RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 ZMYND15Q9H091 742 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 POLR3FQ9H1D9 316 aaPredicted RBP4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 ST6GALNAC4Q9H4F1 302 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 ATP6V0A4Q9HBG4 840 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 XPNPEP1Q9NQW7 623 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 EXOC7Q9UPT5 735 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 USP20Q9Y2K6 914 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 PARP14Q460N5 1801 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 EMSYQ7Z589 1322 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 SYNGAP1Q96PV0 1343 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 GSTTP1A0A1W2PQM5 241 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 IQCA1LA6NCM1 817 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 LRRN2O75325 713 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 GFPT2O94808 682 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 ADSSP30520 456 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 CHMP4BP1P59074 171 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 PPP3CAQ08209 521 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 MOGSQ13724 837 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 TUBB2AQ13885 445 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 NEDD9Q14511 834 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 SLC18A3Q16572 532 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 MORN1Q5T089 497 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 GPAT2Q6NUI2 795 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 DNAAF5Q86Y56 855 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 CBWD2Q8IUF1 395 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 SLC17A8Q8NDX2 589 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 GOLGA1Q92805 767 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 CCDC127Q96BQ5 260 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 CAPZA3Q96KX2 299 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 MMP19Q99542 508 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 TUBB2BQ9BVA1 445 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 INTS2Q9H0H0 1204 aaKnown RBP4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 LUC7LQ9NQ29 371 aaKnown RBP4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 PDLIM7Q9NR12 457 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 SALL4Q9UJQ4 1053 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 DNAJC12Q9UKB3 198 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 MAFBQ9Y5Q3 323 aaPredicted RBP4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 SAR1BQ9Y6B6 198 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 CAPN6Q9Y6Q1 641 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 ADGRA3Q8IWK6 1321 aa4.33□□□□□ -1.72
LRRTM4-201ENST00000409088 MYH11P35749 1972 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 FAM170AA1A519 330 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 CTAGE15A4D2H0 777 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 HNRNPDLO14979 420 aaKnown RBP4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 FARP2O94887 1054 aaPredicted RBP4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 ATG7O95352 703 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 ADRB2P07550 413 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 CTAGE8P0CG41 777 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 EDNRBP24530 442 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 TCF7P36402 384 aaPredicted RBP4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 STAT1P42224 750 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 STAT5BP51692 787 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 AMPD2Q01433 879 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 CETN1Q12798 172 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 SNAPC2Q13487 334 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 DRAP1Q14919 205 aaPredicted RBP4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 EMC2Q15006 297 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 KIAA0753Q2KHM9 967 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 LDLRAD1Q5T700 205 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 CTAGE6Q86UF2 777 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 PNMA8AQ86V59 439 aaPredicted RBP4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 MAP4K3Q8IVH8 894 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 CTAGE4Q8IX94 777 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 TRIM58Q8NG06 486 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 PLEKHO2Q8TD55 490 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 POMGNT1Q8WZA1 660 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 GLG1Q92896 1179 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 NTPCRQ9BSD7 190 aaKnown RBP4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 PACSIN1Q9BY11 444 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 PORCNQ9H237 461 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 EFCC1Q9HA90 598 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 C17orf75Q9HAS0 396 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 UBE2TQ9NPD8 197 aaPredicted RBP4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 IGSF9BQ9UPX0 1349 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 LRRIQ4A6NIV6 560 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 ZNF185O15231 689 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 PJA2O43164 708 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 ARIH2O95376 493 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 TGFB3P10600 412 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 KLRC1P26715 233 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 MARK3P27448 753 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 JAM2P57087 298 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 SNRPFP62306 86 aaKnown RBP4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 ERVK-9P63128 1117 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 SNRNP35Q16560 246 aaKnown RBP4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 WHAMMP3Q1A5X7 153 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 HSDL1Q3SXM5 330 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 PHLDB3Q6NSJ2 640 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 ALKBH5Q6P6C2 394 aaKnown RBP4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 BRICD5Q6PL45 260 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 RSRC2Q7L4I2 434 aaKnown RBP4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 TRAPPC11Q7Z392 1133 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 FBXO16Q8IX29 292 aaPredicted RBP4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 C12orf56Q8IXR9 622 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 TXLNBQ8N3L3 684 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 SLC7A3Q8WY07 619 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 SEPT1Q8WYJ6 367 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 ALS2CR12Q96Q35 445 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 PSMB7Q99436 277 aa4.32□□□□□ -1.72
LRRTM4-201ENST00000409088 PCYT2Q99447 389 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms