RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 DHX38Q92620 1227 aaKnown RBP12.81□□□□□ -0.36
PCNX4-204ENST00000406949 KCND2Q9NZV8 630 aa12.81□□□□□ -0.36
PCNX4-204ENST00000406949 WDR46O15213 610 aaKnown RBP12.81□□□□□ -0.36
PCNX4-204ENST00000406949 ATP9AO75110 1047 aa12.81□□□□□ -0.36
PCNX4-204ENST00000406949 NPM3O75607 178 aaKnown RBP12.81□□□□□ -0.36
PCNX4-204ENST00000406949 UGCGQ16739 394 aa12.81□□□□□ -0.36
PCNX4-204ENST00000406949 SEPT14Q6ZU15 432 aa12.81□□□□□ -0.36
PCNX4-204ENST00000406949 MSL3Q8N5Y2 521 aaKnown RBP12.81□□□□□ -0.36
PCNX4-204ENST00000406949 ZNF564Q8TBZ8 553 aaPredicted RBP12.81□□□□□ -0.36
PCNX4-204ENST00000406949 ZKSCAN4Q969J2 545 aaPredicted RBP12.81□□□□□ -0.36
PCNX4-204ENST00000406949 AGO4Q9HCK5 861 aaKnown RBP12.81□□□□□ -0.36
PCNX4-204ENST00000406949 FAM169AQ9Y6X4 670 aa12.81□□□□□ -0.36
PCNX4-204ENST00000406949 COMTP21964 271 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 KCNJ1P48048 391 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 MAGOHP61326 146 aaKnown RBP12.8□□□□□ -0.36
PCNX4-204ENST00000406949 EP400NLQ6ZTU2 488 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 GSTA5Q7RTV2 222 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 SLC47A2Q86VL8 602 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 ACTRT1Q8TDG2 376 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 ATP6V0A1Q93050 837 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 MMEP08473 750 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 TMOD1P28289 359 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 CNGA1P29973 690 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 MAPK4P31152 587 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 MMP14P50281 582 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 KRT39Q6A163 491 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 DEFB132Q7Z7B7 95 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 MGARPQ8TDB4 240 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 SLITRK6Q9H5Y7 841 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 CNOT8Q9UFF9 292 aaKnown RBP12.8□□□□□ -0.36
PCNX4-204ENST00000406949 FEZ2Q9UHY8 353 aaPredicted RBP12.8□□□□□ -0.36
PCNX4-204ENST00000406949 ANAPC7Q9UJX3 599 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 SBF2Q86WG5 1849 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 ZMYM2Q9UBW7 1377 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 HMGB1P1B2RPK0 211 aaPredicted RBP12.8□□□□□ -0.36
PCNX4-204ENST00000406949 CCND2P30279 289 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 PIK3CAP42336 1068 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 IFT88Q13099 833 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 ALCAMQ13740 583 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 B4GALNT4Q76KP1 1039 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 DEPTORQ8TB45 409 aa12.8□□□□□ -0.36
PCNX4-204ENST00000406949 VCAM1P19320 739 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 NF2P35240 595 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 IFNAR2P48551 515 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 MARCKSL1P49006 195 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 KRT76Q01546 638 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 DAW1Q8N136 415 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 ANKRD35Q8N283 1001 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 LRRC57Q8N9N7 239 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 CNKSR2Q8WXI2 1034 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 KRT35Q92764 455 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 C18orf8Q96DM3 657 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 NR2E1Q9Y466 385 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 PCDHA10Q9Y5I2 948 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 SMCHD1A6NHR9 2005 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 RGS16O15492 202 aaPredicted RBP12.79□□□□□ -0.36
PCNX4-204ENST00000406949 NR3C2P08235 984 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 ANXA13P27216 316 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 ACOT2P49753 483 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 JAK3P52333 1124 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 JAM2P57087 298 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 TAS1R2Q8TE23 839 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 PPM1EQ8WY54 764 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 ZNF668Q96K58 619 aaPredicted RBP12.79□□□□□ -0.36
PCNX4-204ENST00000406949 CALR3Q96L12 384 aaKnown RBP12.79□□□□□ -0.36
PCNX4-204ENST00000406949 HEMGNQ9BXL5 484 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 IMPG2Q9BZV3 1241 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 TMEM117Q9H0C3 514 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 UBE4BO95155 1302 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 ANKRD63C9JTQ0 380 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 HGSO14964 777 aaPredicted RBP12.79□□□□□ -0.36
PCNX4-204ENST00000406949 LSP1P33241 339 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 FLT3P36888 993 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 NPTX2P47972 431 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 DPH6Q7L8W6 267 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 MICALL2Q8IY33 904 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 FBXL13Q8NEE6 735 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 C1orf54Q8WWF1 131 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 INTUQ9ULD6 942 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 ATRNL1Q5VV63 1379 aa12.79□□□□□ -0.36
PCNX4-204ENST00000406949 NSFP46459 744 aaKnown RBP12.78□□□□□ -0.36
PCNX4-204ENST00000406949 PLCB3Q01970 1234 aa12.78□□□□□ -0.36
PCNX4-204ENST00000406949 ADCY1Q08828 1119 aa12.78□□□□□ -0.36
PCNX4-204ENST00000406949 SGO2Q562F6 1265 aa12.78□□□□□ -0.36
PCNX4-204ENST00000406949 CCDC137Q6PK04 289 aaKnown RBP12.78□□□□□ -0.36
PCNX4-204ENST00000406949 CCDC121Q6ZUS5 278 aa12.78□□□□□ -0.36
PCNX4-204ENST00000406949 HOOK3Q86VS8 718 aa12.78□□□□□ -0.36
PCNX4-204ENST00000406949 TMEM143Q96AN5 459 aa12.78□□□□□ -0.36
PCNX4-204ENST00000406949 MRRFQ96E11 262 aaKnown RBP12.78□□□□□ -0.36
PCNX4-204ENST00000406949 FAM118BQ9BPY3 351 aa12.78□□□□□ -0.36
PCNX4-204ENST00000406949 PDCD2LQ9BRP1 358 aa12.78□□□□□ -0.36
PCNX4-204ENST00000406949 PAGR1Q9BTK6 254 aa12.78□□□□□ -0.36
PCNX4-204ENST00000406949 KCNK9Q9NPC2 374 aa12.78□□□□□ -0.36
PCNX4-204ENST00000406949 PIM2Q9P1W9 311 aa12.78□□□□□ -0.36
PCNX4-204ENST00000406949 CAPN7Q9Y6W3 813 aa12.78□□□□□ -0.36
PCNX4-204ENST00000406949 SYNGAP1Q96PV0 1343 aa12.78□□□□□ -0.36
PCNX4-204ENST00000406949 ADAMTSL1Q8N6G6 1762 aa12.78□□□□□ -0.36
PCNX4-204ENST00000406949 ADRB2P07550 413 aa12.78□□□□□ -0.36
PCNX4-204ENST00000406949 VIMP08670 466 aaKnown RBP12.78□□□□□ -0.36
PCNX4-204ENST00000406949 MRPS9P82933 396 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms