RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 RNASELQ05823 741 aaKnown RBP10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 PPP2R5CQ13362 524 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 CAMK2BQ13554 666 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 COL9A2Q14055 689 aaPredicted RBP10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 GIT2Q14161 759 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 ST3GAL2Q16842 350 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 PLA2G4FQ68DD2 849 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 PPP4R3AQ6IN85 833 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 TMEM173Q86WV6 379 aaPredicted RBP10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 EXOC8Q8IYI6 725 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 TMEM87AQ8NBN3 555 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 FEZF2Q8TBJ5 459 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 PGBD4Q96DM1 585 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 IGSF21Q96ID5 467 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 CEP170P1Q96L14 293 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 NLRP4Q96MN2 994 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 HINFPQ9BQA5 517 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 PHF20Q9BVI0 1012 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 ZBP1Q9H171 429 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 SLKQ9H2G2 1235 aaPredicted RBP10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 POMKQ9H5K3 350 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 IFT122Q9HBG6 1241 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 KCNMB3Q9NPA1 279 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 PDRG1Q9NUG6 133 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 TBC1D13Q9NVG8 400 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 DLL3Q9NYJ7 618 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 VAV3Q9UKW4 847 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 INPP5FQ9Y2H2 1132 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 PPME1Q9Y570 386 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 COL4A3BPQ9Y5P4 624 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 IRAK3Q9Y616 596 aa10.26□□□□□ -0.77
NIF3L1-203ENST00000409129 FAM208BQ5VWN6 2430 aa10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 CDKL5O76039 1030 aa10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 LMNAP02545 664 aaKnown RBP10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 WEE2P0C1S8 567 aa10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 SRGAP2CP0DJJ0 459 aa10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 GCFC2P16383 781 aaKnown RBP10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 RSPO4Q2I0M5 234 aaPredicted RBP10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 RARS2Q5T160 578 aaKnown RBP10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 AGMOQ6ZNB7 445 aa10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 SRGAP1Q7Z6B7 1085 aa10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 MRPL10Q7Z7H8 261 aaKnown RBP10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 NEK8Q86SG6 692 aa10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 UBALD2Q8IYN6 164 aa10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 C12orf76Q8N812 135 aaPredicted RBP10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 SLC22A17Q8WUG5 538 aa10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 BCL7CQ8WUZ0 217 aaPredicted RBP10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 PRPF31Q8WWY3 499 aaKnown RBP10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 AUTS2Q8WXX7 1259 aa10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 SLC7A3Q8WY07 619 aa10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 GBP3Q9H0R5 595 aa10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 DHX33Q9H6R0 707 aaKnown RBP10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 AGPAT5Q9NUQ2 364 aa10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 DZANK1Q9NVP4 752 aa10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 WRAP73Q9P2S5 460 aaPredicted RBP10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 DNAJB4Q9UDY4 337 aa10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 PCDHB2Q9Y5E7 798 aa10.25□□□□□ -0.77
NIF3L1-203ENST00000409129 PATJQ8NI35 1801 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 TBX3O15119 743 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 ASAP2O43150 1006 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 MARCH6O60337 910 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 CCNT1O60563 726 aaKnown RBP10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 ALDH2P05091 517 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 EPCAMP16422 314 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 NPR3P17342 541 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 XBP1P17861 261 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 HOXA11P31270 313 aaPredicted RBP10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 RFC5P40937 340 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 SLC11A1P49279 550 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 CLCN5P51795 746 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 LAMTOR4Q0VGL1 99 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 SCRN1Q12765 414 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 EPHA7Q15375 998 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 ATAT1Q5SQI0 421 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 KANK3Q6NY19 840 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 OTUD6AQ7L8S5 288 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 PPFIBP1Q86W92 1011 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 ZNF280BQ86YH2 543 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 C4orf19Q8IY42 314 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 CCDC105Q8IYK2 499 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 URGCPQ8TCY9 931 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 TMC2Q8TDI7 906 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 PSPC1Q8WXF1 523 aaKnown RBP10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 RIN2Q8WYP3 895 aaPredicted RBP10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 HAS1Q92839 578 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 TMEM143Q96AN5 459 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 NAP1L4Q99733 375 aaKnown RBP10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 VN1R3Q9BXE9 311 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 MINDY3Q9H8M7 445 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 KANSL3Q9P2N6 904 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 STK39Q9UEW8 545 aa10.24□□□□□ -0.77
NIF3L1-203ENST00000409129 RALGAPA1Q6GYQ0 2036 aa10.23□□□□□ -0.77
NIF3L1-203ENST00000409129 PKD1L2Q7Z442 2459 aa10.23□□□□□ -0.77
NIF3L1-203ENST00000409129 DOCK8Q8NF50 2099 aa10.23□□□□□ -0.77
NIF3L1-203ENST00000409129 COL4A3Q01955 1670 aa10.23□□□□□ -0.77
NIF3L1-203ENST00000409129 FASNP49327 2511 aaKnown RBP10.23□□□□□ -0.77
NIF3L1-203ENST00000409129 GAS2O43903 313 aaKnown RBP10.23□□□□□ -0.77
NIF3L1-203ENST00000409129 B4GALT3O60512 393 aa10.23□□□□□ -0.77
NIF3L1-203ENST00000409129 PFKFB2O60825 505 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms