPL55-220ENST00000411464 PCBP1Q15365 356 aaKnown RBP eCLIP18.64■□□□□ 0.57
MRPL55-220ENST00000411464 EPHA7Q15375 998 aa18.64■□□□□ 0.57
MRPL55-220ENST00000411464 XKR9Q5GH70 373 aa18.64■□□□□ 0.57
MRPL55-220ENST00000411464 CWF19L1Q69YN2 538 aaKnown RBP18.64■□□□□ 0.57
MRPL55-220ENST00000411464 CYP26C1Q6V0L0 522 aa18.64■□□□□ 0.57
MRPL55-220ENST00000411464 TAS1R1Q7RTX1 841 aa18.64■□□□□ 0.57
MRPL55-220ENST00000411464 FERMT3Q86UX7 667 aa18.64■□□□□ 0.57
MRPL55-220ENST00000411464 COLGALT2Q8IYK4 626 aa18.64■□□□□ 0.57
MRPL55-220ENST00000411464 SIX5Q8N196 739 aa18.64■□□□□ 0.57
MRPL55-220ENST00000411464 SMG8Q8ND04 991 aaKnown RBP18.64■□□□□ 0.57
MRPL55-220ENST00000411464 STAMQ92783 540 aa18.64■□□□□ 0.57
MRPL55-220ENST00000411464 RTP3Q9BQQ7 232 aa18.64■□□□□ 0.57
MRPL55-220ENST00000411464 LXNQ9BS40 222 aa18.64■□□□□ 0.57
MRPL55-220ENST00000411464 HERC2P3Q9BVR0 1158 aa18.64■□□□□ 0.57
MRPL55-220ENST00000411464 ZSWIM4Q9H7M6 989 aa18.64■□□□□ 0.57
MRPL55-220ENST00000411464 ARL5CA6NH57 179 aa18.63■□□□□ 0.57
MRPL55-220ENST00000411464 CDKL5O76039 1030 aa18.63■□□□□ 0.57
MRPL55-220ENST00000411464 GLUD1P00367 558 aa18.63■□□□□ 0.57
MRPL55-220ENST00000411464 NPR3P17342 541 aa18.63■□□□□ 0.57
MRPL55-220ENST00000411464 AXLP30530 894 aa18.63■□□□□ 0.57
MRPL55-220ENST00000411464 GBP2P32456 591 aaPredicted RBP18.63■□□□□ 0.57
MRPL55-220ENST00000411464 FOXK2Q01167 660 aa18.63■□□□□ 0.57
MRPL55-220ENST00000411464 MXD4Q14582 209 aaPredicted RBP18.63■□□□□ 0.57
MRPL55-220ENST00000411464 NCAPH2Q6IBW4 605 aa18.63■□□□□ 0.57
MRPL55-220ENST00000411464 NOTUMQ6P988 496 aa18.63■□□□□ 0.57
MRPL55-220ENST00000411464 GAD1Q99259 594 aa18.63■□□□□ 0.57
MRPL55-220ENST00000411464 MTRQ99707 1265 aa18.63■□□□□ 0.57
MRPL55-220ENST00000411464 PHF20Q9BVI0 1012 aa18.63■□□□□ 0.57
MRPL55-220ENST00000411464 WDR6Q9NNW5 1121 aaKnown RBP18.63■□□□□ 0.57
MRPL55-220ENST00000411464 RGL1Q9NZL6 768 aa18.63■□□□□ 0.57
MRPL55-220ENST00000411464 IPPQ9Y573 584 aa18.63■□□□□ 0.57
MRPL55-220ENST00000411464 INPPL1O15357 1258 aa18.62■□□□□ 0.57
MRPL55-220ENST00000411464 EPB41L2O43491 1005 aaKnown RBP18.62■□□□□ 0.57
MRPL55-220ENST00000411464 BAG4O95429 457 aaKnown RBP18.62■□□□□ 0.57
MRPL55-220ENST00000411464 MYBP10242 640 aa18.62■□□□□ 0.57
MRPL55-220ENST00000411464 MLH1P40692 756 aa18.62■□□□□ 0.57
MRPL55-220ENST00000411464 TFDP1Q14186 410 aa18.62■□□□□ 0.57
MRPL55-220ENST00000411464 CTTNQ14247 550 aaKnown RBP18.62■□□□□ 0.57
MRPL55-220ENST00000411464 KIAA0319Q5VV43 1072 aa18.62■□□□□ 0.57
MRPL55-220ENST00000411464 PIK3AP1Q6ZUJ8 805 aa18.62■□□□□ 0.57
MRPL55-220ENST00000411464 CCDC105Q8IYK2 499 aa18.62■□□□□ 0.57
MRPL55-220ENST00000411464 HACE1Q8IYU2 909 aa18.62■□□□□ 0.57
MRPL55-220ENST00000411464 HAS1Q92839 578 aa18.62■□□□□ 0.57
MRPL55-220ENST00000411464 CCDC51Q96ER9 411 aa18.62■□□□□ 0.57
MRPL55-220ENST00000411464 DYDC2Q96IM9 177 aa18.62■□□□□ 0.57
MRPL55-220ENST00000411464 COLEC11Q9BWP8 271 aa18.62■□□□□ 0.57
MRPL55-220ENST00000411464 EIF2AQ9BY44 585 aaKnown RBP18.62■□□□□ 0.57
MRPL55-220ENST00000411464 TM6SF1Q9BZW5 370 aa18.62■□□□□ 0.57
MRPL55-220ENST00000411464 TRIM6Q9C030 488 aaPredicted RBP18.62■□□□□ 0.57
MRPL55-220ENST00000411464 RNF39Q9H2S5 420 aa18.62■□□□□ 0.57
MRPL55-220ENST00000411464 MARCH5Q9NX47 278 aa18.62■□□□□ 0.57
MRPL55-220ENST00000411464 PTPRZ1P23471 2315 aaPredicted RBP18.61■□□□□ 0.57
MRPL55-220ENST00000411464 INO80B-WBP1J3KQ70 363 aa18.61■□□□□ 0.57
MRPL55-220ENST00000411464 ZBTB39O15060 712 aa18.61■□□□□ 0.57
MRPL55-220ENST00000411464 TSPAN1O60635 241 aa18.61■□□□□ 0.57
MRPL55-220ENST00000411464 RFX1P22670 979 aa18.61■□□□□ 0.57
MRPL55-220ENST00000411464 PTENP60484 403 aa18.61■□□□□ 0.57
MRPL55-220ENST00000411464 CYP4A11Q02928 519 aa18.61■□□□□ 0.57
MRPL55-220ENST00000411464 ANGPT1Q15389 498 aa18.61■□□□□ 0.57
MRPL55-220ENST00000411464 TPH2Q8IWU9 490 aa18.61■□□□□ 0.57
MRPL55-220ENST00000411464 SLFN12Q8IYM2 578 aa18.61■□□□□ 0.57
MRPL55-220ENST00000411464 DTWD2Q8NBA8 298 aa18.61■□□□□ 0.57
MRPL55-220ENST00000411464 SMG7Q92540 1137 aaKnown RBP18.61■□□□□ 0.57
MRPL55-220ENST00000411464 APOL6Q9BWW8 343 aa18.61■□□□□ 0.57
MRPL55-220ENST00000411464 RHOBTB2Q9BYZ6 727 aa18.61■□□□□ 0.57
MRPL55-220ENST00000411464 CSRNP2Q9H175 543 aa18.61■□□□□ 0.57
MRPL55-220ENST00000411464 RXFP1Q9HBX9 757 aa18.61■□□□□ 0.57
MRPL55-220ENST00000411464 PDRG1Q9NUG6 133 aa18.61■□□□□ 0.57
MRPL55-220ENST00000411464 WNT16Q9UBV4 365 aa18.61■□□□□ 0.57
MRPL55-220ENST00000411464 HES2Q9Y543 173 aa18.61■□□□□ 0.57
MRPL55-220ENST00000411464 NARSO43776 548 aaKnown RBP18.6■□□□□ 0.57
MRPL55-220ENST00000411464 N4BP1O75113 896 aaKnown RBP18.6■□□□□ 0.57
MRPL55-220ENST00000411464 CFHP08603 1231 aa18.6■□□□□ 0.57
MRPL55-220ENST00000411464 SPATA31D3P0C874 917 aa18.6■□□□□ 0.57
MRPL55-220ENST00000411464 SCNN1GP51170 649 aa18.6■□□□□ 0.57
MRPL55-220ENST00000411464 DSG1Q02413 1049 aa18.6■□□□□ 0.57
MRPL55-220ENST00000411464 DSC1Q08554 894 aa18.6■□□□□ 0.57
MRPL55-220ENST00000411464 SPATA31D4Q6ZUB0 917 aa18.6■□□□□ 0.57
MRPL55-220ENST00000411464 PALB2Q86YC2 1186 aa18.6■□□□□ 0.57
MRPL55-220ENST00000411464 RNF168Q8IYW5 571 aaPredicted RBP18.6■□□□□ 0.57
MRPL55-220ENST00000411464 ADSSL1Q8N142 457 aa18.6■□□□□ 0.57
MRPL55-220ENST00000411464 HDAC7Q8WUI4 952 aa18.6■□□□□ 0.57
MRPL55-220ENST00000411464 RSAD2Q8WXG1 361 aa18.6■□□□□ 0.57
MRPL55-220ENST00000411464 NXPE3Q969Y0 559 aa18.6■□□□□ 0.57
MRPL55-220ENST00000411464 CPB2Q96IY4 423 aa18.6■□□□□ 0.57
MRPL55-220ENST00000411464 ZFP42Q96MM3 310 aa18.6■□□□□ 0.57
MRPL55-220ENST00000411464 PLEKHA4Q9H4M7 779 aa18.6■□□□□ 0.57
MRPL55-220ENST00000411464 PIDD1Q9HB75 910 aa18.6■□□□□ 0.57
MRPL55-220ENST00000411464 EPS15L1Q9UBC2 864 aa18.6■□□□□ 0.57
MRPL55-220ENST00000411464 GIT1Q9Y2X7 761 aa18.6■□□□□ 0.57
MRPL55-220ENST00000411464 MYO10Q9HD67 2058 aa18.6■□□□□ 0.57
MRPL55-220ENST00000411464 CLUHO75153 1309 aa18.59■□□□□ 0.57
MRPL55-220ENST00000411464 RFPL2O75678 378 aa18.59■□□□□ 0.57
MRPL55-220ENST00000411464 EFEMP2O95967 443 aa18.59■□□□□ 0.57
MRPL55-220ENST00000411464 POU5F1BQ06416 359 aa18.59■□□□□ 0.57
MRPL55-220ENST00000411464 POTEDQ86YR6 584 aa18.59■□□□□ 0.57
MRPL55-220ENST00000411464 SLC44A3Q8N4M1 653 aa18.59■□□□□ 0.57
MRPL55-220ENST00000411464 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.59■□□□□ 0.57
MRPL55-220ENST00000411464 CHST7Q9NS84 486 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms