RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 TSGA10Q9BZW7 698 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 BRD9Q9H8M2 597 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 SLC24A3Q9HC58 644 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 PFDN4Q9NQP4 134 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 CAMTA1Q9Y6Y1 1673 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 NPTXRO95502 500 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 SLC4A1P02730 911 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 HNRNPCP07910 306 aaKnown RBP eCLIP7.81□□□□□ -1.16
SCN9A-202ENST00000409435 SLC26A2P50443 739 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 C21orf59P57076 290 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 RPL10AP62906 217 aaKnown RBP7.81□□□□□ -1.16
SCN9A-202ENST00000409435 PRKCQQ04759 706 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 GRM4Q14833 912 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 KCNA10Q16322 511 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 KIZQ2M2Z5 673 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 SV2CQ496J9 727 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 PADI6Q6TGC4 694 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 SYT10Q6XYQ8 523 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 NT5C1BQ96P26 610 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 XPO6Q96QU8 1125 aaKnown RBP7.81□□□□□ -1.16
SCN9A-202ENST00000409435 KIF2CQ99661 725 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 UNC93B1Q9H1C4 597 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 UTP6Q9NYH9 597 aaKnown RBP7.81□□□□□ -1.16
SCN9A-202ENST00000409435 PRR23AA6NEV1 266 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 A8MXQ7 604 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 NCK2O43639 380 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 SPOPO43791 374 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 RNF40O75150 1001 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 ASMTLO95671 621 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 PFKMP08237 780 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 MBL2P11226 248 aaPredicted RBP7.81□□□□□ -1.16
SCN9A-202ENST00000409435 PCSK1P29120 753 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 ZNF543Q08ER8 600 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 PRR23CQ6ZRP0 262 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 TTC39CQ8N584 583 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 DNAJB3Q8WWF6 145 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 FBXO28Q9NVF7 368 aa7.81□□□□□ -1.16
SCN9A-202ENST00000409435 RRP15Q9Y3B9 282 aaKnown RBP7.81□□□□□ -1.16
SCN9A-202ENST00000409435 VWA5AO00534 786 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 FOXN1O15353 648 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 THAP12O43422 761 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 EEF1DP29692 281 aaKnown RBP7.8□□□□□ -1.16
SCN9A-202ENST00000409435 PPP4CP60510 307 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 GRIK4Q16099 956 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 RWDD4Q6NW29 188 aaKnown RBP7.8□□□□□ -1.16
SCN9A-202ENST00000409435 KIAA2013Q8IYS2 634 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 SPDYE1Q8NFV5 336 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-202ENST00000409435 MKNK1Q9BUB5 465 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 IRF2BPLQ9H1B7 796 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 PCIF1Q9H4Z3 704 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 SH3GLB2Q9NR46 395 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 PRMT7Q9NVM4 692 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-202ENST00000409435 COPG1Q9Y678 874 aaKnown RBP7.8□□□□□ -1.16
SCN9A-202ENST00000409435 ELP1O95163 1332 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 FAM47DPA6NHR8 397 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 ZNF197O14709 1029 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 PPARGP37231 505 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-202ENST00000409435 TLE2Q04725 743 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 DPYDQ12882 1025 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 ANKRD20A3Q5VUR7 823 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 HS6ST3Q8IZP7 471 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 PPM1KQ8N3J5 372 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 GPR161Q8N6U8 529 aaKnown RBP7.8□□□□□ -1.16
SCN9A-202ENST00000409435 DYDC2Q96IM9 177 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 ATXN3LQ9H3M9 355 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 ZSWIM5Q9P217 1185 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 SERTAD1Q9UHV2 236 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 PTPN22Q9Y2R2 807 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 A0A1B0GW55 424 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 KRT75O95678 551 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 DUX4L2P0CJ85 424 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 DUX4L3P0CJ86 424 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 DUX4L4P0CJ87 422 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 DUX4L5P0CJ88 424 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 DUX4L6P0CJ89 424 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 DUX4L7P0CJ90 424 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 PTK2Q05397 1052 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 SBK1Q52WX2 424 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 SRGAP1Q7Z6B7 1085 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 ZNF274Q96GC6 653 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-202ENST00000409435 DUX4Q9UBX2 424 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 ORC4O43929 436 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 CACNB2Q08289 660 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-202ENST00000409435 GTF2H3Q13889 308 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 OR6B2Q6IFH4 312 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 RIN2Q8WYP3 895 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-202ENST00000409435 GJA10Q969M2 543 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 GFM2Q969S9 779 aaKnown RBP7.8□□□□□ -1.16
SCN9A-202ENST00000409435 ASIC4Q96FT7 647 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 YIPF2Q9BWQ6 316 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 MIR1-1HGQ9H1L0 117 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 A0A087WUV0 522 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-202ENST00000409435 GAS2O43903 313 aaKnown RBP7.8□□□□□ -1.16
SCN9A-202ENST00000409435 SYT1P21579 422 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 TRAPPC10P48553 1259 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 UBXN1Q04323 297 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 MAPRE1Q15691 268 aaKnown RBP7.8□□□□□ -1.16
SCN9A-202ENST00000409435 NT5DC4Q86YG4 428 aa7.8□□□□□ -1.16
SCN9A-202ENST00000409435 OPLAHO14841 1288 aa7.79□□□□□ -1.16
SCN9A-202ENST00000409435 ADCY6O43306 1168 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms