RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 HNRNPDLO14979 420 aaKnown RBP18.22■□□□□ 0.51
SUMO1-208ENST00000409627 TOM1L1O75674 476 aa18.22■□□□□ 0.51
SUMO1-208ENST00000409627 FGBP02675 491 aa18.22■□□□□ 0.51
SUMO1-208ENST00000409627 BMP6P22004 513 aa18.22■□□□□ 0.51
SUMO1-208ENST00000409627 PROZP22891 400 aa18.22■□□□□ 0.51
SUMO1-208ENST00000409627 HOXD13P35453 343 aa18.22■□□□□ 0.51
SUMO1-208ENST00000409627 PPP1R2P41236 205 aa18.22■□□□□ 0.51
SUMO1-208ENST00000409627 LIG4P49917 911 aa18.22■□□□□ 0.51
SUMO1-208ENST00000409627 TMEM132AQ24JP5 1023 aa18.22■□□□□ 0.51
SUMO1-208ENST00000409627 TMEM240Q5SV17 173 aa18.22■□□□□ 0.51
SUMO1-208ENST00000409627 SLC27A1Q6PCB7 646 aa18.22■□□□□ 0.51
SUMO1-208ENST00000409627 ZNF365Q70YC5 407 aa18.22■□□□□ 0.51
SUMO1-208ENST00000409627 SMYD4Q8IYR2 804 aaPredicted RBP18.22■□□□□ 0.51
SUMO1-208ENST00000409627 ADAM2Q99965 735 aa18.22■□□□□ 0.51
SUMO1-208ENST00000409627 GDF15Q99988 308 aa18.22■□□□□ 0.51
SUMO1-208ENST00000409627 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.22■□□□□ 0.51
SUMO1-208ENST00000409627 PTPRHQ9HD43 1115 aa18.22■□□□□ 0.51
SUMO1-208ENST00000409627 C1orf112Q9NSG2 853 aa18.22■□□□□ 0.51
SUMO1-208ENST00000409627 PTPRSQ13332 1948 aa18.21■□□□□ 0.51
SUMO1-208ENST00000409627 KNOP1Q1ED39 458 aaKnown RBP18.21■□□□□ 0.51
SUMO1-208ENST00000409627 UBXN11Q5T124 520 aa18.21■□□□□ 0.51
SUMO1-208ENST00000409627 EEF1DP3Q658K8 133 aa18.21■□□□□ 0.51
SUMO1-208ENST00000409627 ISM2Q6H9L7 571 aa18.21■□□□□ 0.51
SUMO1-208ENST00000409627 TWF2Q6IBS0 349 aaKnown RBP18.21■□□□□ 0.51
SUMO1-208ENST00000409627 SLC39A4Q6P5W5 647 aa18.21■□□□□ 0.51
SUMO1-208ENST00000409627 RTN4RL1Q86UN2 441 aaPredicted RBP18.21■□□□□ 0.51
SUMO1-208ENST00000409627 SYCP3Q8IZU3 236 aa18.21■□□□□ 0.51
SUMO1-208ENST00000409627 ADPGKQ9BRR6 497 aa18.21■□□□□ 0.51
SUMO1-208ENST00000409627 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.2■□□□□ 0.5
SUMO1-208ENST00000409627 C9IYK1 514 aa18.2■□□□□ 0.5
SUMO1-208ENST00000409627 ENPP3O14638 875 aa18.2■□□□□ 0.5
SUMO1-208ENST00000409627 ABLIM1O14639 778 aa18.2■□□□□ 0.5
SUMO1-208ENST00000409627 LETM1O95202 739 aaPredicted RBP18.2■□□□□ 0.5
SUMO1-208ENST00000409627 SKIP12755 728 aa18.2■□□□□ 0.5
SUMO1-208ENST00000409627 PRCPP42785 496 aa18.2■□□□□ 0.5
SUMO1-208ENST00000409627 RAB27AP51159 221 aa18.2■□□□□ 0.5
SUMO1-208ENST00000409627 SNRPFP62306 86 aaKnown RBP18.2■□□□□ 0.5
SUMO1-208ENST00000409627 DCAF4L1Q3SXM0 396 aa18.2■□□□□ 0.5
SUMO1-208ENST00000409627 MPZL3Q6UWV2 235 aa18.2■□□□□ 0.5
SUMO1-208ENST00000409627 SLC24A5Q71RS6 500 aa18.2■□□□□ 0.5
SUMO1-208ENST00000409627 APBB1IPQ7Z5R6 666 aaPredicted RBP18.2■□□□□ 0.5
SUMO1-208ENST00000409627 CDR2LQ86X02 465 aaPredicted RBP18.2■□□□□ 0.5
SUMO1-208ENST00000409627 NELFCDQ8IXH7 590 aa18.2■□□□□ 0.5
SUMO1-208ENST00000409627 ADSSL1Q8N142 457 aa18.2■□□□□ 0.5
SUMO1-208ENST00000409627 HERVK_113Q902F9 699 aa18.2■□□□□ 0.5
SUMO1-208ENST00000409627 GBP3Q9H0R5 595 aa18.2■□□□□ 0.5
SUMO1-208ENST00000409627 KCTD10Q9H3F6 313 aa18.2■□□□□ 0.5
SUMO1-208ENST00000409627 CGNQ9P2M7 1197 aaKnown RBP18.2■□□□□ 0.5
SUMO1-208ENST00000409627 STYXL1Q9Y6J8 313 aa18.2■□□□□ 0.5
SUMO1-208ENST00000409627 TTC3P53804 2025 aa18.2■□□□□ 0.5
SUMO1-208ENST00000409627 A0A0U1RQF3 1178 aa18.19■□□□□ 0.5
SUMO1-208ENST00000409627 ANKRD63C9JTQ0 380 aa18.19■□□□□ 0.5
SUMO1-208ENST00000409627 TGFB1I1O43294 461 aa18.19■□□□□ 0.5
SUMO1-208ENST00000409627 MCF2P10911 925 aa18.19■□□□□ 0.5
SUMO1-208ENST00000409627 NLRP12P59046 1061 aa18.19■□□□□ 0.5
SUMO1-208ENST00000409627 FAM189BP81408 668 aa18.19■□□□□ 0.5
SUMO1-208ENST00000409627 MCL1Q07820 350 aa18.19■□□□□ 0.5
SUMO1-208ENST00000409627 STIM1Q13586 685 aa18.19■□□□□ 0.5
SUMO1-208ENST00000409627 NOLC1Q14978 699 aaKnown RBP eCLIP18.19■□□□□ 0.5
SUMO1-208ENST00000409627 ZNF568Q3ZCX4 644 aa18.19■□□□□ 0.5
SUMO1-208ENST00000409627 SLFN12LQ6IEE8 588 aa18.19■□□□□ 0.5
SUMO1-208ENST00000409627 OTOP2Q7RTS6 562 aa18.19■□□□□ 0.5
SUMO1-208ENST00000409627 EIF2AQ9BY44 585 aaKnown RBP18.19■□□□□ 0.5
SUMO1-208ENST00000409627 CDT1Q9H211 546 aa18.19■□□□□ 0.5
SUMO1-208ENST00000409627 MTIF3Q9H2K0 278 aaKnown RBP18.19■□□□□ 0.5
SUMO1-208ENST00000409627 IKZF4Q9H2S9 585 aa18.19■□□□□ 0.5
SUMO1-208ENST00000409627 FAM105AQ9NUU6 356 aa18.19■□□□□ 0.5
SUMO1-208ENST00000409627 TYW1Q9NV66 732 aaKnown RBP18.19■□□□□ 0.5
SUMO1-208ENST00000409627 ANKFY1Q9P2R3 1169 aa18.19■□□□□ 0.5
SUMO1-208ENST00000409627 MAPK8IP1Q9UQF2 711 aa18.19■□□□□ 0.5
SUMO1-208ENST00000409627 PDE4DIPQ5VU43 2346 aa18.18■□□□□ 0.5
SUMO1-208ENST00000409627 PPP1R3GB7ZBB8 358 aa18.18■□□□□ 0.5
SUMO1-208ENST00000409627 TISP43B9A030 160 aa18.18■□□□□ 0.5
SUMO1-208ENST00000409627 PDXKO00764 312 aa18.18■□□□□ 0.5
SUMO1-208ENST00000409627 CLDN3O15551 220 aa18.18■□□□□ 0.5
SUMO1-208ENST00000409627 ZNF623O75123 536 aa18.18■□□□□ 0.5
SUMO1-208ENST00000409627 NPTXRO95502 500 aa18.18■□□□□ 0.5
SUMO1-208ENST00000409627 GARTP22102 1010 aa18.18■□□□□ 0.5
SUMO1-208ENST00000409627 BMP8BP34820 402 aa18.18■□□□□ 0.5
SUMO1-208ENST00000409627 WDR5P61964 334 aaKnown RBP18.18■□□□□ 0.5
SUMO1-208ENST00000409627 RASIP1Q5U651 963 aa18.18■□□□□ 0.5
SUMO1-208ENST00000409627 SASS6Q6UVJ0 657 aa18.18■□□□□ 0.5
SUMO1-208ENST00000409627 HS2ST1Q7LGA3 356 aa18.18■□□□□ 0.5
SUMO1-208ENST00000409627 MLKLQ8NB16 471 aa18.18■□□□□ 0.5
SUMO1-208ENST00000409627 GOLGA5Q8TBA6 731 aa18.18■□□□□ 0.5
SUMO1-208ENST00000409627 ZBTB45Q96K62 511 aaPredicted RBP18.18■□□□□ 0.5
SUMO1-208ENST00000409627 TCHPQ9BT92 498 aa18.18■□□□□ 0.5
SUMO1-208ENST00000409627 TRIM6Q9C030 488 aaPredicted RBP18.18■□□□□ 0.5
SUMO1-208ENST00000409627 UBE2OQ9C0C9 1292 aaKnown RBP18.18■□□□□ 0.5
SUMO1-208ENST00000409627 ELAC1Q9H777 363 aaKnown RBP18.18■□□□□ 0.5
SUMO1-208ENST00000409627 RNF216Q9NWF9 866 aaPredicted RBP18.18■□□□□ 0.5
SUMO1-208ENST00000409627 PCDHB2Q9Y5E7 798 aa18.18■□□□□ 0.5
SUMO1-208ENST00000409627 RALGAPA2Q2PPJ7 1873 aa18.18■□□□□ 0.5
SUMO1-208ENST00000409627 A0A0B4J269 797 aa18.17■□□□□ 0.5
SUMO1-208ENST00000409627 PSMA7O14818 248 aa18.17■□□□□ 0.5
SUMO1-208ENST00000409627 AMHP03971 560 aa18.17■□□□□ 0.5
SUMO1-208ENST00000409627 CD44P16070 742 aaKnown RBP18.17■□□□□ 0.5
SUMO1-208ENST00000409627 ADSSP30520 456 aa18.17■□□□□ 0.5
SUMO1-208ENST00000409627 KCNJ6P48051 423 aa18.17■□□□□ 0.5
SUMO1-208ENST00000409627 ZCWPW2Q504Y3 356 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms