RNA–Protein interactions for RNA: ENST00000409001.5

SSFA2-202, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 4,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-202ENST00000409001 USP38Q8NB14 1042 aa16.79■□□□□ 0.28
SSFA2-202ENST00000409001 LRRN4CLQ8ND94 238 aa16.79■□□□□ 0.28
SSFA2-202ENST00000409001 PRMT1Q99873 361 aaKnown RBP16.79■□□□□ 0.28
SSFA2-202ENST00000409001 JMJD4Q9H9V9 463 aa16.79■□□□□ 0.28
SSFA2-202ENST00000409001 ZHX2Q9Y6X8 837 aa16.79■□□□□ 0.28
SSFA2-202ENST00000409001 A0A087X0T9 212 aa16.79■□□□□ 0.28
SSFA2-202ENST00000409001 PI4K2BG5E9Z4 385 aa16.79■□□□□ 0.28
SSFA2-202ENST00000409001 FAM228BP0C875 321 aa16.79■□□□□ 0.28
SSFA2-202ENST00000409001 PSMC1P62191 440 aaKnown RBP16.79■□□□□ 0.28
SSFA2-202ENST00000409001 STXBP2Q15833 593 aa16.79■□□□□ 0.28
SSFA2-202ENST00000409001 TRAPPC11Q7Z392 1133 aa16.79■□□□□ 0.28
SSFA2-202ENST00000409001 ECT2Q9H8V3 914 aa16.79■□□□□ 0.28
SSFA2-202ENST00000409001 SLC9A2Q9UBY0 812 aa16.79■□□□□ 0.28
SSFA2-202ENST00000409001 GGPS1O95749 300 aa16.79■□□□□ 0.28
SSFA2-202ENST00000409001 SRGAP2BP0DMP2 458 aa16.79■□□□□ 0.28
SSFA2-202ENST00000409001 CHN1P15882 459 aa16.79■□□□□ 0.28
SSFA2-202ENST00000409001 ZNF568Q3ZCX4 644 aa16.79■□□□□ 0.28
SSFA2-202ENST00000409001 C9orf72Q96LT7 481 aa16.79■□□□□ 0.28
SSFA2-202ENST00000409001 RBAKQ9NYW8 714 aaPredicted RBP16.79■□□□□ 0.28
SSFA2-202ENST00000409001 EPS15L1Q9UBC2 864 aa16.79■□□□□ 0.28
SSFA2-202ENST00000409001 SPDYE16A6NNV3 312 aaPredicted RBP16.78■□□□□ 0.28
SSFA2-202ENST00000409001 HAUS5O94927 633 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 KITP10721 976 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 SPDYE2Q495Y8 402 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 SPDL1Q96EA4 605 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 NBPF3Q9H094 633 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 FAM49AQ9H0Q0 323 aaPredicted RBP16.78■□□□□ 0.28
SSFA2-202ENST00000409001 DBR1Q9UK59 544 aaKnown RBP16.78■□□□□ 0.28
SSFA2-202ENST00000409001 ANGPTL2Q9UKU9 493 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 ATP5HO75947 161 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 STX1BP61266 288 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 ITPK1Q13572 414 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 KLHL38Q2WGJ6 581 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 ZC3H18Q86VM9 953 aaKnown RBP16.78■□□□□ 0.28
SSFA2-202ENST00000409001 DNAJC7Q99615 494 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 POLR3FQ9H1D9 316 aaPredicted RBP16.78■□□□□ 0.28
SSFA2-202ENST00000409001 KLHL11Q9NVR0 708 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 HSPBP1Q9NZL4 362 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 MAD2L2Q9UI95 211 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 TBXAS1P24557 533 aaPredicted RBP16.78■□□□□ 0.28
SSFA2-202ENST00000409001 CCNA1P78396 465 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 SP8Q8IXZ3 490 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 FAM167BQ9BTA0 163 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 IP6K2Q9UHH9 426 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 BAZ2BQ9UIF8 2168 aaKnown RBP16.78■□□□□ 0.28
SSFA2-202ENST00000409001 OATP04181 439 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 KCNJ1P48048 391 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 FXR2P51116 673 aaKnown RBP eCLIP16.78■□□□□ 0.289e-16■■■■■ 36.7
SSFA2-202ENST00000409001 ARSEP51690 589 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 SH3BGRP55822 239 aaPredicted RBP16.78■□□□□ 0.28
SSFA2-202ENST00000409001 LONRF1Q17RB8 773 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 ILDR1Q86SU0 546 aaPredicted RBP16.78■□□□□ 0.28
SSFA2-202ENST00000409001 GPD1LQ8N335 351 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 ATL2Q8NHH9 583 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 CHORDC1Q9UHD1 332 aaPredicted RBP16.78■□□□□ 0.28
SSFA2-202ENST00000409001 AGO2Q9UKV8 859 aaKnown RBP16.78■□□□□ 0.28
SSFA2-202ENST00000409001 STRIP2Q9ULQ0 834 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 OVOS2A0A0G2JMS6 1433 aa16.78■□□□□ 0.28
SSFA2-202ENST00000409001 LRRIQ3A6PVS8 624 aaPredicted RBP16.77■□□□□ 0.28
SSFA2-202ENST00000409001 SLC37A4O43826 429 aa16.77■□□□□ 0.28
SSFA2-202ENST00000409001 HSP90AA5PQ58FG0 334 aa16.77■□□□□ 0.28
SSFA2-202ENST00000409001 TTI2Q6NXR4 508 aa16.77■□□□□ 0.28
SSFA2-202ENST00000409001 GJB7Q6PEY0 223 aa16.77■□□□□ 0.28
SSFA2-202ENST00000409001 ENOSF1Q7L5Y1 443 aa16.77■□□□□ 0.28
SSFA2-202ENST00000409001 RTKN2Q8IZC4 609 aa16.77■□□□□ 0.28
SSFA2-202ENST00000409001 TRAIPQ9BWF2 469 aa16.77■□□□□ 0.28
SSFA2-202ENST00000409001 DMGDHQ9UI17 866 aaKnown RBP16.77■□□□□ 0.28
SSFA2-202ENST00000409001 IPO11Q9UI26 975 aaKnown RBP16.77■□□□□ 0.28
SSFA2-202ENST00000409001 YWHABP31946 246 aaKnown RBP16.77■□□□□ 0.28
SSFA2-202ENST00000409001 HSPA9P38646 679 aaKnown RBP16.77■□□□□ 0.28
SSFA2-202ENST00000409001 ART3Q13508 389 aa16.77■□□□□ 0.28
SSFA2-202ENST00000409001 PDZD8Q8NEN9 1154 aa16.77■□□□□ 0.28
SSFA2-202ENST00000409001 MTRQ99707 1265 aa16.77■□□□□ 0.28
SSFA2-202ENST00000409001 ALG13Q9NP73 1137 aaKnown RBP16.77■□□□□ 0.28
SSFA2-202ENST00000409001 ASNSD1Q9NWL6 643 aa16.77■□□□□ 0.28
SSFA2-202ENST00000409001 PCDHA10Q9Y5I2 948 aa16.77■□□□□ 0.28
SSFA2-202ENST00000409001 THOC5Q13769 683 aaKnown RBP16.77■□□□□ 0.27
SSFA2-202ENST00000409001 KLHDC7AQ5VTJ3 777 aa16.77■□□□□ 0.27
SSFA2-202ENST00000409001 CDKAL1Q5VV42 579 aa16.77■□□□□ 0.27
SSFA2-202ENST00000409001 JAMLQ86YT9 394 aa16.77■□□□□ 0.27
SSFA2-202ENST00000409001 PSPC1Q8WXF1 523 aaKnown RBP16.77■□□□□ 0.27
SSFA2-202ENST00000409001 FNDC3AQ9Y2H6 1198 aaKnown RBP16.77■□□□□ 0.27
SSFA2-202ENST00000409001 ALG6Q9Y672 507 aa16.77■□□□□ 0.27
SSFA2-202ENST00000409001 DIP2CQ9Y2E4 1556 aa16.77■□□□□ 0.27
SSFA2-202ENST00000409001 CFAP69A5D8W1 941 aa16.77■□□□□ 0.27
SSFA2-202ENST00000409001 SPECC1L-ADORA2AF8WAN1 911 aa16.77■□□□□ 0.27
SSFA2-202ENST00000409001 CLGNO14967 610 aa16.77■□□□□ 0.27
SSFA2-202ENST00000409001 AGTP01019 485 aa16.77■□□□□ 0.27
SSFA2-202ENST00000409001 PDHA1P08559 390 aa16.77■□□□□ 0.27
SSFA2-202ENST00000409001 ANXA13P27216 316 aa16.77■□□□□ 0.27
SSFA2-202ENST00000409001 COPB2P35606 906 aa16.77■□□□□ 0.27
SSFA2-202ENST00000409001 RC3H1Q5TC82 1133 aaKnown RBP16.77■□□□□ 0.27
SSFA2-202ENST00000409001 FAF1Q9UNN5 650 aaPredicted RBP16.77■□□□□ 0.27
SSFA2-202ENST00000409001 ARFIP2P53365 341 aa16.76■□□□□ 0.27
SSFA2-202ENST00000409001 SEC23AQ15436 765 aa16.76■□□□□ 0.27
SSFA2-202ENST00000409001 SMAD1Q15797 465 aaKnown RBP16.76■□□□□ 0.27
SSFA2-202ENST00000409001 C4orf50Q6ZRC1 276 aa16.76■□□□□ 0.27
SSFA2-202ENST00000409001 PIP4K2CQ8TBX8 421 aa16.76■□□□□ 0.27
SSFA2-202ENST00000409001 SLC13A1Q9BZW2 595 aa16.76■□□□□ 0.27
SSFA2-202ENST00000409001 STOML1Q9UBI4 398 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms