RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 STYXL1Q9Y6J8 313 aa20.57■□□□□ 0.88
USP39-202ENST00000409025 ZNF233A6NK53 670 aa20.57■□□□□ 0.88
USP39-202ENST00000409025 LRRIQ3A6PVS8 624 aaPredicted RBP20.57■□□□□ 0.88
USP39-202ENST00000409025 EXTL3O43909 919 aa20.57■□□□□ 0.88
USP39-202ENST00000409025 EVI5O60447 810 aa20.57■□□□□ 0.88
USP39-202ENST00000409025 MOCS3O95396 460 aa20.57■□□□□ 0.88
USP39-202ENST00000409025 GTF2H1P32780 548 aa20.57■□□□□ 0.88
USP39-202ENST00000409025 CAPSQ13938 189 aa20.57■□□□□ 0.88
USP39-202ENST00000409025 FAM110CQ1W6H9 321 aa20.57■□□□□ 0.88
USP39-202ENST00000409025 TMEM63BQ5T3F8 832 aa20.57■□□□□ 0.88
USP39-202ENST00000409025 DPP9Q86TI2 863 aa20.57■□□□□ 0.88
USP39-202ENST00000409025 PRPF31Q8WWY3 499 aaKnown RBP20.57■□□□□ 0.88
USP39-202ENST00000409025 JPH2Q9BR39 696 aaPredicted RBP20.57■□□□□ 0.88
USP39-202ENST00000409025 FAM213AQ9BRX8 229 aa20.57■□□□□ 0.88
USP39-202ENST00000409025 TMEM8AQ9HCN3 771 aa20.57■□□□□ 0.88
USP39-202ENST00000409025 USP20Q9Y2K6 914 aa20.57■□□□□ 0.88
USP39-202ENST00000409025 ENC1O14682 589 aa20.56■□□□□ 0.88
USP39-202ENST00000409025 ADCY3O60266 1144 aa20.56■□□□□ 0.88
USP39-202ENST00000409025 GH1P01241 217 aa20.56■□□□□ 0.88
USP39-202ENST00000409025 ATP1A1P05023 1023 aaKnown RBP20.56■□□□□ 0.88
USP39-202ENST00000409025 PNMA6AP0CW24 399 aaPredicted RBP20.56■□□□□ 0.88
USP39-202ENST00000409025 MAP2K1Q02750 393 aaPredicted RBP20.56■□□□□ 0.88
USP39-202ENST00000409025 ARHGAP1Q07960 439 aa20.56■□□□□ 0.88
USP39-202ENST00000409025 ARHGAP44Q17R89 818 aa20.56■□□□□ 0.88
USP39-202ENST00000409025 CST9Q5W186 159 aa20.56■□□□□ 0.88
USP39-202ENST00000409025 PAPD7Q5XG87 772 aaKnown RBP20.56■□□□□ 0.88
USP39-202ENST00000409025 TRAPPC11Q7Z392 1133 aa20.56■□□□□ 0.88
USP39-202ENST00000409025 SRGAP1Q7Z6B7 1085 aa20.56■□□□□ 0.88
USP39-202ENST00000409025 GPR88Q9GZN0 384 aa20.56■□□□□ 0.88
USP39-202ENST00000409025 SUGCTQ9HAC7 445 aa20.56■□□□□ 0.88
USP39-202ENST00000409025 UBE2TQ9NPD8 197 aaPredicted RBP20.56■□□□□ 0.88
USP39-202ENST00000409025 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.56■□□□□ 0.88
USP39-202ENST00000409025 TRPC6Q9Y210 931 aa20.56■□□□□ 0.88
USP39-202ENST00000409025 RBM47A0AV96 593 aaKnown RBP20.55■□□□□ 0.88
USP39-202ENST00000409025 HBP1O60381 514 aa20.55■□□□□ 0.88
USP39-202ENST00000409025 MAPK4P31152 587 aa20.55■□□□□ 0.88
USP39-202ENST00000409025 GRB14Q14449 540 aa20.55■□□□□ 0.88
USP39-202ENST00000409025 MXD4Q14582 209 aaPredicted RBP20.55■□□□□ 0.88
USP39-202ENST00000409025 BMS1Q14692 1282 aaKnown RBP20.55■□□□□ 0.88
USP39-202ENST00000409025 NAB2Q15742 525 aa20.55■□□□□ 0.88
USP39-202ENST00000409025 PLEKHH3Q7Z736 793 aa20.55■□□□□ 0.88
USP39-202ENST00000409025 NOX5Q96PH1 765 aa20.55■□□□□ 0.88
USP39-202ENST00000409025 SAR1BQ9Y6B6 198 aa20.55■□□□□ 0.88
USP39-202ENST00000409025 CAPN6Q9Y6Q1 641 aa20.55■□□□□ 0.88
USP39-202ENST00000409025 ZBTB42B2RXF5 422 aa20.55■□□□□ 0.88
USP39-202ENST00000409025 EFNA5P52803 228 aa20.55■□□□□ 0.88
USP39-202ENST00000409025 HUNKP57058 714 aa20.55■□□□□ 0.88
USP39-202ENST00000409025 DRP2Q13474 957 aa20.55■□□□□ 0.88
USP39-202ENST00000409025 KIAA0753Q2KHM9 967 aa20.55■□□□□ 0.88
USP39-202ENST00000409025 MAMDC4Q6UXC1 1216 aa20.55■□□□□ 0.88
USP39-202ENST00000409025 PSPC1Q8WXF1 523 aaKnown RBP20.55■□□□□ 0.88
USP39-202ENST00000409025 ERAP1Q9NZ08 941 aa20.55■□□□□ 0.88
USP39-202ENST00000409025 NAGPAQ9UK23 515 aa20.55■□□□□ 0.88
USP39-202ENST00000409025 AGO2Q9UKV8 859 aaKnown RBP20.55■□□□□ 0.88
USP39-202ENST00000409025 JRKLQ9Y4A0 524 aa20.55■□□□□ 0.88
USP39-202ENST00000409025 IGKV6-21A0A0C4DH24 114 aa20.54■□□□□ 0.88
USP39-202ENST00000409025 LDHAP00338 332 aaKnown RBP20.54■□□□□ 0.88
USP39-202ENST00000409025 NAP1L1P55209 391 aaKnown RBP20.54■□□□□ 0.88
USP39-202ENST00000409025 ALKBH5Q6P6C2 394 aaKnown RBP20.54■□□□□ 0.88
USP39-202ENST00000409025 ARHGEF19Q8IW93 802 aa20.54■□□□□ 0.88
USP39-202ENST00000409025 GOLGA1Q92805 767 aa20.54■□□□□ 0.88
USP39-202ENST00000409025 MAP7D2Q96T17 732 aa20.54■□□□□ 0.88
USP39-202ENST00000409025 POP1Q99575 1024 aaKnown RBP20.54■□□□□ 0.88
USP39-202ENST00000409025 TARS2Q9BW92 718 aaKnown RBP20.54■□□□□ 0.88
USP39-202ENST00000409025 NMRK2Q9NPI5 230 aa20.54■□□□□ 0.88
USP39-202ENST00000409025 COQ4Q9Y3A0 265 aa20.54■□□□□ 0.88
USP39-202ENST00000409025 DLATP10515 647 aaKnown RBP20.53■□□□□ 0.88
USP39-202ENST00000409025 MATR3P43243 847 aaKnown RBP eCLIP20.53■□□□□ 0.88
USP39-202ENST00000409025 CHMP4BP1P59074 171 aa20.53■□□□□ 0.88
USP39-202ENST00000409025 LAMTOR4Q0VGL1 99 aa20.53■□□□□ 0.88
USP39-202ENST00000409025 RSRC2Q7L4I2 434 aaKnown RBP20.53■□□□□ 0.88
USP39-202ENST00000409025 PDCL2Q8N4E4 241 aa20.53■□□□□ 0.88
USP39-202ENST00000409025 HDAC6Q9UBN7 1215 aa20.53■□□□□ 0.88
USP39-202ENST00000409025 PUF60Q9UHX1 559 aaKnown RBP20.53■□□□□ 0.88
USP39-202ENST00000409025 SALL4Q9UJQ4 1053 aa20.53■□□□□ 0.88
USP39-202ENST00000409025 FOXN3O00409 490 aaPredicted RBP20.53■□□□□ 0.88
USP39-202ENST00000409025 SNAI1O95863 264 aaPredicted RBP20.53■□□□□ 0.88
USP39-202ENST00000409025 MKRN4PQ13434 485 aaPredicted RBP20.53■□□□□ 0.88
USP39-202ENST00000409025 ZBTB8OSQ8IWT0 167 aa20.53■□□□□ 0.88
USP39-202ENST00000409025 LRRC71Q8N4P6 559 aa20.53■□□□□ 0.88
USP39-202ENST00000409025 FBXL13Q8NEE6 735 aa20.53■□□□□ 0.88
USP39-202ENST00000409025 MAML3Q96JK9 1138 aa20.53■□□□□ 0.88
USP39-202ENST00000409025 KATNBL1Q9H079 304 aa20.53■□□□□ 0.88
USP39-202ENST00000409025 ATP8B3O60423 1300 aa20.52■□□□□ 0.88
USP39-202ENST00000409025 BTNL10A8MVZ5 291 aa20.52■□□□□ 0.88
USP39-202ENST00000409025 BUB1O43683 1085 aa20.52■□□□□ 0.88
USP39-202ENST00000409025 LRRN2O75325 713 aa20.52■□□□□ 0.88
USP39-202ENST00000409025 ITGBL1O95965 494 aaPredicted RBP20.52■□□□□ 0.88
USP39-202ENST00000409025 KLRC1P26715 233 aa20.52■□□□□ 0.88
USP39-202ENST00000409025 ADCYAP1R1P41586 468 aa20.52■□□□□ 0.88
USP39-202ENST00000409025 GPC3P51654 580 aa20.52■□□□□ 0.88
USP39-202ENST00000409025 TUBB4BP68371 445 aa20.52■□□□□ 0.88
USP39-202ENST00000409025 KIF22Q14807 665 aa20.52■□□□□ 0.88
USP39-202ENST00000409025 PSMD6Q15008 389 aa20.52■□□□□ 0.88
USP39-202ENST00000409025 TEX35Q5T0J7 233 aa20.52■□□□□ 0.88
USP39-202ENST00000409025 GJC2Q5T442 439 aaPredicted RBP20.52■□□□□ 0.88
USP39-202ENST00000409025 PPTC7Q8NI37 304 aa20.52■□□□□ 0.88
USP39-202ENST00000409025 EMID1Q96A84 441 aaPredicted RBP20.52■□□□□ 0.88
USP39-202ENST00000409025 MSTO1Q9BUK6 570 aa20.52■□□□□ 0.88
USP39-202ENST00000409025 PACSIN1Q9BY11 444 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms