RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 SNX5Q9Y5X3 404 aa18.75■□□□□ 0.59
SMPD4-202ENST00000409031 INO80Q9ULG1 1556 aaPredicted RBP18.75■□□□□ 0.59
SMPD4-202ENST00000409031 POTECB2RU33 542 aa18.75■□□□□ 0.59
SMPD4-202ENST00000409031 SH3BP5O60239 455 aa18.75■□□□□ 0.59
SMPD4-202ENST00000409031 PDE5AO76074 875 aa18.75■□□□□ 0.59
SMPD4-202ENST00000409031 GCLMP48507 274 aa18.75■□□□□ 0.59
SMPD4-202ENST00000409031 CD302Q8IX05 232 aa18.75■□□□□ 0.59
SMPD4-202ENST00000409031 TPCN2Q8NHX9 752 aa18.75■□□□□ 0.59
SMPD4-202ENST00000409031 DYNLL2Q96FJ2 89 aa18.75■□□□□ 0.59
SMPD4-202ENST00000409031 ALG13Q9NP73 1137 aaKnown RBP18.75■□□□□ 0.59
SMPD4-202ENST00000409031 PHTF1Q9UMS5 762 aa18.75■□□□□ 0.59
SMPD4-202ENST00000409031 ATXN2Q99700 1313 aaKnown RBP18.75■□□□□ 0.59
SMPD4-202ENST00000409031 ADCY3O60266 1144 aa18.75■□□□□ 0.59
SMPD4-202ENST00000409031 ZCCHC18P0CG32 403 aa18.75■□□□□ 0.59
SMPD4-202ENST00000409031 NEK2P51955 445 aa18.75■□□□□ 0.59
SMPD4-202ENST00000409031 ZYXQ15942 572 aaKnown RBP18.75■□□□□ 0.59
SMPD4-202ENST00000409031 IRGCQ6NXR0 463 aa18.75■□□□□ 0.59
SMPD4-202ENST00000409031 F8VZ95 297 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 PSMC1P62191 440 aaKnown RBP18.74■□□□□ 0.59
SMPD4-202ENST00000409031 LCA5Q86VQ0 697 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 DNAAF3Q8N9W5 541 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 DDI1Q8WTU0 396 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 ZC3H15Q8WU90 426 aaKnown RBP18.74■□□□□ 0.59
SMPD4-202ENST00000409031 CHMP2BQ9UQN3 213 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 KLHL2O95198 593 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 SARSP49591 514 aaKnown RBP18.74■□□□□ 0.59
SMPD4-202ENST00000409031 ARSEP51690 589 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 CERKLQ49MI3 558 aaPredicted RBP18.74■□□□□ 0.59
SMPD4-202ENST00000409031 SRBD1Q8N5C6 995 aaKnown RBP18.74■□□□□ 0.59
SMPD4-202ENST00000409031 ZNF804BA4D1E1 1349 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 A0A087X0T9 212 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 CCDC195A0A1B0GUA6 201 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 SFI1A8K8P3 1242 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 SLC16A3O15427 465 aaKnown RBP18.74■□□□□ 0.59
SMPD4-202ENST00000409031 MED7O43513 233 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 FAM228BP0C875 321 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 YARSP54577 528 aaKnown RBP18.74■□□□□ 0.59
SMPD4-202ENST00000409031 ALDH18A1P54886 795 aaKnown RBP18.74■□□□□ 0.59
SMPD4-202ENST00000409031 AP3B2Q13367 1082 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 SCARF1Q14162 830 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 NLRP9Q7RTR0 991 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 ZBTB8OSQ8IWT0 167 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 TSEN2Q8NCE0 465 aaKnown RBP18.74■□□□□ 0.59
SMPD4-202ENST00000409031 GLG1Q92896 1179 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 SEC31BQ9NQW1 1179 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 AIPL1Q9NZN9 384 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 ALG6Q9Y672 507 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 POTEB3A0JP26 581 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 STRNO43815 780 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 SUPT3HO75486 399 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 ROR2Q01974 943 aaKnown RBP18.74■□□□□ 0.59
SMPD4-202ENST00000409031 KCNMA1Q12791 1236 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 TCP10Q12799 353 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 ADRM1Q16186 407 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 POTEBQ6S5H4 581 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 RAB44Q7Z6P3 723 aaPredicted RBP18.74■□□□□ 0.59
SMPD4-202ENST00000409031 FAM192AQ9GZU8 254 aa18.74■□□□□ 0.59
SMPD4-202ENST00000409031 TFRCP02786 760 aaKnown RBP18.73■□□□□ 0.59
SMPD4-202ENST00000409031 FNTAP49354 379 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 ZNF844Q08AG5 666 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 TTMPQ5BVD1 217 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 TMEM47Q9BQJ4 181 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 SLC13A1Q9BZW2 595 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 PALMDQ9NP74 551 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 ZNF277Q9NRM2 450 aaPredicted RBP18.73■□□□□ 0.59
SMPD4-202ENST00000409031 PRPSAP2O60256 369 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 PTPN4P29074 926 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 INPP1P49441 399 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 TMEM259Q4ZIN3 620 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 CREG2Q8IUH2 290 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 FOXP4Q8IVH2 680 aaPredicted RBP18.73■□□□□ 0.59
SMPD4-202ENST00000409031 ADA2Q9NZK5 511 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 H3BRJ5 948 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 MAGEA4P43358 317 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 LVRNQ6Q4G3 990 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 EP400NLQ6ZTU2 488 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 ERICH1Q86X53 443 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 EPS8L3Q8TE67 593 aaKnown RBP18.73■□□□□ 0.59
SMPD4-202ENST00000409031 ATXN2LQ8WWM7 1075 aaKnown RBP18.73■□□□□ 0.59
SMPD4-202ENST00000409031 GDF3Q9NR23 364 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 NAGPAQ9UK23 515 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 PCDHA6Q9UN73 950 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 PCDHA8Q9Y5H6 950 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 IL6STP40189 918 aaPredicted RBP18.73■□□□□ 0.59
SMPD4-202ENST00000409031 OCRLQ01968 901 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 MORF4L2Q15014 288 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 TATDN2Q93075 761 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 CNOT7Q9UIV1 285 aaKnown RBP18.73■□□□□ 0.59
SMPD4-202ENST00000409031 LZTS1Q9Y250 596 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 NEU2Q9Y3R4 380 aa18.73■□□□□ 0.59
SMPD4-202ENST00000409031 XDHP47989 1333 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 ZBED4O75132 1171 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 SLC16A2P36021 539 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 MEI1Q5TIA1 1274 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 TTI2Q6NXR4 508 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 FAM20AQ96MK3 541 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 GOLPH3Q9H4A6 298 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 KRT82Q9NSB4 513 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 ARHGAP20Q9P2F6 1191 aa18.72■□□□□ 0.59
SMPD4-202ENST00000409031 CLDN3O15551 220 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms