RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 ALOX12P18054 663 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 NCF2P19878 526 aaPredicted RBP5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 DDIT3P35638 169 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 SLC1A1P43005 524 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 AFF1P51825 1210 aaKnown RBP5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 ATP1A4Q13733 1029 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 P3H1Q32P28 736 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 EPC2Q52LR7 807 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 HES5Q5TA89 166 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 EGFLAMQ63HQ2 1017 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 FIP1L1Q6UN15 594 aaKnown RBP5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 TOGARAM2Q6ZUX3 1019 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 DSG4Q86SJ6 1040 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 ZNF366Q8N895 744 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 BEST2Q8NFU1 509 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 FAM216AQ8WUB2 273 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 NELFBQ8WX92 580 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 SLC7A3Q8WY07 619 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 ZNF512BQ96KM6 892 aaPredicted RBP5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 TRIM47Q96LD4 638 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 EYA3Q99504 573 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 DESI2Q9BSY9 194 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 MMTAG2Q9BU76 263 aaKnown RBP5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 PUS3Q9BZE2 481 aaKnown RBP5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 ZNF287Q9HBT7 754 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 LUZP4Q9P127 313 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 PDP2Q9P2J9 529 aa5.56□□□□□ -1.52
R3HDM1-204ENST00000410054 NCF1BA6NI72 391 aaPredicted RBP5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 NCF1CA8MVU1 366 aaPredicted RBP5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 H0YJX3 145 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 SPTLC1O15269 473 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 TSPAN6O43657 245 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 ZBTB14O43829 449 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 IFNB1P01574 187 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 KPNA1P52294 538 aaPredicted RBP5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 TMPRSS15P98073 1019 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 STARD3Q14849 445 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 SPDYAQ5MJ70 313 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 SNAP47Q5SQN1 464 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 TTC22Q5TAA0 569 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 KCTD16Q68DU8 428 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 FAM117BQ6P1L5 589 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 MICALL2Q8IY33 904 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 DYDC2Q96IM9 177 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 NUDT12Q9BQG2 462 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 GPATCH1Q9BRR8 931 aaKnown RBP5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 SP140LQ9H930 580 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 ARNT2Q9HBZ2 717 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 BCAP29Q9UHQ4 241 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 ELP1O95163 1332 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 TRPC5OSA6NMA1 111 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 MYO1FO00160 1098 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 OR5F1O95221 314 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 F13A1P00488 732 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 PSMA2P25787 234 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 ETV1P50549 477 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 PHC1P78364 1004 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 EMC2Q15006 297 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 MAPKAPK3Q16644 382 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 PTPN21Q16825 1174 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 TMEM259Q4ZIN3 620 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 C8orf74Q6P047 294 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 LRRC8BQ6P9F7 803 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 ARHGEF18Q6ZSZ5 1173 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 EIF3MQ7L2H7 374 aaKnown RBP5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 BEND5Q7L4P6 421 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 GRAMD2AQ8IUY3 354 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 CROCCP3Q8IVE0 287 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 GRIN3AQ8TCU5 1115 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 LRRC8CQ8TDW0 803 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 DQX1Q8TE96 717 aaKnown RBP5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 CLP1Q92989 425 aaKnown RBP5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 SNF8Q96H20 258 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 CCDC74BQ96LY2 380 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 CORO1BQ9BR76 489 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 UPF3BQ9BZI7 483 aaKnown RBP5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 ANKRD2Q9GZV1 360 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 MARCH7Q9H992 704 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 KLHL11Q9NVR0 708 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 TAB2Q9NYJ8 693 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 PCDHB13Q9Y5F0 798 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 PPP2R3BQ9Y5P8 575 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 GOLGA3Q08378 1498 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 PDLIM1O00151 329 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 DFFAO00273 331 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 LIN7AO14910 233 aaPredicted RBP5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 DNAJB6O75190 326 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 NCAM1P13591 858 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 PBLDP30039 288 aaPredicted RBP5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 CDC25CP30307 473 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 EVI2BP34910 448 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 MAPKAPK2P49137 400 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 AP3M2P53677 418 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 PTK7Q13308 1070 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 NNTQ13423 1086 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 LPIN1Q14693 890 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 NCAPHQ15003 741 aa5.55□□□□□ -1.52
R3HDM1-204ENST00000410054 UGT3A2Q3SY77 523 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms